RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 HMGN1P05114 100 aa2.55□□□□□ -2
SSR1-209ENST00000488834 ERCC1P07992 297 aaPredicted RBP2.55□□□□□ -2
SSR1-209ENST00000488834 PLEKP08567 350 aaPredicted RBP2.55□□□□□ -2
SSR1-209ENST00000488834 MCF2P10911 925 aa2.55□□□□□ -2
SSR1-209ENST00000488834 LAMC1P11047 1609 aa2.55□□□□□ -2
SSR1-209ENST00000488834 MYH8P13535 1937 aa2.55□□□□□ -2
SSR1-209ENST00000488834 ETS2P15036 469 aa2.55□□□□□ -2
SSR1-209ENST00000488834 ATF6P18850 670 aa2.55□□□□□ -2
SSR1-209ENST00000488834 TNNI1P19237 187 aa2.55□□□□□ -2
SSR1-209ENST00000488834 GNA11P29992 359 aa2.55□□□□□ -2
SSR1-209ENST00000488834 HTR1FP30939 366 aa2.55□□□□□ -2
SSR1-209ENST00000488834 LCN1P31025 176 aa2.55□□□□□ -2
SSR1-209ENST00000488834 HOXA6P31267 233 aa2.55□□□□□ -2
SSR1-209ENST00000488834 CASP14P31944 242 aa2.55□□□□□ -2
SSR1-209ENST00000488834 IFNA8P32881 189 aa2.55□□□□□ -2
SSR1-209ENST00000488834 NUDT1P36639 197 aa2.55□□□□□ -2
SSR1-209ENST00000488834 HSPA9P38646 679 aaKnown RBP2.55□□□□□ -2
SSR1-209ENST00000488834 LEPP41159 167 aa2.55□□□□□ -2
SSR1-209ENST00000488834 SLC1A1P43005 524 aa2.55□□□□□ -2
SSR1-209ENST00000488834 HSPA13P48723 471 aa2.55□□□□□ -2
SSR1-209ENST00000488834 DAP3P51398 398 aaKnown RBP2.55□□□□□ -2
SSR1-209ENST00000488834 ATP1B3P54709 279 aa2.55□□□□□ -2
SSR1-209ENST00000488834 PRPS1P60891 318 aa2.55□□□□□ -2
SSR1-209ENST00000488834 YWHAGP61981 247 aaKnown RBP eCLIP2.55□□□□□ -2
SSR1-209ENST00000488834 IRF8Q02556 426 aa2.55□□□□□ -2
SSR1-209ENST00000488834 BST2Q10589 180 aaKnown RBP2.55□□□□□ -2
SSR1-209ENST00000488834 NUP160Q12769 1436 aa2.55□□□□□ -2
SSR1-209ENST00000488834 SMARCB1Q12824 385 aa2.55□□□□□ -2
SSR1-209ENST00000488834 CDC20Q12834 499 aa2.55□□□□□ -2
SSR1-209ENST00000488834 NAIPQ13075 1403 aa2.55□□□□□ -2
SSR1-209ENST00000488834 UNC119Q13432 240 aa2.55□□□□□ -2
SSR1-209ENST00000488834 GPR176Q14439 515 aa2.55□□□□□ -2
SSR1-209ENST00000488834 TP53I3Q53FA7 332 aa2.55□□□□□ -2
SSR1-209ENST00000488834 TFDP3Q5H9I0 405 aa2.55□□□□□ -2
SSR1-209ENST00000488834 CLVS2Q5SYC1 327 aa2.55□□□□□ -2
SSR1-209ENST00000488834 SPECC1LQ69YQ0 1117 aa2.55□□□□□ -2
SSR1-209ENST00000488834 OR4F3Q6IEY1 312 aa2.55□□□□□ -2
SSR1-209ENST00000488834 C4orf22Q6V702 233 aa2.55□□□□□ -2
SSR1-209ENST00000488834 HSDL2Q6YN16 418 aa2.55□□□□□ -2
SSR1-209ENST00000488834 IDO2Q6ZQW0 420 aa2.55□□□□□ -2
SSR1-209ENST00000488834 ACOT7LQ6ZUV0 252 aa2.55□□□□□ -2
SSR1-209ENST00000488834 USP50Q70EL3 339 aaPredicted RBP2.55□□□□□ -2
SSR1-209ENST00000488834 DHDDSQ86SQ9 333 aa2.55□□□□□ -2
SSR1-209ENST00000488834 SLC35F2Q8IXU6 374 aa2.55□□□□□ -2
SSR1-209ENST00000488834 MICU2Q8IYU8 434 aa2.55□□□□□ -2
SSR1-209ENST00000488834 FAM58AQ8N1B3 248 aa2.55□□□□□ -2
SSR1-209ENST00000488834 FAM71E2Q8N5Q1 922 aa2.55□□□□□ -2
SSR1-209ENST00000488834 FAM86B1Q8N7N1 296 aa2.55□□□□□ -2
SSR1-209ENST00000488834 SDR9C7Q8NEX9 313 aa2.55□□□□□ -2
SSR1-209ENST00000488834 OR4C5Q8NGB2 326 aa2.55□□□□□ -2
SSR1-209ENST00000488834 OR4A15Q8NGL6 344 aa2.55□□□□□ -2
SSR1-209ENST00000488834 OR4D5Q8NGN0 318 aa2.55□□□□□ -2
SSR1-209ENST00000488834 OR10Z1Q8NGY1 313 aa2.55□□□□□ -2
SSR1-209ENST00000488834 CDC26Q8NHZ8 85 aa2.55□□□□□ -2
SSR1-209ENST00000488834 RHEBL1Q8TAI7 183 aa2.55□□□□□ -2
SSR1-209ENST00000488834 NDNFQ8TB73 568 aa2.55□□□□□ -2
SSR1-209ENST00000488834 LRRC20Q8TCA0 184 aa2.55□□□□□ -2
SSR1-209ENST00000488834 BLOC1S5Q8TDH9 187 aa2.55□□□□□ -2
SSR1-209ENST00000488834 CD300LFQ8TDQ1 290 aa2.55□□□□□ -2
SSR1-209ENST00000488834 NRGNQ92686 78 aa2.55□□□□□ -2
SSR1-209ENST00000488834 MYDGFQ969H8 173 aa2.55□□□□□ -2
SSR1-209ENST00000488834 SLC38A4Q969I6 547 aa2.55□□□□□ -2
SSR1-209ENST00000488834 TOP1MTQ969P6 601 aa2.55□□□□□ -2
SSR1-209ENST00000488834 C10orf35Q96D05 121 aa2.55□□□□□ -2
SSR1-209ENST00000488834 PELI1Q96FA3 418 aa2.55□□□□□ -2
SSR1-209ENST00000488834 PGLYRP4Q96LB8 373 aa2.55□□□□□ -2
SSR1-209ENST00000488834 OLFM3Q96PB7 478 aa2.55□□□□□ -2
SSR1-209ENST00000488834 TRNT1Q96Q11 434 aaKnown RBP2.55□□□□□ -2
SSR1-209ENST00000488834 TGS1Q96RS0 853 aaKnown RBP2.55□□□□□ -2
SSR1-209ENST00000488834 COPS8Q99627 209 aa2.55□□□□□ -2
SSR1-209ENST00000488834 TSG101Q99816 390 aa2.55□□□□□ -2
SSR1-209ENST00000488834 C20orf24Q9BUV8 137 aa2.55□□□□□ -2
SSR1-209ENST00000488834 BBS2Q9BXC9 721 aa2.55□□□□□ -2
SSR1-209ENST00000488834 CALN1Q9BXU9 219 aa2.55□□□□□ -2
SSR1-209ENST00000488834 IL22Q9GZX6 179 aa2.55□□□□□ -2
SSR1-209ENST00000488834 NXF3Q9H4D5 531 aaKnown RBP2.55□□□□□ -2
SSR1-209ENST00000488834 SLC25A22Q9H936 323 aa2.55□□□□□ -2
SSR1-209ENST00000488834 IL26Q9NPH9 171 aa2.55□□□□□ -2
SSR1-209ENST00000488834 GID8Q9NWU2 228 aa2.55□□□□□ -2
SSR1-209ENST00000488834 B3GNT2Q9NY97 397 aa2.55□□□□□ -2
SSR1-209ENST00000488834 TAS2R7Q9NYW3 318 aa2.55□□□□□ -2
SSR1-209ENST00000488834 IL36GQ9NZH8 169 aa2.55□□□□□ -2
SSR1-209ENST00000488834 ITSN2Q9NZM3 1697 aa2.55□□□□□ -2
SSR1-209ENST00000488834 PSMC3IPQ9P2W1 217 aaPredicted RBP2.55□□□□□ -2
SSR1-209ENST00000488834 ZNF225Q9UK10 706 aa2.55□□□□□ -2
SSR1-209ENST00000488834 PITPNC1Q9UKF7 332 aa2.55□□□□□ -2
SSR1-209ENST00000488834 DDX19BQ9UMR2 479 aa2.55□□□□□ -2
SSR1-209ENST00000488834 SHANK2Q9UPX8 1470 aa2.55□□□□□ -2
SSR1-209ENST00000488834 MEMO1Q9Y316 297 aa2.55□□□□□ -2
SSR1-209ENST00000488834 AK6Q9Y3D8 172 aaKnown RBP2.55□□□□□ -2
SSR1-209ENST00000488834 NPTNQ9Y639 398 aa2.55□□□□□ -2
SSR1-209ENST00000488834 CHD4Q14839 1912 aa2.54□□□□□ -2
SSR1-209ENST00000488834 MYH4Q9Y623 1939 aa2.54□□□□□ -2
SSR1-209ENST00000488834 KIF14Q15058 1648 aa2.54□□□□□ -2
SSR1-209ENST00000488834 ABCC8Q09428 1581 aa2.54□□□□□ -2
SSR1-209ENST00000488834 CFAP74Q9C0B2 1584 aa2.54□□□□□ -2
SSR1-209ENST00000488834 FAM135AQ9P2D6 1515 aa2.54□□□□□ -2
SSR1-209ENST00000488834 SBNO1A3KN83 1393 aa2.54□□□□□ -2
SSR1-209ENST00000488834 SMIM31A0A1B0GVY4 71 aa2.54□□□□□ -2
SSR1-209ENST00000488834 MIF4GDA9UHW6 222 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms