RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 MAS1LP35410 378 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 ATP5C1P36542 298 aaKnown RBP0.58□□□□□ -2.32
COMMD3-209ENST00000471350 MPV17P39210 176 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 SSR1P43307 286 aaKnown RBP0.58□□□□□ -2.32
COMMD3-209ENST00000471350 TAS2R31P59538 309 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 NUTF2P61970 127 aaKnown RBP0.58□□□□□ -2.32
COMMD3-209ENST00000471350 CRADDP78560 199 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 CDK16Q00536 496 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 MAD2L1BPQ15013 274 aaPredicted RBP0.58□□□□□ -2.32
COMMD3-209ENST00000471350 MPV17L2Q567V2 206 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 PYDC2Q56P42 97 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 SLC10A5Q5PT55 438 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 KRTAP5-10Q6L8G5 202 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 PLET1Q6UQ28 207 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 C16orf47Q6ZP98 133 aaPredicted RBP0.58□□□□□ -2.32
COMMD3-209ENST00000471350 ZSCAN30Q86W11 494 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 TICAM2Q86XR7 235 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 SGPP2Q8IWX5 399 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 METTL13Q8N6R0 699 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 FADS6Q8N9I5 356 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 TTLQ8NG68 377 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 TMEM54Q969K7 222 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 PTX4Q96A99 478 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 MRPL38Q96DV4 380 aaKnown RBP0.58□□□□□ -2.32
COMMD3-209ENST00000471350 PIK3IP1Q96FE7 263 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 CNDP1Q96KN2 507 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 C4orf36Q96KX1 117 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 MS4A4EQ96PG1 132 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 HSD17B10Q99714 261 aaKnown RBP0.58□□□□□ -2.32
COMMD3-209ENST00000471350 DHX35Q9H5Z1 703 aaKnown RBP0.58□□□□□ -2.32
COMMD3-209ENST00000471350 C21orf62Q9NYP8 219 aa0.58□□□□□ -2.32
COMMD3-209ENST00000471350 PIN4Q9Y237 131 aaKnown RBP0.58□□□□□ -2.32
COMMD3-209ENST00000471350 TET2Q6N021 2002 aaPredicted RBP0.58□□□□□ -2.32
COMMD3-209ENST00000471350 PNPLA6Q8IY17 1366 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 ARHGEF35A5YM69 484 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 C4orf51C9J302 202 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 GOLGA8SH3BPF8 625 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 MFNGO00587 321 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 PRKAB2O43741 272 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 RAMP3O60896 148 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 IGHV2-5P01817 119 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 PFN1P07737 140 aaKnown RBP0.57□□□□□ -2.32
COMMD3-209ENST00000471350 OR8U9P0C7N5 309 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 CHI3L1P36222 383 aaPredicted RBP0.57□□□□□ -2.32
COMMD3-209ENST00000471350 OPRD1P41143 372 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 SYKP43405 635 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 YAP1P46937 504 aaKnown RBP0.57□□□□□ -2.32
COMMD3-209ENST00000471350 GALR1P47211 349 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 RABIFP47224 123 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 ZNF138P52744 262 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 ATP1B3P54709 279 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 VSX2P58304 361 aaPredicted RBP0.57□□□□□ -2.32
COMMD3-209ENST00000471350 CDH17Q12864 832 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 SELPLGQ14242 412 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 INAQ16352 499 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 DGUOKQ16854 277 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 PTPN20Q4JDL3 420 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 SFT2D3Q587I9 215 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 YIF1BQ5BJH7 314 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 MORN3Q6PF18 240 aaPredicted RBP0.57□□□□□ -2.32
COMMD3-209ENST00000471350 TMEM205Q6UW68 189 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 HSD17B11Q8NBQ5 300 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 OR10T2Q8NGX3 314 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 MGARPQ8TDB4 240 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 HGDQ93099 445 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 CCDC47Q96A33 483 aaKnown RBP0.57□□□□□ -2.32
COMMD3-209ENST00000471350 SEH1LQ96EE3 360 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 WDR34Q96EX3 536 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 RBM14Q96PK6 669 aaKnown RBP0.57□□□□□ -2.32
COMMD3-209ENST00000471350 ZNF607Q96SK3 696 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 SH3GL1Q99961 368 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 SEC22CQ9BRL7 303 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 TCHPQ9BT92 498 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 RWDD1Q9H446 243 aaPredicted RBP0.57□□□□□ -2.32
COMMD3-209ENST00000471350 FN3KRPQ9HA64 309 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 SLC38A10Q9HBR0 1119 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 FARSBQ9NSD9 589 aaKnown RBP0.57□□□□□ -2.32
COMMD3-209ENST00000471350 NINJ2Q9NZG7 142 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 POLDIP2Q9Y2S7 368 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 HELZ2Q9BYK8 2649 aaKnown RBP0.57□□□□□ -2.32
COMMD3-209ENST00000471350 KIF16BQ96L93 1317 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 CDHR2Q9BYE9 1310 aa0.57□□□□□ -2.32
COMMD3-209ENST00000471350 IGHV7-4-1A0A0J9YVY3 117 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 CEACAM18A8MTB9 384 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 CCL21O00585 134 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 MRPS12O15235 138 aaKnown RBP0.56□□□□□ -2.32
COMMD3-209ENST00000471350 SOX15O60248 233 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 EIF1BO60739 113 aaKnown RBP0.56□□□□□ -2.32
COMMD3-209ENST00000471350 SEC22BO75396 215 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 REM1O75628 298 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 SLC22A5O76082 557 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 AIFM1O95831 613 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 HRES1P13985 223 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 STMN1P16949 149 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 LAP3P28838 519 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 ATP6V1E1P36543 226 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 EIF1P41567 113 aaKnown RBP0.56□□□□□ -2.32
COMMD3-209ENST00000471350 CDKN1BP46527 198 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 RFX3P48380 749 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 PRLHRP49683 370 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms