RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 RAMP1O60894 148 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 GPANK1O95872 356 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 ACTL6AO96019 429 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 RAF1P04049 648 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 QDPRP09417 244 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 PTBP1P26599 531 aaKnown RBP eCLIP10.4□□□□□ -0.74
GGPS1-205ENST00000482013 TNFSF8P32971 234 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 GUCA1AP43080 201 aaPredicted RBP10.4□□□□□ -0.74
GGPS1-205ENST00000482013 CSNK1A1P48729 337 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 MEOX1P50221 254 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 LSM6P62312 80 aaKnown RBP10.4□□□□□ -0.74
GGPS1-205ENST00000482013 PPP3R1P63098 170 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 PLGLB1Q02325 96 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 CDC20Q12834 499 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 CLN3Q13286 438 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 VASH2Q86V25 355 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 WDFY1Q8IWB7 410 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 MCHR2Q969V1 340 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 OR2M2Q96R28 347 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 SLC30A2Q9BRI3 323 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 SRXN1Q9BYN0 137 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 NIPAL2Q9H841 368 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 FRRS1LQ9P0K9 344 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 ADAM30Q9UKF2 790 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 UGT2A1Q9Y4X1 527 aa10.4□□□□□ -0.74
GGPS1-205ENST00000482013 ALPK2Q86TB3 2170 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 USP34Q70CQ2 3546 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 WDR87Q6ZQQ6 2873 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 IGKV1D-43A0A0B4J1Z2 117 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 ISPDA4D126 451 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 ACOT7O00154 380 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 GPR171O14626 319 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 CXCL13O43927 109 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 CYTIPO60759 359 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 SLC19A2O60779 497 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 RPP14O95059 124 aaKnown RBP10.39□□□□□ -0.75
GGPS1-205ENST00000482013 ZFPL1O95159 310 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 MPZL1O95297 269 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 F10P00742 488 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 PSKH1P11801 424 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 RAB3BP20337 219 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 CALRP27797 417 aaKnown RBP10.39□□□□□ -0.75
GGPS1-205ENST00000482013 CLDN20P56880 219 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 NANOS3P60323 173 aaKnown RBP10.39□□□□□ -0.75
GGPS1-205ENST00000482013 ARG2P78540 354 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 SLC10A1Q14973 349 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 ZNF181Q2M3W8 571 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 Q499Y3 187 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 ZNF766Q5HY98 468 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 ATP1A1-AS1Q5TC04 95 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 LRFN4Q6PJG9 635 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 METAP1DQ6UB28 335 aaPredicted RBP10.39□□□□□ -0.75
GGPS1-205ENST00000482013 GALNTL5Q7Z4T8 443 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 DCXRQ7Z4W1 244 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 C20orf196Q8IYI0 205 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 TMEM123Q8N131 208 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 PARP16Q8N5Y8 322 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 MEIOBQ8N635 442 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 TMEM251Q8N6I4 163 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 ZIC4Q8N9L1 334 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 MINDY2Q8NBR6 621 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 OR6N1Q8NGY5 312 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 OR2AJ1Q8NGZ0 328 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 OR10D3Q8NH80 312 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 GPR148Q8TDV2 347 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 ST7LQ8TDW4 575 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 RNF133Q8WVZ7 376 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 C11orf40Q8WZ69 217 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 TMEM45BQ96B21 275 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 C4orf45Q96LM5 186 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 UCN2Q96RP3 112 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 AMELYQ99218 206 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 ATF6BQ99941 703 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 PDCD1LG2Q9BQ51 273 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 CCDC32Q9BV29 185 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.39□□□□□ -0.75
GGPS1-205ENST00000482013 C1orf198Q9H425 327 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 CCDC86Q9H6F5 360 aaKnown RBP10.39□□□□□ -0.75
GGPS1-205ENST00000482013 RNF122Q9H9V4 155 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 CYB5R1Q9UHQ9 305 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 FOXD3Q9UJU5 478 aaPredicted RBP10.39□□□□□ -0.75
GGPS1-205ENST00000482013 CDV3Q9UKY7 258 aaKnown RBP10.39□□□□□ -0.75
GGPS1-205ENST00000482013 FLVCR1Q9Y5Y0 555 aa10.39□□□□□ -0.75
GGPS1-205ENST00000482013 VPS13AQ96RL7 3174 aa10.38□□□□□ -0.75
GGPS1-205ENST00000482013 IGKV3D-15A0A087WSY6 115 aa10.38□□□□□ -0.75
GGPS1-205ENST00000482013 A0A1W2PPL8 197 aa10.38□□□□□ -0.75
GGPS1-205ENST00000482013 SHISA3A0PJX4 238 aa10.38□□□□□ -0.75
GGPS1-205ENST00000482013 A6NL46 340 aa10.38□□□□□ -0.75
GGPS1-205ENST00000482013 ZNF716A6NP11 495 aa10.38□□□□□ -0.75
GGPS1-205ENST00000482013 NOTOA8MTQ0 251 aa10.38□□□□□ -0.75
GGPS1-205ENST00000482013 PSMD9O00233 223 aa10.38□□□□□ -0.75
GGPS1-205ENST00000482013 RGS5O15539 181 aa10.38□□□□□ -0.75
GGPS1-205ENST00000482013 DHHO43323 396 aa10.38□□□□□ -0.75
GGPS1-205ENST00000482013 SLC43A1O75387 559 aa10.38□□□□□ -0.75
GGPS1-205ENST00000482013 SRSF10O75494 262 aaKnown RBP10.38□□□□□ -0.75
GGPS1-205ENST00000482013 CEACAM4O75871 244 aa10.38□□□□□ -0.75
GGPS1-205ENST00000482013 ZNF708P17019 499 aa10.38□□□□□ -0.75
GGPS1-205ENST00000482013 SDHBP21912 280 aa10.38□□□□□ -0.75
GGPS1-205ENST00000482013 APEX1P27695 318 aaKnown RBP10.38□□□□□ -0.75
GGPS1-205ENST00000482013 RPS27P42677 84 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms