RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 MOSPD2Q8NHP6 518 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 ZNF563Q8TA94 476 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 LGALS14Q8TCE9 139 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 LMX1AQ8TE12 382 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 SMAP2Q8WU79 429 aaPredicted RBP4.46□□□□□ -1.7
SF3B6-202ENST00000478050 SMIM4Q8WVI0 70 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 RAB40AQ8WXH6 277 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 HIST1H2ACQ93077 130 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 ARSGQ96EG1 525 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 ZDHHC12Q96GR4 267 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 LCORQ96JN0 433 aaPredicted RBP4.46□□□□□ -1.7
SF3B6-202ENST00000478050 Q96M85 177 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 ADAD1Q96M93 576 aaKnown RBP4.46□□□□□ -1.7
SF3B6-202ENST00000478050 DERL3Q96Q80 235 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 OR14A2Q96R54 314 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 OR1F2PQ96R84 312 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 GFM1Q96RP9 751 aaKnown RBP4.46□□□□□ -1.7
SF3B6-202ENST00000478050 ALG12Q9BV10 488 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 CACNG6Q9BXT2 260 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 BEX2Q9BXY8 128 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 TTTY10Q9BZA0 68 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 PCED1AQ9H1Q7 454 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 OR51J1Q9H342 316 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 GHITMQ9H3K2 345 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 RANBP3Q9H6Z4 567 aaPredicted RBP4.46□□□□□ -1.7
SF3B6-202ENST00000478050 FKRPQ9H9S5 495 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 MMP25Q9NPA2 562 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 NOX4Q9NPH5 578 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 NANSQ9NR45 359 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 PLSCR3Q9NRY6 295 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 LANCL2Q9NS86 450 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 COA3Q9Y2R0 106 aaPredicted RBP4.46□□□□□ -1.7
SF3B6-202ENST00000478050 AK6Q9Y3D8 172 aaKnown RBP4.46□□□□□ -1.7
SF3B6-202ENST00000478050 ETV7Q9Y603 341 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 TMEM14AQ9Y6G1 99 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 RNF215Q9Y6U7 377 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 V9GY05 133 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 RALGAPA1Q6GYQ0 2036 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 NBEAQ8NFP9 2946 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 TRAV6A0A075B6T7 132 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 TRAV36DV7A0A075B6V5 113 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 IGKV3D-11A0A0A0MRZ8 115 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 IGHV1OR15-9A0A0B4J2B8 117 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 TRBV5-5A0A0J9YX44 114 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 A0A1B0GVT2 93 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 A0A1W2PPK0 400 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 A0A1W2PR77 199 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 TRABD2BA6NFA1 517 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 SHISA7A6NL88 538 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 OR6C76A6NM76 312 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 IFITM5A6NNB3 132 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 C22orf46C9J442 243 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 BLOC1S5-TXNDC5H3BN57 136 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 TO15178 435 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 PIN1P1O15428 100 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 MAGEB4O15481 346 aaPredicted RBP4.45□□□□□ -1.7
SF3B6-202ENST00000478050 CDC40O60508 579 aaKnown RBP eCLIP4.45□□□□□ -1.7
SF3B6-202ENST00000478050 PRAF2O60831 178 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 ZNF780AO75290 641 aaPredicted RBP4.45□□□□□ -1.7
SF3B6-202ENST00000478050 UPK3AO75631 287 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 C1QL1O75973 258 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 KRT33AO76009 404 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 LDOC1O95751 146 aaPredicted RBP4.45□□□□□ -1.7
SF3B6-202ENST00000478050 ABHD16AO95870 558 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 PLATP00750 562 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 RAF1P04049 648 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 IGKV3-11P04433 115 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 DBHP09172 617 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 CD3GP09693 182 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 PGCP20142 388 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 GIFP27352 417 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 DPP4P27487 766 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 IL12BP29460 328 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 EVI2BP34910 448 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 CDKN2AP42771 156 aaKnown RBP4.45□□□□□ -1.7
SF3B6-202ENST00000478050 BLVRAP53004 296 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 GFERP55789 205 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 GNG2P59768 71 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 HNRNPKP61978 463 aaKnown RBP eCLIP4.45□□□□□ -1.7
SF3B6-202ENST00000478050 RPL18Q07020 188 aaKnown RBP4.45□□□□□ -1.7
SF3B6-202ENST00000478050 SNTB2Q13425 540 aaKnown RBP4.45□□□□□ -1.7
SF3B6-202ENST00000478050 FCN2Q15485 313 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 ELAVL1Q15717 326 aaKnown RBP4.45□□□□□ -1.7
SF3B6-202ENST00000478050 CD226Q15762 336 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 Q499Y3 187 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 GXYLT1Q4G148 440 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 C14orf28Q4W4Y0 310 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 Q5BKY6 102 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 ELFN2Q5R3F8 820 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 HES5Q5TA89 166 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 HLA-DQA1Q5Y7H0 255 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 OLFML2AQ68BL7 652 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 THOC7Q6I9Y2 204 aaKnown RBP4.45□□□□□ -1.7
SF3B6-202ENST00000478050 FAM199XQ6PEV8 388 aaPredicted RBP4.45□□□□□ -1.7
SF3B6-202ENST00000478050 C5orf46Q6UWT4 87 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 Q6ZS52 159 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 UTS2BQ765I0 119 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 LINGO2Q7L985 606 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 CDC20BQ86Y33 519 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 TIGD4Q8IY51 512 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms