RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 KDM4DQ6B0I6 523 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 NRARPQ7Z6K4 114 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 BCORP1Q8N888 145 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 PHF7Q9BWX1 381 aaPredicted RBP14.11□□□□□ -0.15
PTPRF-206ENST00000429895 NMES1Q9C002 83 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 PLEKHF2Q9H8W4 249 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 FN3KRPQ9HA64 309 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 TAS2R4Q9NYW5 299 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 LOXL2Q9Y4K0 774 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 APOBEC1P41238 236 aaKnown RBP14.11□□□□□ -0.15
PTPRF-206ENST00000429895 RPS23P62266 143 aaKnown RBP14.11□□□□□ -0.15
PTPRF-206ENST00000429895 SVBPQ8N300 66 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 OR51E1Q8TCB6 317 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 PINX1Q96BK5 328 aaKnown RBP14.11□□□□□ -0.15
PTPRF-206ENST00000429895 REEP6Q96HR9 211 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 ASB16Q96NS5 453 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 PTTG3PQ9NZH4 202 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 VIRMAQ69YN4 1812 aaKnown RBP14.11□□□□□ -0.15
PTPRF-206ENST00000429895 CCDC88AQ3V6T2 1871 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 THNSL2Q86YJ6 484 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 ETFBKMTQ8IXQ9 262 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 OR6C76A6NM76 312 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 CCSO14618 274 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 SIX6O95475 246 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 MYF5P13349 255 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 OPCMLQ14982 345 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 ISYNA1Q9NPH2 558 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 A3GALT2U3KPV4 340 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 TNFSF11O14788 317 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 SRP9P49458 86 aaKnown RBP14.1□□□□□ -0.15
PTPRF-206ENST00000429895 ELAVL1Q15717 326 aaKnown RBP14.1□□□□□ -0.15
PTPRF-206ENST00000429895 B3GNT9Q6UX72 402 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 OR5H15A6NDH6 313 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 OR5H14A6NHG9 310 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 OR5H1A6NKK0 313 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 P2RX3P56373 397 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 TMEM41BQ5BJD5 291 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 KCTD11Q693B1 232 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 Q6ZSR9 355 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 CLEC2DQ9UHP7 191 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 SERTM2A0A1B0GWG4 89 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 SLC31A2O15432 143 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 TEAD1P28347 426 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 ZNF77Q15935 545 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 SOWAHCQ53LP3 525 aaPredicted RBP14.1□□□□□ -0.15
PTPRF-206ENST00000429895 DBX2Q6ZNG2 339 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 NKAIN4Q8IVV8 208 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 SLC5A6Q9Y289 635 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 C20orf202A1L168 122 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 POM121BA6NF01 834 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 IDSB3KWA1 339 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 ABLIM3O94929 683 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 MT-ATP6P00846 226 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 GLRA1P23415 457 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 FPR3P25089 353 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 PSMB3P49720 205 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 HENMT1Q5T8I9 393 aaKnown RBP14.1□□□□□ -0.15
PTPRF-206ENST00000429895 FAM109AQ8N4B1 249 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 OR51F2Q8NH61 342 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 CHST11Q9NPF2 352 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 CHRNA9Q9UGM1 479 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 DIMT1Q9UNQ2 313 aaKnown RBP14.1□□□□□ -0.15
PTPRF-206ENST00000429895 EXO1Q9UQ84 846 aaKnown RBP14.1□□□□□ -0.15
PTPRF-206ENST00000429895 ZNF701M0R085 212 aaPredicted RBP14.1□□□□□ -0.15
PTPRF-206ENST00000429895 XRCC3O43542 346 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 ELK1P19419 428 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 APEX1P27695 318 aaKnown RBP14.1□□□□□ -0.15
PTPRF-206ENST00000429895 SUB1P53999 127 aaKnown RBP eCLIP14.1□□□□□ -0.15
PTPRF-206ENST00000429895 PYCR3Q53H96 274 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 FAM74A1Q5RGS3 127 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 METRNLQ641Q3 311 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 FAM71E1Q6IPT2 247 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 DRAXINQ8NBI3 349 aaPredicted RBP14.1□□□□□ -0.15
PTPRF-206ENST00000429895 ZNF784Q8NCA9 323 aaPredicted RBP14.1□□□□□ -0.15
PTPRF-206ENST00000429895 NUDT8Q8WV74 236 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 OR11A1Q9GZK7 315 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 C20orf85Q9H1P6 137 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 FAM96BQ9Y3D0 163 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 AKAP12Q02952 1782 aa14.1□□□□□ -0.15
PTPRF-206ENST00000429895 ARPC4-TTLL3A0A0A6YYG9 625 aa14.09□□□□□ -0.15
PTPRF-206ENST00000429895 GLI4P10075 376 aa14.09□□□□□ -0.15
PTPRF-206ENST00000429895 Q6ZRG5 221 aa14.09□□□□□ -0.15
PTPRF-206ENST00000429895 SLC35E1Q96K37 410 aa14.09□□□□□ -0.15
PTPRF-206ENST00000429895 LYRM4Q9HD34 91 aa14.09□□□□□ -0.15
PTPRF-206ENST00000429895 MMP17Q9ULZ9 603 aa14.09□□□□□ -0.15
PTPRF-206ENST00000429895 FITM1A5D6W6 292 aa14.09□□□□□ -0.15
PTPRF-206ENST00000429895 TBXA2RP21731 343 aa14.09□□□□□ -0.15
PTPRF-206ENST00000429895 PCSK6P29122 969 aa14.09□□□□□ -0.15
PTPRF-206ENST00000429895 ACOXLQ9NUZ1 547 aa14.09□□□□□ -0.15
PTPRF-206ENST00000429895 C7orf72A4D263 438 aa14.09□□□□□ -0.15
PTPRF-206ENST00000429895 OR13C7P0DN81 318 aa14.09□□□□□ -0.15
PTPRF-206ENST00000429895 CTRB1P17538 263 aa14.09□□□□□ -0.15
PTPRF-206ENST00000429895 HTR4Q13639 388 aa14.09□□□□□ -0.15
PTPRF-206ENST00000429895 CTRB2Q6GPI1 263 aa14.09□□□□□ -0.15
PTPRF-206ENST00000429895 ASTLQ6HA08 431 aaPredicted RBP14.09□□□□□ -0.15
PTPRF-206ENST00000429895 USP51Q70EK9 711 aa14.09□□□□□ -0.15
PTPRF-206ENST00000429895 CISD2Q8N5K1 135 aaKnown RBP14.09□□□□□ -0.15
PTPRF-206ENST00000429895 NKAIN3Q8N8D7 197 aa14.09□□□□□ -0.15
PTPRF-206ENST00000429895 MRPL22Q9NWU5 206 aaKnown RBP14.09□□□□□ -0.15
PTPRF-206ENST00000429895 NWD2Q9ULI1 1742 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms