RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 HIST2H3PS2Q5TEC6 136 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 ACSM5Q6NUN0 579 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 DNM1P34Q6PK57 102 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 C20orf204Q6ZNR8 217 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 HIST2H3AQ71DI3 136 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 SLC16A14Q7RTX9 510 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 JAZF1Q86VZ6 243 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 SLC37A3Q8NCC5 494 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 KBTBD8Q8NFY9 601 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 SLC26A10Q8NG04 563 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 OR52E2Q8NGJ4 325 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 TEX47Q8TBZ9 253 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 MBD6Q96DN6 1003 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 TSSK2Q96PF2 358 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 C1QTNF6Q9BXI9 259 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 USE1Q9NZ43 259 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 ST6GALNAC2Q9UJ37 374 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 COA3Q9Y2R0 106 aaPredicted RBP14.7□□□□□ -0.06
SCAF11-206ENST00000474828 CADP27708 2225 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 ICMTO60725 284 aa14.69□□□□□ -0.06
SCAF11-206ENST00000474828 CELA3BP08861 270 aa14.69□□□□□ -0.06
SCAF11-206ENST00000474828 ZNF23P17027 643 aa14.69□□□□□ -0.06
SCAF11-206ENST00000474828 CRISP1P54107 249 aa14.69□□□□□ -0.06
SCAF11-206ENST00000474828 SPOCK1Q08629 439 aa14.69□□□□□ -0.06
SCAF11-206ENST00000474828 GINS1Q14691 196 aa14.69□□□□□ -0.06
SCAF11-206ENST00000474828 SLC35F1Q5T1Q4 408 aa14.69□□□□□ -0.06
SCAF11-206ENST00000474828 SDR9C7Q8NEX9 313 aa14.69□□□□□ -0.06
SCAF11-206ENST00000474828 NUP37Q8NFH4 326 aa14.69□□□□□ -0.06
SCAF11-206ENST00000474828 HTRA1Q92743 480 aa14.69□□□□□ -0.06
SCAF11-206ENST00000474828 ZNF416Q9BWM5 594 aa14.69□□□□□ -0.06
SCAF11-206ENST00000474828 LIME1Q9H400 295 aa14.69□□□□□ -0.06
SCAF11-206ENST00000474828 C1orf198Q9H425 327 aa14.69□□□□□ -0.06
SCAF11-206ENST00000474828 SEC61A2Q9H9S3 476 aa14.69□□□□□ -0.06
SCAF11-206ENST00000474828 IGHV2OR16-5A0A0B4J2B6 119 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 E7EQL1 145 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 H3BN98 237 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 SURF4O15260 269 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 ATE1O95260 518 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 SNAP29O95721 258 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 HMGN1P05114 100 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 ALPLP05186 524 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 PATE4P0C8F1 98 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 CD79AP11912 226 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 CD53P19397 219 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 CALCRP30988 508 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 GUCA1AP43080 201 aaPredicted RBP14.68□□□□□ -0.06
SCAF11-206ENST00000474828 IDH3GP51553 393 aaPredicted RBP14.68□□□□□ -0.06
SCAF11-206ENST00000474828 PCBD1P61457 104 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 NKX6-1P78426 367 aaPredicted RBP14.68□□□□□ -0.06
SCAF11-206ENST00000474828 HSF2Q03933 536 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 CRMP1Q14194 572 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 PCK2Q16822 640 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 FBXW10Q5XX13 1052 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 ALKBH2Q6NS38 261 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 TMEM53Q6P2H8 277 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 B3GLCTQ6Y288 498 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 DTX2Q86UW9 622 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 PQLC1Q8N2U9 271 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 OR2T4Q8NH00 348 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 AKAP1Q92667 903 aaKnown RBP eCLIP14.68□□□□□ -0.06
SCAF11-206ENST00000474828 PTP4A1Q93096 173 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 RBM4BQ9BQ04 359 aaKnown RBP14.68□□□□□ -0.06
SCAF11-206ENST00000474828 GABARAPL3Q9BY60 117 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 SEMA6AQ9H2E6 1030 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 RPRD1BQ9NQG5 326 aaKnown RBP14.68□□□□□ -0.06
SCAF11-206ENST00000474828 ENOPH1Q9UHY7 261 aa14.68□□□□□ -0.06
SCAF11-206ENST00000474828 ANKRD17O75179 2603 aaKnown RBP14.68□□□□□ -0.06
SCAF11-206ENST00000474828 ZAR1LA6NP61 321 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 C12orf71A8MTZ7 269 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 RAB36O95755 333 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 IFNGP01579 166 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 CRYAAP02489 173 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 TFP02787 698 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 COX5BP10606 129 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 PAX1P15863 534 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 ZNF32P17041 273 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 PSG4Q00888 419 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 HGFACQ04756 655 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 GLO1Q04760 184 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 PIGFQ07326 219 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 PTGES3Q15185 160 aaKnown RBP14.67□□□□□ -0.06
SCAF11-206ENST00000474828 SGCAQ16586 387 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 LINC01590Q5TEZ4 76 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 ZNF544Q6NX49 715 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 UGT2A3Q6UWM9 527 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 CDH24Q86UP0 819 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 IQCF1Q8N6M8 205 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 CPEB3Q8NE35 698 aaKnown RBP14.67□□□□□ -0.06
SCAF11-206ENST00000474828 OR4F15Q8NGB8 312 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 ZNRF4Q8WWF5 429 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 C11orf40Q8WZ69 217 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 NRGNQ92686 78 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 NEUROG1Q92886 237 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 CIB1Q99828 191 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 OR2H1Q9GZK4 316 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 SRA1Q9HD15 236 aaKnown RBP14.67□□□□□ -0.06
SCAF11-206ENST00000474828 KRT84Q9NSB2 600 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 ATPIF1Q9UII2 106 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 EDARQ9UNE0 448 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 MOKQ9UQ07 419 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms