RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 HCAR1Q9BXC0 346 aa9.65□□□□□ -0.86
CHD4-202ENST00000430771 ANKRD60Q9BZ19 345 aa9.65□□□□□ -0.86
CHD4-202ENST00000430771 SIAEQ9HAT2 523 aa9.65□□□□□ -0.86
CHD4-202ENST00000430771 SLC24A3Q9HC58 644 aa9.65□□□□□ -0.86
CHD4-202ENST00000430771 CCNB1IP1Q9NPC3 277 aa9.65□□□□□ -0.86
CHD4-202ENST00000430771 SLC17A5Q9NRA2 495 aa9.65□□□□□ -0.86
CHD4-202ENST00000430771 RASSF1Q9NS23 344 aa9.65□□□□□ -0.86
CHD4-202ENST00000430771 ZNF226Q9NYT6 803 aa9.65□□□□□ -0.86
CHD4-202ENST00000430771 DNAJC27Q9NZQ0 273 aa9.65□□□□□ -0.86
CHD4-202ENST00000430771 WARS2Q9UGM6 360 aaKnown RBP9.65□□□□□ -0.86
CHD4-202ENST00000430771 FBXL3Q9UKT7 428 aa9.65□□□□□ -0.86
CHD4-202ENST00000430771 COMMD3-BMI1R4GMX3 469 aa9.65□□□□□ -0.86
CHD4-202ENST00000430771 FASNP49327 2511 aaKnown RBP9.65□□□□□ -0.86
CHD4-202ENST00000430771 HELZ2Q9BYK8 2649 aaKnown RBP9.65□□□□□ -0.87
CHD4-202ENST00000430771 ALPK2Q86TB3 2170 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 A0A096LPE4 126 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 A0A1W2PPZ6 126 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 CCDC182A6NF36 153 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 OR5H1A6NKK0 313 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 C12orf71A8MTZ7 269 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 FAM171A2A8MVW0 826 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 TMCC2O75069 709 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 RAB36O95755 333 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 CST2P09228 141 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 RNF224P0DH78 156 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 GABRB1P18505 474 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 MYF6P23409 242 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 GSTT1P30711 240 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 HTR1FP30939 366 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 CDAP32320 146 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 ENTPD1P49961 510 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 PCBD1P61457 104 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 LSM6P62312 80 aaKnown RBP9.64□□□□□ -0.87
CHD4-202ENST00000430771 ADAM8P78325 824 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 SRSF1Q07955 248 aaKnown RBP eCLIP9.64□□□□□ -0.87
CHD4-202ENST00000430771 SCRN3Q0VDG4 424 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 AQP6Q13520 282 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 GGTLC2Q14390 218 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 PPA1Q15181 289 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 TSC22D1Q15714 1073 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 KCNMB1Q16558 191 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 SGCAQ16586 387 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 HIKESHIQ53FT3 197 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 LINC01590Q5TEZ4 76 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 FAM27BQ5VT28 67 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 AADACL4Q5VUY2 407 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 KRT80Q6KB66 452 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 TMEM53Q6P2H8 277 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 MEPCEQ7L2J0 689 aaKnown RBP9.64□□□□□ -0.87
CHD4-202ENST00000430771 OR51L1Q8NGJ5 315 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 RHOXF1Q8NHV9 184 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 C11orf40Q8WZ69 217 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 BCL2L2Q92843 193 aaPredicted RBP9.64□□□□□ -0.87
CHD4-202ENST00000430771 ZMYND19Q96E35 227 aaPredicted RBP9.64□□□□□ -0.87
CHD4-202ENST00000430771 ZNF582Q96NG8 517 aaPredicted RBP9.64□□□□□ -0.87
CHD4-202ENST00000430771 FOXN4Q96NZ1 517 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 CNN2Q99439 309 aaKnown RBP9.64□□□□□ -0.87
CHD4-202ENST00000430771 MED18Q9BUE0 208 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 NDRG3Q9UGV2 375 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 RELNP78509 3460 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 MYO18BQ8IUG5 2567 aa9.64□□□□□ -0.87
CHD4-202ENST00000430771 SH3D21A4FU49 640 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 TUBAL3A6NHL2 446 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 PRSS44E7EML9 344 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 GNAO1P09471 354 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 ISL1P61371 349 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 GSG1Q2KHT4 349 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 SHFQ7M4L6 423 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.63□□□□□ -0.87
CHD4-202ENST00000430771 SYT9Q86SS6 491 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 ERI1Q8IV48 349 aaKnown RBP9.63□□□□□ -0.87
CHD4-202ENST00000430771 LRRC18Q8N456 261 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 OR6N2Q8NGY6 317 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 OR2AJ1Q8NGZ0 328 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 OR52N5Q8NH56 324 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 APH1BQ8WW43 257 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 HSD17B8Q92506 261 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 PTP4A1Q93096 173 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 ZNF416Q9BWM5 594 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 CDADC1Q9BWV3 514 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 RNF121Q9H920 327 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 MARCH7Q9H992 704 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 EMC7Q9NPA0 242 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 NGBQ9NPG2 151 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 NPDC1Q9NQX5 325 aaPredicted RBP9.63□□□□□ -0.87
CHD4-202ENST00000430771 MRPL22Q9NWU5 206 aaKnown RBP9.63□□□□□ -0.87
CHD4-202ENST00000430771 HAO2Q9NYQ3 351 aa9.63□□□□□ -0.87
CHD4-202ENST00000430771 UBR5O95071 2799 aaPredicted RBP9.62□□□□□ -0.87
CHD4-202ENST00000430771 IRGMA1A4Y4 181 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 TVP23AA6NH52 213 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 PHYHO14832 338 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 ENTPD6O75354 484 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 GPANK1O95872 356 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 TFP02787 698 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 SPARCP09486 303 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 CD79AP11912 226 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 GRNP28799 593 aaKnown RBP9.62□□□□□ -0.87
CHD4-202ENST00000430771 ATP6V1E1P36543 226 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 ARR3P36575 388 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 NAA10P41227 235 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms