RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 IL5RAQ01344 420 aa2.58□□□□□ -2
PMS1-215ENST00000447232 GTF2H2Q13888 395 aa2.58□□□□□ -2
PMS1-215ENST00000447232 MFSD13AQ14CX5 517 aa2.58□□□□□ -2
PMS1-215ENST00000447232 ZNF181Q2M3W8 571 aa2.58□□□□□ -2
PMS1-215ENST00000447232 ZNF718Q3SXZ3 478 aa2.58□□□□□ -2
PMS1-215ENST00000447232 GGTA1PQ4G0N0 100 aa2.58□□□□□ -2
PMS1-215ENST00000447232 THEM4Q5T1C6 240 aa2.58□□□□□ -2
PMS1-215ENST00000447232 PDZK1Q5T2W1 519 aa2.58□□□□□ -2
PMS1-215ENST00000447232 C9orf66Q5T8R8 295 aa2.58□□□□□ -2
PMS1-215ENST00000447232 RNASEH2BQ5TBB1 312 aaKnown RBP2.58□□□□□ -2
PMS1-215ENST00000447232 TMEM225Q6GV28 225 aa2.58□□□□□ -2
PMS1-215ENST00000447232 NOXRED1Q6NXP6 359 aa2.58□□□□□ -2
PMS1-215ENST00000447232 GTF2H2CQ6P1K8 395 aa2.58□□□□□ -2
PMS1-215ENST00000447232 LINC00336Q6ZUF6 198 aa2.58□□□□□ -2
PMS1-215ENST00000447232 ZNF551Q7Z340 670 aaPredicted RBP2.58□□□□□ -2
PMS1-215ENST00000447232 VRK2Q86Y07 508 aa2.58□□□□□ -2
PMS1-215ENST00000447232 UBL4BQ8N7F7 174 aa2.58□□□□□ -2
PMS1-215ENST00000447232 MAPKAPK5-AS1Q8N8E1 139 aa2.58□□□□□ -2
PMS1-215ENST00000447232 OR51D1Q8NGF3 324 aa2.58□□□□□ -2
PMS1-215ENST00000447232 STAG3L4Q8TBR4 150 aa2.58□□□□□ -2
PMS1-215ENST00000447232 KLF14Q8TD94 323 aaPredicted RBP2.58□□□□□ -2
PMS1-215ENST00000447232 NTN5Q8WTR8 489 aaPredicted RBP2.58□□□□□ -2
PMS1-215ENST00000447232 C17orf50Q8WW18 174 aa2.58□□□□□ -2
PMS1-215ENST00000447232 ITLN1Q8WWA0 313 aa2.58□□□□□ -2
PMS1-215ENST00000447232 RORBQ92753 470 aa2.58□□□□□ -2
PMS1-215ENST00000447232 CDS1Q92903 461 aa2.58□□□□□ -2
PMS1-215ENST00000447232 OR2M2Q96R28 347 aa2.58□□□□□ -2
PMS1-215ENST00000447232 NKX3-1Q99801 234 aaPredicted RBP2.58□□□□□ -2
PMS1-215ENST00000447232 BPIFA3Q9BQP9 254 aa2.58□□□□□ -2
PMS1-215ENST00000447232 EBPLQ9BY08 206 aa2.58□□□□□ -2
PMS1-215ENST00000447232 PIGUQ9H490 435 aa2.58□□□□□ -2
PMS1-215ENST00000447232 ALG9Q9H6U8 611 aa2.58□□□□□ -2
PMS1-215ENST00000447232 CDH20Q9HBT6 801 aa2.58□□□□□ -2
PMS1-215ENST00000447232 SIRT7Q9NRC8 400 aa2.58□□□□□ -2
PMS1-215ENST00000447232 GLS2Q9UI32 602 aa2.58□□□□□ -2
PMS1-215ENST00000447232 OSGIN1Q9UJX0 560 aa2.58□□□□□ -2
PMS1-215ENST00000447232 PACSIN2Q9UNF0 486 aaPredicted RBP2.58□□□□□ -2
PMS1-215ENST00000447232 RASD1Q9Y272 281 aa2.58□□□□□ -2
PMS1-215ENST00000447232 TMED7Q9Y3B3 224 aa2.58□□□□□ -2
PMS1-215ENST00000447232 ANGPTL3Q9Y5C1 460 aa2.58□□□□□ -2
PMS1-215ENST00000447232 MYCBP2O75592 4640 aa2.58□□□□□ -2
PMS1-215ENST00000447232 SRRM2Q9UQ35 2752 aaKnown RBP2.58□□□□□ -2
PMS1-215ENST00000447232 MEIOCA2RUB1 952 aa2.58□□□□□ -2
PMS1-215ENST00000447232 MIF4GDA9UHW6 222 aaKnown RBP2.58□□□□□ -2
PMS1-215ENST00000447232 SUPT3HB4E1H0 165 aa2.58□□□□□ -2
PMS1-215ENST00000447232 H3BSA7 217 aa2.58□□□□□ -2
PMS1-215ENST00000447232 SUPT3HO75486 399 aa2.58□□□□□ -2
PMS1-215ENST00000447232 NUDT3O95989 172 aa2.58□□□□□ -2
PMS1-215ENST00000447232 CYB5R3P00387 301 aaPredicted RBP2.58□□□□□ -2
PMS1-215ENST00000447232 UBTFL6P0CB48 400 aaPredicted RBP2.58□□□□□ -2
PMS1-215ENST00000447232 EEF1B2P24534 225 aaKnown RBP2.58□□□□□ -2
PMS1-215ENST00000447232 NTSP30990 170 aa2.58□□□□□ -2
PMS1-215ENST00000447232 PGM1P36871 562 aa2.58□□□□□ -2
PMS1-215ENST00000447232 VDAC2P45880 294 aaPredicted RBP2.58□□□□□ -2
PMS1-215ENST00000447232 GSTM5P46439 218 aa2.58□□□□□ -2
PMS1-215ENST00000447232 BMXP51813 675 aa2.58□□□□□ -2
PMS1-215ENST00000447232 AQP5P55064 265 aa2.58□□□□□ -2
PMS1-215ENST00000447232 CLDN17P56750 224 aa2.58□□□□□ -2
PMS1-215ENST00000447232 ACSM1Q08AH1 577 aa2.58□□□□□ -2
PMS1-215ENST00000447232 IFT88Q13099 833 aa2.58□□□□□ -2
PMS1-215ENST00000447232 CNN3Q15417 329 aaKnown RBP2.58□□□□□ -2
PMS1-215ENST00000447232 OR7A5Q15622 319 aa2.58□□□□□ -2
PMS1-215ENST00000447232 ZNF141Q15928 474 aa2.58□□□□□ -2
PMS1-215ENST00000447232 MTX3Q5HYI7 312 aa2.58□□□□□ -2
PMS1-215ENST00000447232 SPATA46Q5T0L3 261 aa2.58□□□□□ -2
PMS1-215ENST00000447232 DCST2Q5T1A1 773 aa2.58□□□□□ -2
PMS1-215ENST00000447232 METTL2BQ6P1Q9 378 aaKnown RBP2.58□□□□□ -2
PMS1-215ENST00000447232 EMBQ6PCB8 327 aa2.58□□□□□ -2
PMS1-215ENST00000447232 Q6ZR03 302 aa2.58□□□□□ -2
PMS1-215ENST00000447232 SKA3Q8IX90 412 aa2.58□□□□□ -2
PMS1-215ENST00000447232 PNKDQ8N490 385 aa2.58□□□□□ -2
PMS1-215ENST00000447232 ICA1LQ8NDH6 482 aa2.58□□□□□ -2
PMS1-215ENST00000447232 ZNF382Q96SR6 550 aa2.58□□□□□ -2
PMS1-215ENST00000447232 PRSS22Q9GZN4 317 aa2.58□□□□□ -2
PMS1-215ENST00000447232 C1orf198Q9H425 327 aa2.58□□□□□ -2
PMS1-215ENST00000447232 CAB39LQ9H9S4 337 aa2.58□□□□□ -2
PMS1-215ENST00000447232 ABHD10Q9NUJ1 306 aa2.58□□□□□ -2
PMS1-215ENST00000447232 VPS29Q9UBQ0 182 aa2.58□□□□□ -2
PMS1-215ENST00000447232 TBK1Q9UHD2 729 aa2.58□□□□□ -2
PMS1-215ENST00000447232 GNG14A0A1W2PPG7 69 aa2.57□□□□□ -2
PMS1-215ENST00000447232 CCDC189A1A4V9 331 aa2.57□□□□□ -2
PMS1-215ENST00000447232 OR10H3O60404 316 aa2.57□□□□□ -2
PMS1-215ENST00000447232 FCMRO60667 390 aa2.57□□□□□ -2
PMS1-215ENST00000447232 GLRA3O75311 464 aa2.57□□□□□ -2
PMS1-215ENST00000447232 CDK2AP2O75956 126 aa2.57□□□□□ -2
PMS1-215ENST00000447232 CSTAP01040 98 aa2.57□□□□□ -2
PMS1-215ENST00000447232 TNFSF4P23510 183 aa2.57□□□□□ -2
PMS1-215ENST00000447232 WNT5AP41221 380 aa2.57□□□□□ -2
PMS1-215ENST00000447232 HTR3AP46098 478 aa2.57□□□□□ -2
PMS1-215ENST00000447232 KCNJ1P48048 391 aa2.57□□□□□ -2
PMS1-215ENST00000447232 UBE2E1P51965 193 aa2.57□□□□□ -2
PMS1-215ENST00000447232 PRKAG1P54619 331 aa2.57□□□□□ -2
PMS1-215ENST00000447232 PRB3Q04118 309 aaPredicted RBP2.57□□□□□ -2
PMS1-215ENST00000447232 DLG1Q12959 904 aa2.57□□□□□ -2
PMS1-215ENST00000447232 HSPB3Q12988 150 aa2.57□□□□□ -2
PMS1-215ENST00000447232 ZKSCAN8Q15776 578 aaPredicted RBP2.57□□□□□ -2
PMS1-215ENST00000447232 TBC1D28Q2M2D7 210 aa2.57□□□□□ -2
PMS1-215ENST00000447232 SGO1Q5FBB7 561 aa2.57□□□□□ -2
PMS1-215ENST00000447232 FAM201AQ5SY85 155 aa2.57□□□□□ -2
PMS1-215ENST00000447232 FAM219BQ5XKK7 198 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms