RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 ACTR6Q9GZN1 396 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 MED20Q9H944 212 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 POLE4Q9NR33 117 aa10.15□□□□□ -0.79
SCN9A-204ENST00000452182 A0A1W2PPL8 197 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 SLC22A31A6NKX4 558 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 CLIC3O95833 236 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 GYPBP06028 91 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 CLUP10909 449 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 IGFBP2P18065 325 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 MSR1P21757 451 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 FMO3P31513 532 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 CDAP32320 146 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 ISL1P61371 349 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 LSM6P62312 80 aaKnown RBP10.14□□□□□ -0.79
SCN9A-204ENST00000452182 TEKQ02763 1124 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 TMED1Q13445 227 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 MEPCEQ7L2J0 689 aaKnown RBP10.14□□□□□ -0.79
SCN9A-204ENST00000452182 C8orf59Q8N0T1 100 aaPredicted RBP10.14□□□□□ -0.79
SCN9A-204ENST00000452182 ACBD4Q8NC06 268 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 BBS1Q8NFJ9 593 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 ZNRF4Q8WWF5 429 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 HSD17B8Q92506 261 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 RFKQ969G6 155 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 UBE2FQ969M7 185 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 OTULINQ96BN8 352 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 S100PBPQ96BU1 408 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 Q96MT0 163 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 TEAD3Q99594 435 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 ANKRD60Q9BZ19 345 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 OR51V1Q9H2C8 321 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 RERGLQ9H628 205 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 MARCH7Q9H992 704 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 SEC61A2Q9H9S3 476 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 MOV10Q9HCE1 1003 aaKnown RBP10.14□□□□□ -0.79
SCN9A-204ENST00000452182 SLC17A5Q9NRA2 495 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 HAO2Q9NYQ3 351 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 H2AFY2Q9P0M6 372 aaPredicted RBP10.14□□□□□ -0.79
SCN9A-204ENST00000452182 RAB26Q9ULW5 256 aa10.14□□□□□ -0.79
SCN9A-204ENST00000452182 HELZ2Q9BYK8 2649 aaKnown RBP10.13□□□□□ -0.79
SCN9A-204ENST00000452182 SNTNA6NMZ2 147 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 SEC14L2O76054 403 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 TFP02787 698 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 CST2P09228 141 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 GNAO1P09471 354 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 GRNP28799 593 aaKnown RBP10.13□□□□□ -0.79
SCN9A-204ENST00000452182 HOXC12P31275 282 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 PYCR1P32322 319 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 APOFQ13790 326 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 GGTLC2Q14390 218 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 MAD2L1BPQ15013 274 aaPredicted RBP10.13□□□□□ -0.79
SCN9A-204ENST00000452182 TSC22D1Q15714 1073 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 PCK2Q16822 640 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 HIKESHIQ53FT3 197 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 KLHL12Q53G59 568 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 C6orf52Q5T4I8 152 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 LCN1P1Q5VSP4 162 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 KLHL24Q6TFL4 600 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 SYT9Q86SS6 491 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 SKA3Q8IX90 412 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 OR51L1Q8NGJ5 315 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 FBLIM1Q8WUP2 373 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 ZNF582Q96NG8 517 aaPredicted RBP10.13□□□□□ -0.79
SCN9A-204ENST00000452182 RASSF1Q9NS23 344 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 ZNF224Q9NZL3 707 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 NDRG3Q9UGV2 375 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 KCNG2Q9UJ96 466 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.13□□□□□ -0.79
SCN9A-204ENST00000452182 AMDHD2Q9Y303 409 aa10.13□□□□□ -0.79
SCN9A-204ENST00000452182 A0A096LPE4 126 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 A0A1W2PPZ6 126 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 CCDC182A6NF36 153 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 FAM171A2A8MVW0 826 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 SCG5P05408 212 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 MYF6P23409 242 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 HTR1FP30939 366 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 CDH11P55287 796 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 UBE2NP61088 152 aaKnown RBP10.12□□□□□ -0.79
SCN9A-204ENST00000452182 IL5RAQ01344 420 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 DBPQ10586 325 aaPredicted RBP10.12□□□□□ -0.79
SCN9A-204ENST00000452182 SGCAQ16586 387 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 SLC36A2Q495M3 483 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 TEX30Q5JUR7 227 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 BCDIN3DQ7Z5W3 292 aaKnown RBP10.12□□□□□ -0.79
SCN9A-204ENST00000452182 THAP5Q7Z6K1 395 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 FAM169BQ8N8A8 192 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 WDR31Q8NA23 367 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 OR6K6Q8NGW6 343 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 APH1BQ8WW43 257 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 NANOS1Q8WY41 292 aaKnown RBP10.12□□□□□ -0.79
SCN9A-204ENST00000452182 C11orf40Q8WZ69 217 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 MUCL1Q96DR8 90 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 MRPL22Q9NWU5 206 aaKnown RBP10.12□□□□□ -0.79
SCN9A-204ENST00000452182 B3GNT2Q9NY97 397 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 WARS2Q9UGM6 360 aaKnown RBP10.12□□□□□ -0.79
SCN9A-204ENST00000452182 SLC25A15Q9Y619 301 aa10.12□□□□□ -0.79
SCN9A-204ENST00000452182 SPTBN1Q01082 2364 aaKnown RBP10.12□□□□□ -0.79
SCN9A-204ENST00000452182 COL12A1Q99715 3063 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 SH3D21A4FU49 640 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 TUBAL3A6NHL2 446 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 C12orf71A8MTZ7 269 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms