RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 MRM3Q9HC36 420 aaKnown RBP3.34□□□□□ -1.87
VPS13D-207ENST00000476169 MIEF1Q9NQG6 463 aa3.34□□□□□ -1.87
VPS13D-207ENST00000476169 IMPAD1Q9NX62 359 aa3.34□□□□□ -1.87
VPS13D-207ENST00000476169 NKIRAS1Q9NYS0 192 aa3.34□□□□□ -1.87
VPS13D-207ENST00000476169 CACNG5Q9UF02 275 aa3.34□□□□□ -1.87
VPS13D-207ENST00000476169 GNPTGQ9UJJ9 305 aa3.34□□□□□ -1.87
VPS13D-207ENST00000476169 V9GY05 133 aa3.34□□□□□ -1.87
VPS13D-207ENST00000476169 MROH7Q68CQ1 1323 aa3.34□□□□□ -1.87
VPS13D-207ENST00000476169 NUP155O75694 1391 aa3.34□□□□□ -1.88
VPS13D-207ENST00000476169 ANKRD30BQ9BXX2 1392 aa3.34□□□□□ -1.88
VPS13D-207ENST00000476169 ERBINQ96RT1 1412 aa3.34□□□□□ -1.88
VPS13D-207ENST00000476169 ADGRL2O95490 1459 aa3.34□□□□□ -1.88
VPS13D-207ENST00000476169 PZPP20742 1482 aa3.34□□□□□ -1.88
VPS13D-207ENST00000476169 ERVK-7P63135 1459 aa3.34□□□□□ -1.88
VPS13D-207ENST00000476169 SHANK2Q9UPX8 1470 aa3.34□□□□□ -1.88
VPS13D-207ENST00000476169 ARHGEF5Q12774 1597 aa3.34□□□□□ -1.88
VPS13D-207ENST00000476169 RICTORQ6R327 1708 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 A0A087X002 238 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 ZNF816-ZNF321PA0A0X1KG74 233 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 KRTAP29-1A8MX34 341 aaPredicted RBP3.33□□□□□ -1.88
VPS13D-207ENST00000476169 RSPH10B2B2RC85 870 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 E7ENQ6 273 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 GOLGA8RI6L899 631 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 TOR1AO14656 332 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 PRMT5O14744 637 aaPredicted RBP3.33□□□□□ -1.88
VPS13D-207ENST00000476169 IDH3BO43837 385 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 SCN2BO60939 215 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 FKBP6O75344 327 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 VAPBO95292 243 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 TDP2O95551 362 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 CST4P01036 141 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 RHOCP08134 193 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 OR8U8P0C7N1 319 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 RSPH10BP0C881 870 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 LAMP1P11279 417 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 ZNF26P17031 533 aaPredicted RBP3.33□□□□□ -1.88
VPS13D-207ENST00000476169 IGHV1-2P23083 117 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 IVDP26440 423 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 NTSP30990 170 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 PCK1P35558 622 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 RANBP1P43487 201 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 CLDN6P56747 220 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 ERVPABLB-1P60509 514 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 MYL6P60660 151 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 ACVR1Q04771 509 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 TNXAQ16473 311 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 ATP6V1FQ16864 119 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 PGGHGQ32M88 737 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 ZNF506Q5JVG8 444 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 UTF1Q5T230 341 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 CNIH2Q6PI25 160 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 C12orf54Q6X4T0 127 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 DNM1P46Q6ZS02 220 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 USP43Q70EL4 1123 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 TMUB2Q71RG4 321 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 PIANPQ8IYJ0 282 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 VKORC1L1Q8N0U8 176 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 DNAAF3Q8N9W5 541 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 NOXO1Q8NFA2 376 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 OR6N2Q8NGY6 317 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 CCDC26Q8TAB7 109 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 VN1R17PQ8TDU5 208 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 DYNLL2Q96FJ2 89 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 FAM210AQ96ND0 272 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 DUX3Q96PT4 197 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 MCCC1Q96RQ3 725 aaPredicted RBP3.33□□□□□ -1.88
VPS13D-207ENST00000476169 CCDC28BQ9BUN5 200 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 ULBP2Q9BZM5 246 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 C1orf198Q9H425 327 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 TMEM38AQ9H6F2 299 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 UBE2ZQ9H832 354 aaPredicted RBP3.33□□□□□ -1.88
VPS13D-207ENST00000476169 LY9Q9HBG7 655 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 KCNJ16Q9NPI9 418 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 OR2S2Q9NQN1 319 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 EURLQ9NYK6 297 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 ARMCX1Q9P291 453 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 ZNF282Q9UDV7 671 aaPredicted RBP3.33□□□□□ -1.88
VPS13D-207ENST00000476169 MRM2Q9UI43 246 aaKnown RBP3.33□□□□□ -1.88
VPS13D-207ENST00000476169 CBY1Q9Y3M2 126 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 ROCK1Q13464 1354 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 NOS1P29475 1434 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 NAIPQ13075 1403 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 PLA2R1Q13018 1463 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 MROH1Q8NDA8 1641 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 BCORL1Q5H9F3 1711 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 KIDINS220Q9ULH0 1771 aa3.33□□□□□ -1.88
VPS13D-207ENST00000476169 IGLV7-46A0A075B6I9 117 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 IGKV1D-8A0A087WSZ0 117 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 IGHV1OR21-1A0A087WYE8 117 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 A6NIZ1 184 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 FAM166BA8MTA8 275 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 SAP18O00422 153 aaKnown RBP3.32□□□□□ -1.88
VPS13D-207ENST00000476169 ENSAO43768 121 aaKnown RBP3.32□□□□□ -1.88
VPS13D-207ENST00000476169 IL32P24001 234 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 IL2RGP31785 369 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 AQP2P41181 271 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 RBM34P42696 430 aaKnown RBP3.32□□□□□ -1.88
VPS13D-207ENST00000476169 RORCP51449 518 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 CCR8P51685 355 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 UGT2B15P54855 530 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms