RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 HS3ST6Q96QI5 342 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 CCL19Q99731 98 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 NIPSNAP1Q9BPW8 284 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 DHRS9Q9BPW9 319 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 TSSK6Q9BXA6 273 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 GABARAPL1Q9H0R8 117 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 EGLN3Q9H6Z9 239 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 RNF121Q9H920 327 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 UBTD1Q9HAC8 227 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 POLE4Q9NR33 117 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 PAPOLBQ9NRJ5 636 aaKnown RBP7.45□□□□□ -1.22
SSBP1-208ENST00000469123 ATPIF1Q9UII2 106 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 TIMM10BQ9Y5J6 103 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 USF3Q68DE3 2245 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 IGHV1-18A0A0C4DH31 117 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 A0A1W2PPL8 197 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 G3V2T6 193 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 ATE1O95260 518 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 SNAP29O95721 258 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 COX5BP10606 129 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 PAX1P15863 534 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 CTLA4P16410 223 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 ZNF14P17017 642 aaPredicted RBP7.44□□□□□ -1.22
SSBP1-208ENST00000469123 TUBG1P23258 451 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 CDKN2AP42771 156 aaKnown RBP7.44□□□□□ -1.22
SSBP1-208ENST00000469123 GIPRP48546 466 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 IDH3GP51553 393 aaPredicted RBP7.44□□□□□ -1.22
SSBP1-208ENST00000469123 SLC25A1P53007 311 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 IST1P53990 364 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 KRTAP10-9P60411 292 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 GALK2Q01415 458 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 FMODQ06828 376 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.44□□□□□ -1.222e-6■□□□□ 8.3
SSBP1-208ENST00000469123 PPP1R8Q12972 351 aaKnown RBP7.44□□□□□ -1.22
SSBP1-208ENST00000469123 KCNMB1Q16558 191 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 SGCAQ16586 387 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 TBC1D28Q2M2D7 210 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 PGGHGQ32M88 737 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 CLEC12AQ5QGZ9 265 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 AGAP6Q5VW22 663 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 FAHD1Q6P587 224 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 ARL9Q6T311 187 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 PTCHD4Q6ZW05 846 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 DTX2Q86UW9 622 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 SKA3Q8IX90 412 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 FBXL14Q8N1E6 418 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 LRRC75A-AS1Q8N1F1 130 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 NPEPL1Q8NDH3 523 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 KBTBD8Q8NFY9 601 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 OR4K13Q8NH42 304 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 TMEM171Q8WVE6 324 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 STMN2Q93045 179 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 ZNF75AQ96N20 296 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 FOXC2Q99958 501 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 RBM4BQ9BQ04 359 aaKnown RBP7.44□□□□□ -1.22
SSBP1-208ENST00000469123 RBM4Q9BWF3 364 aaKnown RBP7.44□□□□□ -1.22
SSBP1-208ENST00000469123 ZNF442Q9H7R0 627 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 SEC61A2Q9H9S3 476 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 NTN4Q9HB63 628 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 SLC25A19Q9HC21 320 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 TUBG2Q9NRH3 451 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 CMC2Q9NRP2 79 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 KRT84Q9NSB2 600 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 CISD1Q9NZ45 108 aaKnown RBP7.44□□□□□ -1.22
SSBP1-208ENST00000469123 ZNF224Q9NZL3 707 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 IL20RAQ9UHF4 553 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 NDRG4Q9ULP0 352 aaKnown RBP7.44□□□□□ -1.22
SSBP1-208ENST00000469123 UGT2A1Q9Y4X1 527 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 ORC6Q9Y5N6 252 aa7.44□□□□□ -1.22
SSBP1-208ENST00000469123 PRRC2AP48634 2157 aaKnown RBP7.43□□□□□ -1.22
SSBP1-208ENST00000469123 ARFGEF3Q5TH69 2177 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 IGKV1D-43A0A0B4J1Z2 117 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 IGHV2OR16-5A0A0B4J2B6 119 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 A0A1W2PPR1 153 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 H7C1C5 153 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 J3QW42 95 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 SEC14L2O76054 403 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 MMP7P09237 267 aaPredicted RBP7.43□□□□□ -1.22
SSBP1-208ENST00000469123 CD53P19397 219 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 PCSK6P29122 969 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 APOBEC3AP31941 199 aaPredicted RBP7.43□□□□□ -1.22
SSBP1-208ENST00000469123 APLNRP35414 380 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 ERFP50548 548 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 LCN6P62502 163 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 ETFDHQ16134 617 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 DEFB113Q30KQ7 82 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 KDM4DQ6B0I6 523 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 TMEM179BQ7Z7N9 219 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 MUC15Q8N387 334 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 LRRC18Q8N456 261 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 SLC30A7Q8NEW0 376 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 SDR9C7Q8NEX9 313 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 OR10H5Q8NGA6 315 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 OR52E2Q8NGJ4 325 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 OR8D4Q8NGM9 314 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 SMAP2Q8WU79 429 aaPredicted RBP7.43□□□□□ -1.22
SSBP1-208ENST00000469123 PYDC1Q8WXC3 89 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 TRMT61AQ96FX7 289 aaKnown RBP7.43□□□□□ -1.22
SSBP1-208ENST00000469123 PLEKHA8Q96JA3 519 aa7.43□□□□□ -1.22
SSBP1-208ENST00000469123 COG8Q96MW5 612 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms