RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 CRLF1O75462 422 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 NDUFB2O95178 105 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 GADD45GO95257 159 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 MPZL1O95297 269 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 GPANK1O95872 356 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 FABP3P05413 133 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 CD14P08571 375 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 CSF3P09919 207 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 IGHV4-31P0DP07 118 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 HSD17B1P14061 328 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 COL8A2P25067 703 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 STOMP27105 288 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 RAD52P43351 418 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 LIMS1P48059 325 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 CENPAP49450 140 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 NKPD1Q17RQ9 610 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 ANKDD1AQ495B1 522 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 MESTQ5EB52 335 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 SPATA46Q5T0L3 261 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 FAM27BQ5VT28 67 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 CYB5R2Q6BCY4 276 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 ZNF774Q6NX45 483 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 RINLQ6ZS11 566 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 DPPA2Q7Z7J5 298 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 ZER1Q7Z7L7 766 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 OR1J1Q8NGS3 322 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 SYNPRQ8TBG9 265 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 UBASH3BQ8TF42 649 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 NEU4Q8WWR8 484 aaPredicted RBP8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 WNT5BQ9H1J7 359 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 ANKRD19PQ9H560 264 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 SMURF2Q9HAU4 748 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 SIGLEC7Q9Y286 467 aa8.74□□□□□ -1.01
NCKIPSD-202ENST00000413374 C2CD3Q4AC94 2353 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 NF1P21359 2839 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 LOC100509620A0A075B734 347 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 PRSS37A4D1T9 235 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 A8MV72 311 aaPredicted RBP8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 M0R233 179 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 DYNC1I1O14576 645 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 OR10H3O60404 316 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 SLC16A7O60669 478 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 PPP1R3DO95685 299 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 HPXP02790 462 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 SEMG1P04279 462 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 CST2P09228 141 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 NR2C1P13056 603 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 APEHP13798 732 aaKnown RBP8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 ZNF16P17020 682 aaPredicted RBP8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 ITGA2P17301 1181 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 RRM2P31350 389 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 WNT5AP41221 380 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 MAGEB1P43366 347 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 EVX1P49640 407 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 GDI2P50395 445 aaKnown RBP8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 FXYD6P3P58550 94 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 RPS23P62266 143 aaKnown RBP8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 PPP1R8Q12972 351 aaKnown RBP8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 ENDOGQ14249 297 aaKnown RBP8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 TRIP10Q15642 601 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 NRN1LQ496H8 165 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 C6orf52Q5T4I8 152 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 FAM205BPQ63HN1 556 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 FAM122BQ7Z309 247 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 ZDHHC21Q8IVQ6 265 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 CCDC197Q8NCU1 140 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 C11orf40Q8WZ69 217 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 GTF3AQ92664 365 aaKnown RBP8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 POM121L2Q96KW2 1035 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 TSSK2Q96PF2 358 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 ERMAPQ96PL5 475 aaPredicted RBP8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 ZNF416Q9BWM5 594 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 OR2H1Q9GZK4 316 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 MS4A5Q9H3V2 200 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 C1orf198Q9H425 327 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 SRA1Q9HD15 236 aaKnown RBP8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 NRIP3Q9NQ35 241 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 POLE4Q9NR33 117 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 EIF3KQ9UBQ5 218 aaKnown RBP8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 TMCC3Q9ULS5 477 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 COA3Q9Y2R0 106 aaPredicted RBP8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 TIMM10BQ9Y5J6 103 aa8.73□□□□□ -1.01
NCKIPSD-202ENST00000413374 LOC100289279A0A1B0GTE1 492 aa8.72□□□□□ -1.01
NCKIPSD-202ENST00000413374 C12orf71A8MTZ7 269 aa8.72□□□□□ -1.01
NCKIPSD-202ENST00000413374 NDUFS8O00217 210 aa8.72□□□□□ -1.01
NCKIPSD-202ENST00000413374 TLX2O43763 284 aaPredicted RBP8.72□□□□□ -1.01
NCKIPSD-202ENST00000413374 CDC14BO60729 498 aa8.72□□□□□ -1.01
NCKIPSD-202ENST00000413374 FAM107AO95990 144 aa8.72□□□□□ -1.01
NCKIPSD-202ENST00000413374 NGFP01138 241 aa8.72□□□□□ -1.01
NCKIPSD-202ENST00000413374 CTLA4P16410 223 aa8.72□□□□□ -1.01
NCKIPSD-202ENST00000413374 ATP6V1B2P21281 511 aa8.72□□□□□ -1.01
NCKIPSD-202ENST00000413374 MSR1P21757 451 aa8.72□□□□□ -1.01
NCKIPSD-202ENST00000413374 MPV17P39210 176 aa8.72□□□□□ -1.01
NCKIPSD-202ENST00000413374 CDKN2AP42771 156 aaKnown RBP8.72□□□□□ -1.01
NCKIPSD-202ENST00000413374 KLF3P57682 345 aaPredicted RBP8.72□□□□□ -1.01
NCKIPSD-202ENST00000413374 SMIM11AP58511 58 aa8.72□□□□□ -1.01
NCKIPSD-202ENST00000413374 SELENOVP59797 346 aa8.72□□□□□ -1.01
NCKIPSD-202ENST00000413374 KRR1Q13601 381 aaKnown RBP8.72□□□□□ -1.01
NCKIPSD-202ENST00000413374 TSTQ16762 297 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms