RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 SF3B5Q9BWJ5 86 aaKnown RBP16.11■□□□□ 0.17
SMC4-211ENST00000469858 MROQ9BYG7 248 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 SEC61A2Q9H9S3 476 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 ELOVL3Q9HB03 270 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 HMG20AQ9NP66 347 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 DNAJC13O75165 2243 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 KLK10O43240 276 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 SC5DO75845 299 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 HRGP04196 525 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 ITGB2P05107 769 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 S100A5P33763 92 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 CSNK1A1P48729 337 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 CAV3P56539 151 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 MRPL28Q13084 256 aaKnown RBP16.11■□□□□ 0.17
SMC4-211ENST00000469858 HYAL4Q2M3T9 481 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 PDSS1Q5T2R2 415 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 KCTD18Q6PI47 426 aaPredicted RBP16.11■□□□□ 0.17
SMC4-211ENST00000469858 SLC25A47Q6Q0C1 308 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 DCXRQ7Z4W1 244 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 KRT77Q7Z794 578 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 EGFL6Q8IUX8 553 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 ZNF679Q8IYX0 411 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 OR6N1Q8NGY5 312 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 OR52N5Q8NH56 324 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 CPNE4Q96A23 557 aaPredicted RBP16.11■□□□□ 0.17
SMC4-211ENST00000469858 ZNF775Q96BV0 537 aaPredicted RBP16.11■□□□□ 0.17
SMC4-211ENST00000469858 PPIL3Q9H2H8 161 aaKnown RBP16.11■□□□□ 0.17
SMC4-211ENST00000469858 TIGARQ9NQ88 270 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 GLTPQ9NZD2 209 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 LOC400499M0QZD8 3231 aa16.1■□□□□ 0.17
SMC4-211ENST00000469858 ZFHX4Q86UP3 3567 aa16.1■□□□□ 0.17
SMC4-211ENST00000469858 A0A1B0GTH9 108 aa16.1■□□□□ 0.17
SMC4-211ENST00000469858 ZFPL1O95159 310 aa16.1■□□□□ 0.17
SMC4-211ENST00000469858 SERPINA3P01011 423 aa16.1■□□□□ 0.17
SMC4-211ENST00000469858 CD1AP06126 327 aa16.1■□□□□ 0.17
SMC4-211ENST00000469858 CDAP32320 146 aa16.1■□□□□ 0.17
SMC4-211ENST00000469858 SELENOPP49908 381 aa16.1■□□□□ 0.17
SMC4-211ENST00000469858 ALKBH1Q13686 389 aaKnown RBP16.1■□□□□ 0.17
SMC4-211ENST00000469858 ZNF846Q147U1 533 aa16.1■□□□□ 0.17
SMC4-211ENST00000469858 LRFN4Q6PJG9 635 aa16.1■□□□□ 0.17
SMC4-211ENST00000469858 CORO6Q6QEF8 472 aa16.1■□□□□ 0.17
SMC4-211ENST00000469858 ZIC4Q8N9L1 334 aa16.1■□□□□ 0.17
SMC4-211ENST00000469858 HAVCR2Q8TDQ0 301 aa16.1■□□□□ 0.17
SMC4-211ENST00000469858 BORCS5Q969J3 196 aa16.1■□□□□ 0.17
SMC4-211ENST00000469858 SMURF1Q9HCE7 757 aa16.1■□□□□ 0.17
SMC4-211ENST00000469858 FRRS1LQ9P0K9 344 aa16.1■□□□□ 0.17
SMC4-211ENST00000469858 KCNMB2Q9Y691 235 aa16.1■□□□□ 0.17
SMC4-211ENST00000469858 A0A087WV48 116 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 ACOT7O00154 380 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 EFSO43281 561 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 GPRIN2O60269 458 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 TMCC2O75069 709 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 AQP8O94778 261 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 NR2C1P13056 603 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 CLDN18P56856 261 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 RPS11P62280 158 aaKnown RBP eCLIP16.09■□□□□ 0.178e-17■■■■■ 578.9
SMC4-211ENST00000469858 ROM1Q03395 351 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 INAQ16352 499 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 PCK2Q16822 640 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 TEX30Q5JUR7 227 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 ABLIM2Q6H8Q1 611 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 OR7E24Q6IFN5 339 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 TMEM123Q8N131 208 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 MFSD4AQ8N468 514 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 FAM109AQ8N4B1 249 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 HTRA1Q92743 480 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 WDR12Q9GZL7 423 aaKnown RBP16.09■□□□□ 0.17
SMC4-211ENST00000469858 EMC7Q9NPA0 242 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 QPCTLQ9NXS2 382 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 CRNNQ9UBG3 495 aaPredicted RBP16.09■□□□□ 0.17
SMC4-211ENST00000469858 FLVCR1Q9Y5Y0 555 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 PEX16Q9Y5Y5 336 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 A0A075B6Q4 140 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 ZNF716A6NP11 495 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 HSPB2A8KAH6 182 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 CTDSP2O14595 271 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 NCR1O76036 304 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 SLC10A1Q14973 349 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 HSPB2Q16082 182 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 ZMAT1Q5H9K5 638 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 PHYHD1Q5SRE7 291 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 FCRLAQ7L513 359 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 OR2G2Q8NGZ5 317 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 ST7LQ8TDW4 575 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 OR14A2Q96R54 314 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 SMAD5Q99717 465 aaKnown RBP16.09■□□□□ 0.17
SMC4-211ENST00000469858 PLEKHB1Q9UF11 243 aaPredicted RBP16.09■□□□□ 0.17
SMC4-211ENST00000469858 POLR1DQ9Y2S0 133 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 ZNF281Q9Y2X9 895 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 LRP12Q9Y561 859 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 LIPGQ9Y5X9 500 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 AKAP13Q12802 2813 aa16.09■□□□□ 0.17
SMC4-211ENST00000469858 A0A1W2PPK0 400 aa16.08■□□□□ 0.16
SMC4-211ENST00000469858 RGS5O15539 181 aa16.08■□□□□ 0.16
SMC4-211ENST00000469858 ZNF432O94892 652 aa16.08■□□□□ 0.16
SMC4-211ENST00000469858 ZNF708P17019 499 aa16.08■□□□□ 0.16
SMC4-211ENST00000469858 MYL9P24844 172 aa16.08■□□□□ 0.16
SMC4-211ENST00000469858 MTNR1BP49286 362 aa16.08■□□□□ 0.16
SMC4-211ENST00000469858 RIDAP52758 137 aaKnown RBP16.08■□□□□ 0.16
SMC4-211ENST00000469858 PMP22Q01453 160 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms