RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 CSF1P09603 554 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR4A8P0C604 315 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 DAOP14920 347 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 GPX3P22352 226 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 GIPRP48546 466 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF81P51508 661 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 CTU2Q2VPK5 515 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 CEACAM16Q2WEN9 425 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 CCDC58Q4VC31 144 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF468Q5VIY5 522 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 ASRGL1Q7L266 308 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 BIVMQ86UB2 503 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR52E2Q8NGJ4 325 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 BTBD10Q9BSF8 475 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 ELOVL5Q9NYP7 299 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 STEAP1Q9UHE8 339 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 KLHL21Q9UJP4 597 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 HIF3AQ9Y2N7 669 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 HRH3Q9Y5N1 445 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 PLXND1Q9Y4D7 1925 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 PTGES3LE9PB15 166 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 M0R036 132 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 M0R082 166 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 M0R3H8 397 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 ACOT8O14734 319 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 FUCA1P04066 466 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 SERPINA5P05154 406 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 PSMB9P28065 219 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 GPR4P46093 362 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 RAB4BP61018 213 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 GALEQ14376 348 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 S100A7AQ86SG5 101 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR6K3Q8NGY3 331 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR4F5Q8NH21 305 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 BPIFA2Q96DR5 249 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 ALKBH3Q96Q83 286 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 TBX5Q99593 518 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 TREX2Q9BQ50 279 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 ATG101Q9BSB4 218 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 MKS1Q9NXB0 559 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 PDP2Q9P2J9 529 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF69Q9UC07 566 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 CSPG4Q6UVK1 2322 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 LOC110117498-PIK3R3F6TDL0 507 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 SGCEO43556 437 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 CBX6O95503 412 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 DCKP27707 260 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 PRDX6P30041 224 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 YBX1P67809 324 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 TUBA4AP68366 448 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 HOXC5Q00444 222 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZIK1Q3SY52 487 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF684Q5T5D7 378 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 HIST2H2BCQ6DN03 193 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR2T5Q6IEZ7 315 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 AQP11Q8NBQ7 271 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR4K5Q8NGD3 323 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR2T29Q8NH02 315 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR11A1Q9GZK7 315 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 PTTG3PQ9NZH4 202 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF391Q9UJN7 358 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 C15orf41Q9Y2V0 281 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 ABCA12Q86UK0 2595 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 A0A1B0GWA3 101 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 TMPRSS2O15393 492 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 RAP2AP10114 183 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 PGAM2P15259 253 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 FOXL2P58012 376 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 SRSF6Q13247 344 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 PDCD1Q15116 288 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 RPS26P11Q5JNZ5 115 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 FOXRED2Q8IWF2 684 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 TM4SF19Q96DZ7 209 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 TMEM246Q9BRR3 403 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 GREB1LQ9C091 1923 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 FANCMQ8IYD8 2048 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 TRAV38-1A0A0B4J264 116 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF785A8K8V0 405 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR7A17O14581 309 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 DOK2O60496 412 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 GALNSP34059 522 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 CA7P43166 264 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 ATP1B3P54709 279 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 BCL2L15Q5TBC7 163 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF704Q6ZNC4 412 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 SHISA5Q8N114 240 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZBTB8BQ8NAP8 495 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 CNOT9Q92600 299 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 SDF2Q99470 211 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 PIP5K1AQ99755 562 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 HEXA-AS1Q9H8Q6 139 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 RNF114Q9Y508 228 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 MYLKQ15746 1914 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 DENND4AQ7Z401 1863 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 TCRBV4S1A1TA0A5B7 111 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 TERTO14746 1132 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 F13BP05160 661 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 RHCEP18577 417 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 DIO1P49895 249 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 E2F2Q14209 437 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms