RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 ATP23Q9Y6H3 246 aa15.92■□□□□ 0.14
HLA-F-220ENST00000434407 FLNAP21333 2647 aaKnown RBP15.92■□□□□ 0.14
HLA-F-220ENST00000434407 DEAF1O75398 565 aaPredicted RBP15.91■□□□□ 0.14
HLA-F-220ENST00000434407 TIPRLO75663 272 aa15.91■□□□□ 0.14
HLA-F-220ENST00000434407 CIB2O75838 187 aa15.91■□□□□ 0.14
HLA-F-220ENST00000434407 SCG5P05408 212 aa15.91■□□□□ 0.14
HLA-F-220ENST00000434407 CST2P09228 141 aa15.91■□□□□ 0.14
HLA-F-220ENST00000434407 NKX6-1P78426 367 aaPredicted RBP15.91■□□□□ 0.14
HLA-F-220ENST00000434407 RAB39AQ14964 217 aa15.91■□□□□ 0.14
HLA-F-220ENST00000434407 SGCAQ16586 387 aa15.91■□□□□ 0.14
HLA-F-220ENST00000434407 ZNF362Q5T0B9 420 aaPredicted RBP15.91■□□□□ 0.14
HLA-F-220ENST00000434407 C11orf71Q6IPW1 123 aa15.91■□□□□ 0.14
HLA-F-220ENST00000434407 TMEM53Q6P2H8 277 aa15.91■□□□□ 0.14
HLA-F-220ENST00000434407 LNX2Q8N448 690 aa15.91■□□□□ 0.14
HLA-F-220ENST00000434407 LRRC18Q8N456 261 aa15.91■□□□□ 0.14
HLA-F-220ENST00000434407 OR52L1Q8NGH7 329 aa15.91■□□□□ 0.14
HLA-F-220ENST00000434407 TMEM171Q8WVE6 324 aa15.91■□□□□ 0.14
HLA-F-220ENST00000434407 FBXO17Q96EF6 278 aa15.91■□□□□ 0.14
HLA-F-220ENST00000434407 WACQ9BTA9 647 aa15.91■□□□□ 0.14
HLA-F-220ENST00000434407 NUAK2Q9H093 628 aa15.91■□□□□ 0.14
HLA-F-220ENST00000434407 PDP1Q9P0J1 537 aaPredicted RBP15.91■□□□□ 0.14
HLA-F-220ENST00000434407 REV1Q9UBZ9 1251 aa15.91■□□□□ 0.14
HLA-F-220ENST00000434407 AP4S1Q9Y587 144 aa15.91■□□□□ 0.14
HLA-F-220ENST00000434407 DCTN6O00399 190 aa15.9■□□□□ 0.14
HLA-F-220ENST00000434407 SLC16A7O60669 478 aa15.9■□□□□ 0.14
HLA-F-220ENST00000434407 KHDRBS3O75525 346 aaKnown RBP15.9■□□□□ 0.14
HLA-F-220ENST00000434407 IGFBP1P08833 259 aaPredicted RBP15.9■□□□□ 0.14
HLA-F-220ENST00000434407 MSR1P21757 451 aa15.9■□□□□ 0.14
HLA-F-220ENST00000434407 LAP3P28838 519 aa15.9■□□□□ 0.14
HLA-F-220ENST00000434407 CRABP1P29762 137 aa15.9■□□□□ 0.14
HLA-F-220ENST00000434407 APOBEC3AP31941 199 aaPredicted RBP15.9■□□□□ 0.14
HLA-F-220ENST00000434407 GUCA1AP43080 201 aaPredicted RBP15.9■□□□□ 0.14
HLA-F-220ENST00000434407 ENDOGQ14249 297 aaKnown RBP15.9■□□□□ 0.14
HLA-F-220ENST00000434407 ATP6AP1Q15904 470 aa15.9■□□□□ 0.14
HLA-F-220ENST00000434407 CLEC12AQ5QGZ9 265 aa15.9■□□□□ 0.14
HLA-F-220ENST00000434407 SHQ1Q6PI26 577 aaKnown RBP15.9■□□□□ 0.14
HLA-F-220ENST00000434407 HS3ST5Q8IZT8 346 aa15.9■□□□□ 0.14
HLA-F-220ENST00000434407 NPEPL1Q8NDH3 523 aa15.9■□□□□ 0.14
HLA-F-220ENST00000434407 OR4K13Q8NH42 304 aa15.9■□□□□ 0.14
HLA-F-220ENST00000434407 NMNAT3Q96T66 252 aa15.9■□□□□ 0.14
HLA-F-220ENST00000434407 KCNN2Q9H2S1 579 aa15.9■□□□□ 0.14
HLA-F-220ENST00000434407 CXorf56Q9H5V9 222 aa15.9■□□□□ 0.14
HLA-F-220ENST00000434407 TEP1Q99973 2627 aaKnown RBP15.9■□□□□ 0.14
HLA-F-220ENST00000434407 CHD3Q12873 2000 aaKnown RBP15.89■□□□□ 0.13
HLA-F-220ENST00000434407 IGLV1-36A0A0B4J1U3 117 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 SMPD2O60906 423 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 E2F6O75461 281 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 ANXA8P13928 327 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 ZNF32P17041 273 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 NR4A1P22736 598 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 NOS3P29474 1203 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 FABP6P51161 128 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 ACTR3P61158 418 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 KCNMB1Q16558 191 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 AGAP6Q5VW22 663 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 LEG1Q6P5S2 330 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 SYT9Q86SS6 491 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 ZBTB46Q86UZ6 589 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 JAZF1Q86VZ6 243 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 KRTAP1-3Q8IUG1 177 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 GLB1L2Q8IW92 636 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 FBXL14Q8N1E6 418 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 MUC15Q8N387 334 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 TSSK2Q96PF2 358 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 ZNF416Q9BWM5 594 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 TSSK6Q9BXA6 273 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 RACGAP1Q9H0H5 632 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 C1orf198Q9H425 327 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 ZNF442Q9H7R0 627 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 RNF121Q9H920 327 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 CA10Q9NS85 328 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 CBLN4Q9NTU7 201 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 TBC1D23Q9NUY8 699 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 B9D1Q9UPM9 204 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 BAIAP2Q9UQB8 552 aa15.89■□□□□ 0.13
HLA-F-220ENST00000434407 COA3Q9Y2R0 106 aaPredicted RBP15.89■□□□□ 0.13
HLA-F-220ENST00000434407 A0A1W2PPL8 197 aa15.88■□□□□ 0.13
HLA-F-220ENST00000434407 OR6C68A6NDL8 312 aa15.88■□□□□ 0.13
HLA-F-220ENST00000434407 SOX14O95416 240 aa15.88■□□□□ 0.13
HLA-F-220ENST00000434407 RENP00797 406 aa15.88■□□□□ 0.13
HLA-F-220ENST00000434407 PTHP01270 115 aa15.88■□□□□ 0.13
HLA-F-220ENST00000434407 PRKACGP22612 351 aa15.88■□□□□ 0.13
HLA-F-220ENST00000434407 PTH2RP49190 550 aa15.88■□□□□ 0.13
HLA-F-220ENST00000434407 PCBD1P61457 104 aa15.88■□□□□ 0.13
HLA-F-220ENST00000434407 LSM6P62312 80 aaKnown RBP15.88■□□□□ 0.13
HLA-F-220ENST00000434407 PSG4Q00888 419 aa15.88■□□□□ 0.13
HLA-F-220ENST00000434407 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.88■□□□□ 0.13
HLA-F-220ENST00000434407 MST1LQ2TV78 715 aa15.88■□□□□ 0.13
HLA-F-220ENST00000434407 PABPC1L2AQ5JQF8 200 aa15.88■□□□□ 0.13
HLA-F-220ENST00000434407 SLC35F1Q5T1Q4 408 aa15.88■□□□□ 0.13
HLA-F-220ENST00000434407 OR6V1Q8N148 313 aa15.88■□□□□ 0.13
HLA-F-220ENST00000434407 CPEB3Q8NE35 698 aaKnown RBP15.88■□□□□ 0.13
HLA-F-220ENST00000434407 OR2T33Q8NG76 320 aa15.88■□□□□ 0.13
HLA-F-220ENST00000434407 OR4Q3Q8NH05 313 aa15.88■□□□□ 0.13
HLA-F-220ENST00000434407 CCNB1IP1Q9NPC3 277 aa15.88■□□□□ 0.13
HLA-F-220ENST00000434407 TIMM10BQ9Y5J6 103 aa15.88■□□□□ 0.13
HLA-F-220ENST00000434407 FKBP7Q9Y680 259 aa15.88■□□□□ 0.13
HLA-F-220ENST00000434407 SNAP29O95721 258 aa15.87■□□□□ 0.13
HLA-F-220ENST00000434407 GAAP10253 952 aa15.87■□□□□ 0.13
HLA-F-220ENST00000434407 FCGR1AP12314 374 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms