RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 H3BN98 237 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 M0R1B8 84 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 CRLF1O75462 422 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 SOX14O95416 240 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 CD8AP01732 235 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 OR8G3PP0DMU2 310 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 ZNF23P17027 643 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 PTAFRP25105 342 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 GUCA1AP43080 201 aaPredicted RBP15.41■□□□□ 0.06
COL7A1-205ENST00000465238 TUBA1BP68363 451 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 TUBA4AP68366 448 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 AGAP6Q5VW22 663 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 DNM1P46Q6ZS02 220 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 TUBA1AQ71U36 451 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 ZDHHC13Q8IUH4 622 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 SVOPLQ8N434 492 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 SLC22A24Q8N4F4 322 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 TEX47Q8TBZ9 253 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 DNAJC9Q8WXX5 260 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 NANOS1Q8WY41 292 aaKnown RBP15.41■□□□□ 0.06
COL7A1-205ENST00000465238 PLA2G12AQ9BZM1 189 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 SEMA6AQ9H2E6 1030 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 MOV10Q9HCE1 1003 aaKnown RBP15.41■□□□□ 0.06
COL7A1-205ENST00000465238 TMEM38BQ9NVV0 291 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 BAIAP2Q9UQB8 552 aa15.41■□□□□ 0.06
COL7A1-205ENST00000465238 RENP00797 406 aa15.4■□□□□ 0.06
COL7A1-205ENST00000465238 TP53P04637 393 aaPredicted RBP15.4■□□□□ 0.06
COL7A1-205ENST00000465238 IGFBP1P08833 259 aaPredicted RBP15.4■□□□□ 0.06
COL7A1-205ENST00000465238 CDKN2AP42771 156 aaKnown RBP15.4■□□□□ 0.06
COL7A1-205ENST00000465238 SGCAQ16586 387 aa15.4■□□□□ 0.06
COL7A1-205ENST00000465238 SLC36A3Q495N2 470 aa15.4■□□□□ 0.06
COL7A1-205ENST00000465238 NRN1LQ496H8 165 aa15.4■□□□□ 0.06
COL7A1-205ENST00000465238 SLC35F1Q5T1Q4 408 aa15.4■□□□□ 0.06
COL7A1-205ENST00000465238 PTCHD4Q6ZW05 846 aa15.4■□□□□ 0.06
COL7A1-205ENST00000465238 PIAS4Q8N2W9 510 aaPredicted RBP15.4■□□□□ 0.06
COL7A1-205ENST00000465238 MAPK1IP1LQ8NDC0 245 aa15.4■□□□□ 0.06
COL7A1-205ENST00000465238 OR2T33Q8NG76 320 aa15.4■□□□□ 0.06
COL7A1-205ENST00000465238 OR8D4Q8NGM9 314 aa15.4■□□□□ 0.06
COL7A1-205ENST00000465238 OR4K13Q8NH42 304 aa15.4■□□□□ 0.06
COL7A1-205ENST00000465238 MDFIQ99750 246 aa15.4■□□□□ 0.06
COL7A1-205ENST00000465238 RERGLQ9H628 205 aa15.4■□□□□ 0.06
COL7A1-205ENST00000465238 SEC61A2Q9H9S3 476 aa15.4■□□□□ 0.06
COL7A1-205ENST00000465238 VSX1Q9NZR4 365 aaPredicted RBP15.4■□□□□ 0.06
COL7A1-205ENST00000465238 REV1Q9UBZ9 1251 aa15.4■□□□□ 0.06
COL7A1-205ENST00000465238 MXRA5Q9NR99 2828 aa15.4■□□□□ 0.06
COL7A1-205ENST00000465238 RTTNQ86VV8 2226 aa15.4■□□□□ 0.06
COL7A1-205ENST00000465238 IGKV1D-43A0A0B4J1Z2 117 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 H3BNX3 289 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 BHLHE40O14503 412 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 MGRN1O60291 552 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 SLC16A7O60669 478 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 NDUFS7O75251 213 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 HLA-HP01893 362 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 CD79AP11912 226 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 OSMP13725 252 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 HIST1H1CP16403 213 aaKnown RBP15.39■□□□□ 0.05
COL7A1-205ENST00000465238 NPR2P20594 1047 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 POU1F1P28069 291 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 MRPS34P82930 218 aaKnown RBP15.39■□□□□ 0.05
COL7A1-205ENST00000465238 LEG1Q6P5S2 330 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 SKA3Q8IX90 412 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 LNX2Q8N448 690 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 OR52E2Q8NGJ4 325 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 STMN2Q93045 179 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 PKP2Q99959 881 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 SH3GL3Q99963 347 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 SYT4Q9H2B2 425 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 KCNN2Q9H2S1 579 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 SIAEQ9HAT2 523 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 S100A14Q9HCY8 104 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 GDF2Q9UK05 429 aaPredicted RBP15.39■□□□□ 0.05
COL7A1-205ENST00000465238 UGT2A1Q9Y4X1 527 aa15.39■□□□□ 0.05
COL7A1-205ENST00000465238 FBN1P35555 2871 aaKnown RBP15.38■□□□□ 0.05
COL7A1-205ENST00000465238 ANK3Q12955 4377 aaKnown RBP15.38■□□□□ 0.05
COL7A1-205ENST00000465238 A0A1W2PPL8 197 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 ERICH4A6NGS2 130 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 TLX2O43763 284 aaPredicted RBP15.38■□□□□ 0.05
COL7A1-205ENST00000465238 KHDRBS3O75525 346 aaKnown RBP15.38■□□□□ 0.05
COL7A1-205ENST00000465238 UBL3O95164 117 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 CBR1P16152 277 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 CD40P25942 277 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 CRABP1P29762 137 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 CDAP32320 146 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 TTKP33981 857 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 ARR3P36575 388 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 PIGFQ07326 219 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.38■□□□□ 0.05
COL7A1-205ENST00000465238 GSG1Q2KHT4 349 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 FAHD1Q6P587 224 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 DNM1P34Q6PK57 102 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 SLC22A25Q6T423 547 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 SLC16A14Q7RTX9 510 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 DEPDC4Q8N2C3 294 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 ICA1LQ8NDH6 482 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 SNX18Q96RF0 628 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 NMNAT3Q96T66 252 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 DHRS9Q9BPW9 319 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 NUAK2Q9H093 628 aa15.38■□□□□ 0.05
COL7A1-205ENST00000465238 PAPOLBQ9NRJ5 636 aaKnown RBP15.38■□□□□ 0.05
COL7A1-205ENST00000465238 POU2F3Q9UKI9 436 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms