RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 TMEM183AQ8IXX5 376 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 ZADH2Q8N4Q0 377 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 OR8J1Q8NGP2 316 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 GIMAP1Q8WWP7 306 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 ASB9Q96DX5 294 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 CEP170P1Q96L14 293 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 IFT74Q96LB3 600 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 OR8B4Q96RC9 309 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 CNN2Q99439 309 aaKnown RBP3.07□□□□□ -1.92
PTCD3-211ENST00000476215 NPY6RQ99463 290 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 SORT1Q99523 831 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 FAIM2Q9BWQ8 316 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 ANKRD19PQ9H560 264 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 FN3KRPQ9HA64 309 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 PATZ1Q9HBE1 687 aaKnown RBP3.07□□□□□ -1.92
PTCD3-211ENST00000476215 SLCO1B3Q9NPD5 702 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 EXD2Q9NVH0 621 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 RBAKQ9NYW8 714 aaPredicted RBP3.07□□□□□ -1.92
PTCD3-211ENST00000476215 ASTN1O14525 1302 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 CNTNAP1P78357 1384 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 DLEC1Q9Y238 1755 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 NUP98P52948 1817 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 DICER1Q9UPY3 1922 aaKnown RBP3.07□□□□□ -1.92
PTCD3-211ENST00000476215 ARID1AO14497 2285 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 IGLV4-69A0A075B6H9 119 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 H3BNH8 94 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 B4GALT2O60909 372 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 SS18L1O75177 396 aaPredicted RBP3.06□□□□□ -1.92
PTCD3-211ENST00000476215 UBTFL1P0CB47 393 aaPredicted RBP3.06□□□□□ -1.92
PTCD3-211ENST00000476215 RPS12P25398 132 aaKnown RBP3.06□□□□□ -1.92
PTCD3-211ENST00000476215 COL4A5P29400 1685 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 HSD17B2P37059 387 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 CXCL5P42830 114 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 FGF8P55075 233 aaPredicted RBP3.06□□□□□ -1.92
PTCD3-211ENST00000476215 SCN7AQ01118 1682 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 CACNA1SQ13698 1873 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 GUCA2BQ16661 112 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 ZBED5Q49AG3 693 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 OR52W1Q6IF63 320 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 ZFP2Q6ZN57 461 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 KDM3BQ7LBC6 1761 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 H2BFWTQ7Z2G1 175 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 DLG5Q8TDM6 1919 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 DNAJC19Q96DA6 116 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 PLEKHA8Q96JA3 519 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 HSFY1Q96LI6 401 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 ZBTB18Q99592 522 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 GPR61Q9BZJ8 451 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 NT5C3AQ9H0P0 336 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 DNTTIP1Q9H147 329 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 ZNFX1Q9P2E3 1918 aaKnown RBP3.06□□□□□ -1.92
PTCD3-211ENST00000476215 NPTNQ9Y639 398 aa3.06□□□□□ -1.92
PTCD3-211ENST00000476215 SCN4AP35499 1836 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 BCORQ6W2J9 1755 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 TNRC6CQ9HCJ0 1690 aaKnown RBP3.05□□□□□ -1.92
PTCD3-211ENST00000476215 RTL9Q8NET4 1388 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 CDHR2Q9BYE9 1310 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 OR52A4PA6NMU1 304 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 RSPH10B2B2RC85 870 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 FOXE1O00358 373 aaPredicted RBP3.05□□□□□ -1.92
PTCD3-211ENST00000476215 MGRN1O60291 552 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 ERLIN2O94905 339 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 FGF1P05230 155 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 RSPH10BP0C881 870 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 ATP1B2P14415 290 aaPredicted RBP3.05□□□□□ -1.92
PTCD3-211ENST00000476215 ETS2P15036 469 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 ATP5C1P36542 298 aaKnown RBP3.05□□□□□ -1.92
PTCD3-211ENST00000476215 LONP1P36776 959 aaKnown RBP3.05□□□□□ -1.92
PTCD3-211ENST00000476215 GPR6P46095 362 aaPredicted RBP3.05□□□□□ -1.92
PTCD3-211ENST00000476215 GYG1P46976 350 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 NPBWR2P48146 333 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 SUB1P53999 127 aaKnown RBP eCLIP3.05□□□□□ -1.92
PTCD3-211ENST00000476215 ACTA1P68133 377 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 PTGES3Q15185 160 aaKnown RBP3.05□□□□□ -1.92
PTCD3-211ENST00000476215 RSPO1Q2MKA7 263 aaPredicted RBP3.05□□□□□ -1.92
PTCD3-211ENST00000476215 COA6Q5JTJ3 125 aaKnown RBP3.05□□□□□ -1.92
PTCD3-211ENST00000476215 KDM7AQ6ZMT4 941 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 LRRC74BQ6ZQY2 392 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 ZNF557Q8N988 423 aaPredicted RBP3.05□□□□□ -1.92
PTCD3-211ENST00000476215 OR1L6Q8NGR2 347 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 OR2G2Q8NGZ5 317 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 SDR42E1Q8WUS8 393 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 DCPSQ96C86 337 aaKnown RBP3.05□□□□□ -1.92
PTCD3-211ENST00000476215 MED8Q96G25 268 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 TAAR1Q96RJ0 339 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 ROPN1BQ9BZX4 212 aaPredicted RBP3.05□□□□□ -1.92
PTCD3-211ENST00000476215 MFFQ9GZY8 342 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 CTPS2Q9NRF8 586 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 ZNF639Q9UID6 485 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 PACSIN2Q9UNF0 486 aaPredicted RBP3.05□□□□□ -1.92
PTCD3-211ENST00000476215 PSG11Q9UQ72 335 aa3.05□□□□□ -1.92
PTCD3-211ENST00000476215 IGKV2D-24A0A075B6R9 120 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 PRSS37A4D1T9 235 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 XKRYO14609 159 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 CXCL11O14625 94 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 UPK3AO75631 287 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 GAPDHP04406 335 aaKnown RBP3.04□□□□□ -1.92
PTCD3-211ENST00000476215 IGHV3-43DP0DP04 118 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 MAGP20916 626 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 YAP1P46937 504 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms