RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 AVL9Q8NBF6 648 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 CD300LFQ8TDQ1 290 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 GAL3ST3Q96A11 431 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 TCTN2Q96GX1 697 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 S100A13Q99584 98 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 CDC6Q99741 560 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 TAF9BQ9HBM6 251 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 ZDHHC8Q9ULC8 765 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 TMED7Q9Y3B3 224 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 TRBV6-7A0A0A0MS04 114 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 H0YIZ8 118 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 ERCC1P07992 297 aaPredicted RBP8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 HOXA6P31267 233 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 ARL6IP6Q8N6S5 226 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 ZNF615Q8N8J6 731 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 OR7G2Q8NG99 324 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 OR4S1Q8NGB4 309 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 OVCA2Q8WZ82 227 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 NKX3-1Q99801 234 aaPredicted RBP8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 TP53TG5Q9Y2B4 290 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 A0A1B0GTH9 108 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 A0A1W2PR48 441 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 PRR32B1ATL7 298 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 SEC14L6B5MCN3 397 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 OR2C1O95371 312 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 CSRP1P21291 193 aaKnown RBP8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 PSMB5P28074 263 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 RPL4P36578 427 aaKnown RBP8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 SLC6A9P48067 706 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 NUBP1P53384 320 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 LSM6P62312 80 aaKnown RBP8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 EBPQ15125 230 aaKnown RBP8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 RAB11BQ15907 218 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 RNASE10Q5GAN6 216 aaKnown RBP8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 SLC39A5Q6ZMH5 540 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 Q6ZVU0 165 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 OR5AR1Q8NGP9 310 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 RPS4Y2Q8TD47 263 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 NMNAT3Q96T66 252 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 PRRT1Q99946 306 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 LMAN1LQ9HAT1 526 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 PELI2Q9HAT8 420 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 FRRS1LQ9P0K9 344 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 LOC100289279A0A1B0GTE1 492 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 TSPAN15O95858 294 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 PRKAR2AP13861 404 aaKnown RBP8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 MRPL2Q5T653 305 aaKnown RBP8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 RPL7L1Q6DKI1 246 aaKnown RBP8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 ZNF529Q6P280 563 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 ZNF584Q8IVC4 421 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 OR10AC1Q8NH08 325 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 COL26A1Q96A83 441 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 ASB16Q96NS5 453 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 SLC22A12Q96S37 553 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 MACROD1Q9BQ69 325 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 EIF5A2Q9GZV4 153 aaKnown RBP8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 ADAM19Q9H013 955 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 PARP11Q9NR21 331 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 SERTAD3Q9UJW9 196 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 PCYT1BQ9Y5K3 369 aaPredicted RBP8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 TBC1D3DA0A087WVF3 549 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 TBC1D3IA0A087WXS9 549 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 TBC1D3FA6NER0 549 aaPredicted RBP8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 ZNF726A6NNF4 738 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 TBC1D3LB9A6J9 549 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 UMAD1C9J7I0 102 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 IL2RAP01589 272 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 HMGA1P17096 107 aaKnown RBP8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 LSSP48449 732 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 PCP4P48539 62 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 SULT1A2P50226 295 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 ZNF84P51523 738 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 C14orf28Q4W4Y0 310 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 EXOSC6Q5RKV6 272 aaKnown RBP8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 TBC1D3CQ6IPX1 549 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 TBC1D3Q8IZP1 549 aaPredicted RBP8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 ADAD1Q96M93 576 aaKnown RBP8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 GPR61Q9BZJ8 451 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 OR2AG1Q9H205 316 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 IKZF2Q9UKS7 526 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 TRBV5-5A0A0J9YX44 114 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 ELOA3DA6NLF2 546 aaPredicted RBP8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 PPP1R2P9O14990 202 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 CTSAP10619 480 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 SLC2A1P11166 492 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 NR2C1P13056 603 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 G0S2P27469 103 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 RAP1AP62834 184 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 TDGQ13569 410 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 RHEBQ15382 184 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 OR8G1Q15617 311 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 ZNF674Q2M3X9 581 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 ELOA3BQ3SY89 546 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 C19orf47Q8N9M1 422 aaKnown RBP8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 ELOA3Q8NG57 546 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 INSM2Q96T92 566 aaPredicted RBP8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 MRPL37Q9BZE1 423 aaKnown RBP8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 ULBP3Q9BZM4 244 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 NMES1Q9C002 83 aa8.53□□□□□ -1.04
SYNPO2-204ENST00000448416 COMMD4Q9H0A8 199 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms