RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 SYT4Q9H2B2 425 aa14.4□□□□□ -0.1
VRK2-204ENST00000428021 GSX1Q9H4S2 264 aaPredicted RBP14.4□□□□□ -0.1
VRK2-204ENST00000428021 POMPQ9Y244 141 aa14.4□□□□□ -0.1
VRK2-204ENST00000428021 A0A1W2PPL8 197 aa14.39□□□□□ -0.11
VRK2-204ENST00000428021 ARPC3O15145 178 aa14.39□□□□□ -0.11
VRK2-204ENST00000428021 CCNB2O95067 398 aa14.39□□□□□ -0.11
VRK2-204ENST00000428021 GASTP01350 101 aa14.39□□□□□ -0.11
VRK2-204ENST00000428021 CST2P09228 141 aa14.39□□□□□ -0.11
VRK2-204ENST00000428021 INHBBP09529 407 aa14.39□□□□□ -0.11
VRK2-204ENST00000428021 APEX1P27695 318 aaKnown RBP14.39□□□□□ -0.11
VRK2-204ENST00000428021 GLRXP35754 106 aa14.39□□□□□ -0.11
VRK2-204ENST00000428021 PSG4Q00888 419 aa14.39□□□□□ -0.11
VRK2-204ENST00000428021 TNK1Q13470 666 aa14.39□□□□□ -0.11
VRK2-204ENST00000428021 RAB35Q15286 201 aa14.39□□□□□ -0.11
VRK2-204ENST00000428021 UGT2A3Q6UWM9 527 aa14.39□□□□□ -0.11
VRK2-204ENST00000428021 ADCK1Q86TW2 530 aa14.39□□□□□ -0.11
VRK2-204ENST00000428021 LINC00471Q8N535 108 aa14.39□□□□□ -0.11
VRK2-204ENST00000428021 ERMAPQ96PL5 475 aaPredicted RBP14.39□□□□□ -0.11
VRK2-204ENST00000428021 DOK1Q99704 481 aa14.39□□□□□ -0.11
VRK2-204ENST00000428021 SMR3AQ99954 134 aa14.39□□□□□ -0.11
VRK2-204ENST00000428021 KCNN2Q9H2S1 579 aa14.39□□□□□ -0.11
VRK2-204ENST00000428021 BARX1Q9HBU1 254 aaPredicted RBP14.39□□□□□ -0.11
VRK2-204ENST00000428021 POLE4Q9NR33 117 aa14.39□□□□□ -0.11
VRK2-204ENST00000428021 SAMHD1Q9Y3Z3 626 aaKnown RBP14.39□□□□□ -0.11
VRK2-204ENST00000428021 PMF1-BGLAPU3KQ54 211 aa14.39□□□□□ -0.11
VRK2-204ENST00000428021 U3KQV3 271 aa14.39□□□□□ -0.11
VRK2-204ENST00000428021 SETD2Q9BYW2 2564 aaPredicted RBP14.39□□□□□ -0.11
VRK2-204ENST00000428021 DHRS12A0PJE2 317 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 SSX4O60224 188 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 SLC16A7O60669 478 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 STAMBPO95630 424 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 IGFBP1P08833 259 aaPredicted RBP14.38□□□□□ -0.11
VRK2-204ENST00000428021 BMP4P12644 408 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 MSR1P21757 451 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 SNRPD2P62316 118 aaKnown RBP14.38□□□□□ -0.11
VRK2-204ENST00000428021 FLOT2Q14254 428 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 MICAQ29983 383 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 SVOPLQ8N434 492 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 AKR7LQ8NHP1 331 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 FOXN4Q96NZ1 517 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 ZNF416Q9BWM5 594 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 OR2H1Q9GZK4 316 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 NUAK2Q9H093 628 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 WNT5BQ9H1J7 359 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 C1orf198Q9H425 327 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 EGLN3Q9H6Z9 239 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 REEP1Q9H902 201 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 EMC7Q9NPA0 242 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 CCNB1IP1Q9NPC3 277 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 IL20Q9NYY1 176 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 SLC7A8Q9UHI5 535 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 CMAHPQ9Y471 501 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 SPEF1Q9Y4P9 236 aa14.38□□□□□ -0.11
VRK2-204ENST00000428021 LOC100509620A0A075B734 347 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 IQCMA0A1B0GVH7 501 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 TCRBV3S1A0A5B6 114 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 VSTM5A8MXK1 200 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 DCTN6O00399 190 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 KHDRBS3O75525 346 aaKnown RBP14.37□□□□□ -0.11
VRK2-204ENST00000428021 SNAP29O95721 258 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 PTHP01270 115 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 HIST1H1CP16403 213 aaKnown RBP14.37□□□□□ -0.11
VRK2-204ENST00000428021 GUCA1AP43080 201 aaPredicted RBP14.37□□□□□ -0.11
VRK2-204ENST00000428021 GALK2Q01415 458 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 HSF2Q03933 536 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 PLP2Q04941 152 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 DBPQ10586 325 aaPredicted RBP14.37□□□□□ -0.11
VRK2-204ENST00000428021 RASSF6Q6ZTQ3 369 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 AQP11Q8NBQ7 271 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 OR8D4Q8NGM9 314 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 MRPL24Q96A35 216 aaKnown RBP14.37□□□□□ -0.11
VRK2-204ENST00000428021 POM121L2Q96KW2 1035 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 TSSK2Q96PF2 358 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 SORCS2Q96PQ0 1159 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 SNX18Q96RF0 628 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 IFT27Q9BW83 186 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 MRPL37Q9BZE1 423 aaKnown RBP14.37□□□□□ -0.11
VRK2-204ENST00000428021 PLA2G12AQ9BZM1 189 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 CDH20Q9HBT6 801 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 COA3Q9Y2R0 106 aaPredicted RBP14.37□□□□□ -0.11
VRK2-204ENST00000428021 TIMM10BQ9Y5J6 103 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 CDH10Q9Y6N8 788 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 NF1P21359 2839 aa14.37□□□□□ -0.11
VRK2-204ENST00000428021 NIPBLQ6KC79 2804 aaeCLIP14.37□□□□□ -0.11
VRK2-204ENST00000428021 IGLV1-36A0A0B4J1U3 117 aa14.36□□□□□ -0.11
VRK2-204ENST00000428021 BHLHE40O14503 412 aa14.36□□□□□ -0.11
VRK2-204ENST00000428021 IDH3BO43837 385 aa14.36□□□□□ -0.11
VRK2-204ENST00000428021 LY6HO94772 140 aa14.36□□□□□ -0.11
VRK2-204ENST00000428021 MPZL1O95297 269 aa14.36□□□□□ -0.11
VRK2-204ENST00000428021 CST1P01037 141 aa14.36□□□□□ -0.11
VRK2-204ENST00000428021 STOMP27105 288 aa14.36□□□□□ -0.11
VRK2-204ENST00000428021 PPOXP50336 477 aa14.36□□□□□ -0.11
VRK2-204ENST00000428021 EFNA4P52798 201 aa14.36□□□□□ -0.11
VRK2-204ENST00000428021 NUDT6P53370 316 aa14.36□□□□□ -0.11
VRK2-204ENST00000428021 TBC1D28Q2M2D7 210 aa14.36□□□□□ -0.11
VRK2-204ENST00000428021 OTPQ5XKR4 325 aa14.36□□□□□ -0.11
VRK2-204ENST00000428021 TMEM179BQ7Z7N9 219 aa14.36□□□□□ -0.11
VRK2-204ENST00000428021 SYT9Q86SS6 491 aa14.36□□□□□ -0.11
VRK2-204ENST00000428021 BIVMQ86UB2 503 aa14.36□□□□□ -0.11
VRK2-204ENST00000428021 LRP11Q86VZ4 500 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms