RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 PSKH1P11801 424 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 APEHP13798 732 aaKnown RBP10.34□□□□□ -0.75
APTX-213ENST00000465003 TRIP10Q15642 601 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 GSG1Q2KHT4 349 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 SLC16A14Q7RTX9 510 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 C17orf78Q8N4C9 275 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 EME1Q96AY2 570 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 ZNF416Q9BWM5 594 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 TVP23BQ9NYZ1 205 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 STX18Q9P2W9 335 aaKnown RBP10.34□□□□□ -0.75
APTX-213ENST00000465003 B9D1Q9UPM9 204 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 MOKQ9UQ07 419 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 SPG11Q96JI7 2443 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 IGLV1-36A0A0B4J1U3 117 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 ATP6V1G2-DDX39BF2Z307 99 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 HLA-DQA2P01906 255 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 PCYT1AP49585 367 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 ZNF133P52736 654 aaPredicted RBP10.34□□□□□ -0.75
APTX-213ENST00000465003 RAB1AP62820 205 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 CDK5Q00535 292 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 DAG1Q14118 895 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 RAB39AQ14964 217 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 PLBD1Q6P4A8 553 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 CORO6Q6QEF8 472 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 ZNF584Q8IVC4 421 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 LINC00346Q8IVM7 164 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 GALNT4Q8N4A0 578 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 PROKR2Q8NFJ6 384 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 AKR7LQ8NHP1 331 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 RADILQ96JH8 1075 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 DDOQ99489 341 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 RBM4Q9BWF3 364 aaKnown RBP10.34□□□□□ -0.75
APTX-213ENST00000465003 OR51B6Q9H340 312 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 RNF121Q9H920 327 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 POLE4Q9NR33 117 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 AMDHD2Q9Y303 409 aa10.34□□□□□ -0.75
APTX-213ENST00000465003 RIIAD1A6NNX1 92 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 CENPBD1B2RD01 187 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 SURF4O15260 269 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 SNAP29O95721 258 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 TFP02787 698 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 ZNF32P17041 273 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 CD40P25942 277 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 CALCRP30988 508 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 RANBP1P43487 201 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 MRPS34P82930 218 aaKnown RBP10.33□□□□□ -0.76
APTX-213ENST00000465003 RIPK1Q13546 671 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 ENDOGQ14249 297 aaKnown RBP10.33□□□□□ -0.76
APTX-213ENST00000465003 DAZAP2Q15038 168 aaPredicted RBP10.33□□□□□ -0.76
APTX-213ENST00000465003 BEX5Q5H9J7 111 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 NCMAPQ5T1S8 102 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 SLC22A25Q6T423 547 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 ZBTB49Q6ZSB9 765 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 ZNF627Q7L945 461 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 P2RY8Q86VZ1 359 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 CDC20BQ86Y33 519 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 PARP8Q8N3A8 854 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 ZNF511Q8NB15 262 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 OR6K6Q8NGW6 343 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 SMAP2Q8WU79 429 aaPredicted RBP10.33□□□□□ -0.76
APTX-213ENST00000465003 C11orf40Q8WZ69 217 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 SLC38A2Q96QD8 506 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 IL4I1Q96RQ9 567 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 RBM4BQ9BQ04 359 aaKnown RBP10.33□□□□□ -0.76
APTX-213ENST00000465003 GRIP2Q9C0E4 1043 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 OR10A4Q9H209 315 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 OR51V1Q9H2C8 321 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 UBTD1Q9HAC8 227 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 HINT3Q9NQE9 182 aaKnown RBP10.33□□□□□ -0.76
APTX-213ENST00000465003 CMC2Q9NRP2 79 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 B3GNT2Q9NY97 397 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 AASSQ9UDR5 926 aa10.33□□□□□ -0.76
APTX-213ENST00000465003 ARPC4-TTLL3A0A0A6YYG9 625 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 FAM221AA4D161 298 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 A6NHS1 94 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 IDH3BO43837 385 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 PRKYO43930 277 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 KHDRBS3O75525 346 aaKnown RBP10.32□□□□□ -0.76
APTX-213ENST00000465003 FARS2O95363 451 aaKnown RBP10.32□□□□□ -0.76
APTX-213ENST00000465003 WNT11O96014 354 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 ZNF3P17036 446 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 MSR1P21757 451 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 BLMHQ13867 455 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 SNAPC1Q16533 368 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 ZNF704Q6ZNC4 412 aaPredicted RBP10.32□□□□□ -0.76
APTX-213ENST00000465003 PAQR4Q8N4S7 273 aaPredicted RBP10.32□□□□□ -0.76
APTX-213ENST00000465003 LILRB1Q8NHL6 650 aaPredicted RBP10.32□□□□□ -0.76
APTX-213ENST00000465003 UBE2FQ969M7 185 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 TSC22D3Q99576 134 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 ESRP2Q9H6T0 727 aaKnown RBP10.32□□□□□ -0.76
APTX-213ENST00000465003 WDR76Q9H967 626 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 SIAEQ9HAT2 523 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 ASH2LQ9UBL3 628 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 POU2F3Q9UKI9 436 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 SHISA9B4DS77 424 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 RAB36O95755 333 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 IGKV3-15P01624 115 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 GAAP10253 952 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 NR2C1P13056 603 aa10.32□□□□□ -0.76
APTX-213ENST00000465003 SPI1P17947 270 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms