RNA–Protein interactions for RNA: ENST00000473405.1

CCDC88B-206, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best)

Gene CCDC88B, Length 783 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-206ENST00000473405 TFP02787 698 aa16.02■□□□□ 0.16
CCDC88B-206ENST00000473405 IFNW1P05000 195 aa16.02■□□□□ 0.16
CCDC88B-206ENST00000473405 GAAP10253 952 aa16.02■□□□□ 0.16
CCDC88B-206ENST00000473405 NR2C1P13056 603 aa16.02■□□□□ 0.16
CCDC88B-206ENST00000473405 PSG4Q00888 419 aa16.02■□□□□ 0.16
CCDC88B-206ENST00000473405 LIPEQ05469 1076 aa16.02■□□□□ 0.16
CCDC88B-206ENST00000473405 SGCAQ16586 387 aa16.02■□□□□ 0.16
CCDC88B-206ENST00000473405 SPATA46Q5T0L3 261 aa16.02■□□□□ 0.16
CCDC88B-206ENST00000473405 THEM4Q5T1C6 240 aa16.02■□□□□ 0.16
CCDC88B-206ENST00000473405 C8orf82Q6P1X6 216 aaPredicted RBP16.02■□□□□ 0.16
CCDC88B-206ENST00000473405 FOXL2NBQ6ZUU3 175 aa16.02■□□□□ 0.16
CCDC88B-206ENST00000473405 ARPINQ7Z6K5 226 aa16.02■□□□□ 0.16
CCDC88B-206ENST00000473405 GLCCI1Q86VQ1 547 aa16.02■□□□□ 0.16
CCDC88B-206ENST00000473405 WNT5BQ9H1J7 359 aa16.02■□□□□ 0.16
CCDC88B-206ENST00000473405 KCNN2Q9H2S1 579 aa16.02■□□□□ 0.16
CCDC88B-206ENST00000473405 TREM2Q9NZC2 230 aa16.02■□□□□ 0.16
CCDC88B-206ENST00000473405 C5orf49A4QMS7 147 aa16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 GMNCA6NCL1 334 aa16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 CDC14BO60729 498 aa16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 MSMBP08118 114 aa16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 CCNOP22674 350 aa16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 LAP3P28838 519 aa16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 MPV17P39210 176 aa16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 CTXN1P60606 82 aa16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 PRKCDQ05655 676 aa16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 TRAM2Q15035 370 aa16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 FAM205BPQ63HN1 556 aa16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 RFPL4BQ6ZWI9 263 aa16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 OR13C2Q8NGS9 318 aa16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 OR51A7Q8NH64 312 aa16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 RP9Q8TA86 221 aaKnown RBP16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 IPCEF1Q8WWN9 437 aaPredicted RBP16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 GEMIN6Q8WXD5 167 aaKnown RBP16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 ACOT11Q8WXI4 607 aaPredicted RBP16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 MARS2Q96GW9 593 aaKnown RBP16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 FNDC11Q9BVV2 318 aa16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 OR2H1Q9GZK4 316 aa16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 LPAR2Q9HBW0 351 aa16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 HIF1ANQ9NWT6 349 aa16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 AP3M1Q9Y2T2 418 aa16.01■□□□□ 0.15
CCDC88B-206ENST00000473405 WNK2Q9Y3S1 2297 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 A0A087WUU8 490 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 IGHV1-69-2A0A0G2JMI3 117 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 CXCR6O00574 342 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 CDC42EP2O14613 210 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 ICMTO60725 284 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 ZNF682O95780 498 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 CST2P09228 141 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 COX4I1P13073 169 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 ZNF26P17031 533 aaPredicted RBP16■□□□□ 0.15
CCDC88B-206ENST00000473405 PCMT1P22061 227 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 IFNA8P32881 189 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 SRP14P37108 136 aaKnown RBP16■□□□□ 0.15
CCDC88B-206ENST00000473405 CRYBB2P43320 205 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 MMP15P51511 669 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 SLC7A2P52569 658 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 CBLL1Q75N03 491 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 TSEN54Q7Z6J9 526 aaKnown RBP16■□□□□ 0.15
CCDC88B-206ENST00000473405 OAFQ86UD1 273 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 RFLNBQ8N5W9 214 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 FAM156AQ8NDB6 213 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 TMEM186Q96B77 213 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 HSH2DQ96JZ2 352 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 CACNG2Q9Y698 323 aa16■□□□□ 0.15
CCDC88B-206ENST00000473405 EFCAB9A8MZ26 197 aa15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 H7C1C5 153 aa15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 DRD4P21917 467 aa15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 GPR4P46093 362 aa15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 GSK3BP49841 420 aa15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 GDI2P50395 445 aaKnown RBP15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 LCN6P62502 163 aa15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 ENDOGQ14249 297 aaKnown RBP15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 ANKDD1AQ495B1 522 aa15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 IFI44LQ53G44 452 aa15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 AVPI1Q5T686 147 aa15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 TBPL2Q6SJ96 375 aa15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 MBOAT2Q6ZWT7 520 aa15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 USP51Q70EK9 711 aa15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 TREML1Q86YW5 311 aa15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 SLC25A40Q8TBP6 338 aa15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 FNDC8Q8TC99 324 aa15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 RBP7Q96R05 134 aa15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 OR2J1Q9GZK6 312 aa15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 SAP30LQ9HAJ7 183 aa15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 ADAM18Q9Y3Q7 739 aa15.99■□□□□ 0.15
CCDC88B-206ENST00000473405 A0A1W2PPL8 197 aa15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 A6NIZ1 184 aa15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 ZSCAN5BA6NJL1 495 aa15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 TCF21O43680 179 aa15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 SERPINA1P01009 418 aa15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 NGFP01138 241 aa15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 IGHV1-46P01743 117 aa15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 MT-ND5P03915 603 aa15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 SCG5P05408 212 aa15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 SLC9A3P48764 834 aa15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 ZNF81P51508 661 aa15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 RAP1BP61224 184 aa15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 RAP1AP62834 184 aa15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 MVKQ03426 396 aa15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 TSTQ16762 297 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms