RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 SULT1C4O75897 302 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 RGS9O75916 674 aaPredicted RBP5.29□□□□□ -1.56
HMGB3-202ENST00000419110 KRT33AO76009 404 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 AQP8O94778 261 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 SERPINA3P01011 423 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 OR8G3PP0DMU2 310 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF19P17023 458 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 CD53P19397 219 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 MSR1P21757 451 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 MYL9P24844 172 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 EDNRAP25101 427 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 LAP3P28838 519 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 CD79BP40259 229 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 SELENOPP49908 381 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 GDI2P50395 445 aaKnown RBP5.29□□□□□ -1.56
HMGB3-202ENST00000419110 RIDAP52758 137 aaKnown RBP5.29□□□□□ -1.56
HMGB3-202ENST00000419110 SUCLG1P53597 346 aaKnown RBP5.29□□□□□ -1.56
HMGB3-202ENST00000419110 RUNX1T1Q06455 604 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 NFATC3Q12968 1075 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 EIF2B1Q14232 305 aaKnown RBP5.29□□□□□ -1.56
HMGB3-202ENST00000419110 CDK5R1Q15078 307 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 SF3B4Q15427 424 aaKnown RBP eCLIP5.29□□□□□ -1.56
HMGB3-202ENST00000419110 SSX1Q16384 188 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 TBR1Q16650 682 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF829Q3KNS6 432 aaPredicted RBP5.29□□□□□ -1.56
HMGB3-202ENST00000419110 RIPPLY2Q5TAB7 128 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 ARL9Q6T311 187 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 GDPGP1Q6ZNW5 385 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 CREB3L2Q70SY1 520 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 DPY19L4Q7Z388 723 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 ABHD12BQ7Z5M8 362 aaPredicted RBP5.29□□□□□ -1.56
HMGB3-202ENST00000419110 KRT77Q7Z794 578 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 OR2AJ1Q8NGZ0 328 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 OTOSQ8NHW6 89 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 FNDC9Q8TBE3 224 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 ABHD3Q8WU67 409 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 GATAD2BQ8WXI9 593 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 ROBO4Q8WZ75 1007 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 TMEM54Q969K7 222 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 APH1AQ96BI3 265 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 SMIM19Q96E16 107 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 TXNDC15Q96J42 360 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 FOXN4Q96NZ1 517 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF385AQ96PM9 386 aaKnown RBP5.29□□□□□ -1.56
HMGB3-202ENST00000419110 CHCHD6Q9BRQ6 235 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 MRPL13Q9BYD1 178 aaKnown RBP5.29□□□□□ -1.56
HMGB3-202ENST00000419110 PRDM14Q9GZV8 571 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 NAA50Q9GZZ1 169 aaKnown RBP5.29□□□□□ -1.56
HMGB3-202ENST00000419110 COMMD4Q9H0A8 199 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 DEFB127Q9H1M4 99 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 SLCO5A1Q9H2Y9 848 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 NELFAQ9H3P2 528 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 MOB1AQ9H8S9 216 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 RNF122Q9H9V4 155 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 BCO1Q9HAY6 547 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 GP6Q9HCN6 339 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 MRPL22Q9NWU5 206 aaKnown RBP5.29□□□□□ -1.56
HMGB3-202ENST00000419110 CCDC59Q9P031 241 aaKnown RBP5.29□□□□□ -1.56
HMGB3-202ENST00000419110 TUBD1Q9UJT1 453 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 ZMIZ1Q9ULJ6 1067 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 SSR3Q9UNL2 185 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 COPS3Q9UNS2 423 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 TP53TG5Q9Y2B4 290 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 COA3Q9Y2R0 106 aaPredicted RBP5.29□□□□□ -1.56
HMGB3-202ENST00000419110 NOSIPQ9Y314 301 aaKnown RBP5.29□□□□□ -1.56
HMGB3-202ENST00000419110 ZGRF1Q86YA3 2104 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 NCOR2Q9Y618 2525 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 A0A1B0GVC2 190 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 A0A1W2PPW3 197 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 METTL15A6NJ78 407 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF724A8MTY0 619 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 MRPL33O75394 65 aaKnown RBP5.28□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF432O94892 652 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 FARS2O95363 451 aaKnown RBP5.28□□□□□ -1.56
HMGB3-202ENST00000419110 HLA-DPB1P04440 258 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 QDPRP09417 244 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 CPN1P15169 458 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 CELP19835 753 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 MAPK3P27361 379 aaPredicted RBP5.28□□□□□ -1.56
HMGB3-202ENST00000419110 HSD11B1P28845 292 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 AGTR1P30556 359 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 PTGS2P35354 604 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 PTGER4P35408 488 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 SOX6P35712 828 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 TGM4P49221 684 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF133P52736 654 aaPredicted RBP5.28□□□□□ -1.56
HMGB3-202ENST00000419110 OR12D2P58182 307 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 PSMA6P60900 246 aaKnown RBP5.28□□□□□ -1.56
HMGB3-202ENST00000419110 NCS1P62166 190 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 LSM3P62310 102 aaKnown RBP5.28□□□□□ -1.56
HMGB3-202ENST00000419110 RPS25P62851 125 aaKnown RBP5.28□□□□□ -1.56
HMGB3-202ENST00000419110 SCRN3Q0VDG4 424 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 AQP6Q13520 282 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 GPR50Q13585 617 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 TPBGQ13641 420 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 STK11Q15831 433 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 CTF1Q16619 201 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 MEP1BQ16820 701 aa5.28□□□□□ -1.56
HMGB3-202ENST00000419110 EIF2S3LQ2VIR3 472 aaKnown RBP5.28□□□□□ -1.56
HMGB3-202ENST00000419110 CCDC58Q4VC31 144 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms