RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ECH1Q13011 328 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 GK3PQ14409 553 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 ADAMTS13Q76LX8 1427 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 BHLHA15Q7RTS1 189 aaPredicted RBP2.04□□□□□ -2.08
SMC4-207ENST00000467263 EFL1Q7Z2Z2 1120 aaKnown RBP2.04□□□□□ -2.08
SMC4-207ENST00000467263 OR10R2Q8NGX6 335 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 OR8U1Q8NH10 309 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 C15orf40Q8WUR7 153 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 DOK1Q99704 481 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 TIMM29Q9BSF4 260 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 PARP12Q9H0J9 701 aaKnown RBP2.04□□□□□ -2.08
SMC4-207ENST00000467263 SGK2Q9HBY8 427 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 SLC7A8Q9UHI5 535 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 ZNF639Q9UID6 485 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 ATP6V0A2Q9Y487 856 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 FOXE1O00358 373 aaPredicted RBP2.03□□□□□ -2.08
SMC4-207ENST00000467263 DYNC1I1O14576 645 aa2.03□□□□□ -2.08
SMC4-207ENST00000467263 GCM2O75603 506 aaPredicted RBP2.03□□□□□ -2.08
SMC4-207ENST00000467263 CDRT1O95170 752 aa2.03□□□□□ -2.08
SMC4-207ENST00000467263 CCNE2O96020 404 aa2.03□□□□□ -2.08
SMC4-207ENST00000467263 APCSP02743 223 aa2.03□□□□□ -2.08
SMC4-207ENST00000467263 C1GALT1C1LP0DN25 315 aa2.03□□□□□ -2.08
SMC4-207ENST00000467263 OPRK1P41145 380 aa2.03□□□□□ -2.08
SMC4-207ENST00000467263 AQP2P41181 271 aa2.03□□□□□ -2.08
SMC4-207ENST00000467263 CCNJQ5T5M9 372 aa2.03□□□□□ -2.08
SMC4-207ENST00000467263 RAET1LQ5VY80 246 aa2.03□□□□□ -2.08
SMC4-207ENST00000467263 TMEM205Q6UW68 189 aa2.03□□□□□ -2.08
SMC4-207ENST00000467263 CALHM1Q8IU99 346 aa2.03□□□□□ -2.08
SMC4-207ENST00000467263 TGIF2LXQ8IUE1 241 aa2.03□□□□□ -2.08
SMC4-207ENST00000467263 GPATCH11Q8N954 259 aa2.03□□□□□ -2.08
SMC4-207ENST00000467263 CAMK2N2Q96S95 79 aa2.03□□□□□ -2.08
SMC4-207ENST00000467263 NT5MQ9NPB1 228 aa2.03□□□□□ -2.08
SMC4-207ENST00000467263 BLOC1S6Q9UL45 172 aa2.03□□□□□ -2.08
SMC4-207ENST00000467263 NPTNQ9Y639 398 aa2.03□□□□□ -2.08
SMC4-207ENST00000467263 IKBKGQ9Y6K9 419 aa2.03□□□□□ -2.08
SMC4-207ENST00000467263 S4R3C0 116 aa2.03□□□□□ -2.08
SMC4-207ENST00000467263 SCN1AP35498 2009 aa2.03□□□□□ -2.08
SMC4-207ENST00000467263 ANKRD12Q6UB98 2062 aa2.02□□□□□ -2.09
SMC4-207ENST00000467263 CNTNAP1P78357 1384 aa2.02□□□□□ -2.09
SMC4-207ENST00000467263 A0A1W2PPE3 182 aa2.02□□□□□ -2.09
SMC4-207ENST00000467263 DPM1O60762 260 aa2.02□□□□□ -2.09
SMC4-207ENST00000467263 SPAG6O75602 509 aa2.02□□□□□ -2.09
SMC4-207ENST00000467263 CEBPDP49716 269 aaPredicted RBP2.02□□□□□ -2.09
SMC4-207ENST00000467263 GPX6P59796 221 aa2.02□□□□□ -2.09
SMC4-207ENST00000467263 PIGHQ14442 188 aaPredicted RBP2.02□□□□□ -2.09
SMC4-207ENST00000467263 FBXW12Q6X9E4 464 aa2.02□□□□□ -2.09
SMC4-207ENST00000467263 EID2Q8N6I1 236 aa2.02□□□□□ -2.09
SMC4-207ENST00000467263 LINC00304Q8N9R0 145 aa2.02□□□□□ -2.09
SMC4-207ENST00000467263 OR4K5Q8NGD3 323 aa2.02□□□□□ -2.09
SMC4-207ENST00000467263 OR10J6PQ8NGY7 276 aa2.02□□□□□ -2.09
SMC4-207ENST00000467263 RHEBL1Q8TAI7 183 aa2.02□□□□□ -2.09
SMC4-207ENST00000467263 CXorf40AQ8TE69 158 aa2.02□□□□□ -2.09
SMC4-207ENST00000467263 FLYWCH2Q96CP2 140 aaKnown RBP2.02□□□□□ -2.09
SMC4-207ENST00000467263 NPY6RQ99463 290 aa2.02□□□□□ -2.09
SMC4-207ENST00000467263 SLC39A3Q9BRY0 314 aa2.02□□□□□ -2.09
SMC4-207ENST00000467263 ROPN1BQ9BZX4 212 aaPredicted RBP2.02□□□□□ -2.09
SMC4-207ENST00000467263 CWH43Q9H720 699 aa2.02□□□□□ -2.09
SMC4-207ENST00000467263 TMED5Q9Y3A6 229 aa2.02□□□□□ -2.09
SMC4-207ENST00000467263 SHANK1Q9Y566 2161 aa2.02□□□□□ -2.09
SMC4-207ENST00000467263 ZNF816-ZNF321PA0A0X1KG74 233 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 OR52A4PA6NMU1 304 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 YIF1AO95070 293 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 KITLGP21583 273 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 DTYMKP23919 212 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 IFNA8P32881 189 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 KIR3DL2P43630 455 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 YWHAGP61981 247 aaKnown RBP eCLIP2.01□□□□□ -2.09
SMC4-207ENST00000467263 TWF1Q12792 350 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 IL24Q13007 206 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 IRF4Q15306 451 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 C6orf226Q5I0X4 101 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 METTL21CQ5VZV1 264 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 BRD3OSQ6XYD6 125 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 KRTAP13-1Q8IUC0 172 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 BHLHE23Q8NDY6 225 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 OR8J1Q8NGP2 316 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 LINC01560Q8TB33 94 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 SERPINB12Q96P63 405 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 SULT4A1Q9BR01 284 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 FAM49BQ9NUQ9 324 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 DDX19AQ9NUU7 478 aaKnown RBP2.01□□□□□ -2.09
SMC4-207ENST00000467263 ST3GAL6Q9Y274 331 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 CAMTA1Q9Y6Y1 1673 aa2.01□□□□□ -2.09
SMC4-207ENST00000467263 COL5A1P20908 1838 aaPredicted RBP2.01□□□□□ -2.09
SMC4-207ENST00000467263 A0A0U1RQV1 116 aa2□□□□□ -2.09
SMC4-207ENST00000467263 CLRN2A0PK11 232 aa2□□□□□ -2.09
SMC4-207ENST00000467263 RAB3BP20337 219 aa2□□□□□ -2.09
SMC4-207ENST00000467263 TPMTP51580 245 aa2□□□□□ -2.09
SMC4-207ENST00000467263 GBX2P52951 348 aaPredicted RBP2□□□□□ -2.09
SMC4-207ENST00000467263 KCNJ2P63252 427 aa2□□□□□ -2.09
SMC4-207ENST00000467263 MXD1Q05195 221 aa2□□□□□ -2.09
SMC4-207ENST00000467263 GPM6BQ13491 265 aa2□□□□□ -2.09
SMC4-207ENST00000467263 TGFBIQ15582 683 aa2□□□□□ -2.09
SMC4-207ENST00000467263 THEM4Q5T1C6 240 aa2□□□□□ -2.09
SMC4-207ENST00000467263 ANKRD26P1Q6NSI1 321 aa2□□□□□ -2.09
SMC4-207ENST00000467263 ZFP1Q6P2D0 407 aa2□□□□□ -2.09
SMC4-207ENST00000467263 PDIK1LQ8N165 341 aa2□□□□□ -2.09
SMC4-207ENST00000467263 TEX9Q8N6V9 391 aa2□□□□□ -2.09
SMC4-207ENST00000467263 GATSQ8NAP1 163 aa2□□□□□ -2.09
SMC4-207ENST00000467263 OR1S2Q8NGQ3 325 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms