RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 PRKXP51817 358 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 CRMP1Q14194 572 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 SLC36A2Q495M3 483 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 ARSJQ5FYB0 599 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-211ENST00000413186 VASNQ6EMK4 673 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 OR2A2Q6IF42 318 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 C9orf40Q8IXQ3 194 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 FLVCR1-AS1Q8TAF5 88 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 TTTY10Q9BZA0 68 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 B3GNT4Q9C0J1 378 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 OR11A1Q9GZK7 315 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 RGCCQ9H4X1 137 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 EXO1Q9UQ84 846 aaKnown RBP7.73□□□□□ -1.17
SYNE1-211ENST00000413186 NTNG1Q9Y2I2 539 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 GBF1Q92538 1859 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 IGHV1-45A0A0A0MS14 117 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 FAM171A2A8MVW0 826 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 CSTBP04080 98 aaKnown RBP7.72□□□□□ -1.17
SYNE1-211ENST00000413186 OR2T7P0C7T2 308 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 BMXP51813 675 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF322Q6U7Q0 402 aaPredicted RBP7.72□□□□□ -1.17
SYNE1-211ENST00000413186 METAP1DQ6UB28 335 aaPredicted RBP7.72□□□□□ -1.17
SYNE1-211ENST00000413186 JAGN1Q8N5M9 183 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 ARIH2OSQ8N7S6 290 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 GPR32P1Q8NGA4 272 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 OR56B2PQ8NGI1 322 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 OR5L1Q8NGL2 311 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 OR1J2Q8NGS2 313 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 OR2T27Q8NH04 317 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 INTS12Q96CB8 462 aaKnown RBP7.72□□□□□ -1.17
SYNE1-211ENST00000413186 KCTD12Q96CX2 325 aaKnown RBP7.72□□□□□ -1.17
SYNE1-211ENST00000413186 AASSQ9UDR5 926 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 A4GNTQ9UNA3 340 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 PRAMEF27A3QJZ7 478 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 K7ERU9 68 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 CRXO43186 299 aaPredicted RBP7.72□□□□□ -1.17
SYNE1-211ENST00000413186 PRSS23O95084 383 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 SCG5P05408 212 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 YES1P07947 543 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 FBXO45P0C2W1 286 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 CLDN15P56746 228 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 RAC1P63000 192 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 C22orf42Q6IC83 251 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 TMEM205Q6UW68 189 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 LINGO2Q7L985 606 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 SLC46A3Q7Z3Q1 461 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 CEACAM19Q7Z692 300 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 TPRA1Q86W33 373 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 OR5M1Q8NGP8 315 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 Q96M85 177 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 C1orf198Q9H425 327 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 CKAP5Q14008 2032 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 ASXL3Q9C0F0 2248 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.72□□□□□ -1.17
SYNE1-211ENST00000413186 A0A1W2PNR3 127 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 MEGF11A6BM72 1044 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 HYAL3O43820 417 aaPredicted RBP7.72□□□□□ -1.17
SYNE1-211ENST00000413186 SCGB1D1O95968 90 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 LCATP04180 440 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 S100A4P26447 101 aaKnown RBP7.72□□□□□ -1.17
SYNE1-211ENST00000413186 SDHAP31040 664 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 CLDN6P56747 220 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 SIRPAP78324 504 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 CEBPEQ15744 281 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF791Q3KP31 576 aaPredicted RBP7.72□□□□□ -1.17
SYNE1-211ENST00000413186 TMEM244Q5VVB8 128 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 TMPRSS9Q7Z410 1059 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 ACBD4Q8NC06 268 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 CSNK2A3Q8NEV1 391 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 ZFP3Q96NJ6 502 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 SCGB3A2Q96PL1 93 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 LMF1Q96S06 567 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 MBOAT4Q96T53 435 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 NMNAT3Q96T66 252 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF251Q9BRH9 671 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 ISYNA1Q9NPH2 558 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 FBXO34Q9NWN3 711 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 NTMQ9P121 344 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 KIF25Q9UIL4 384 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 C4orf51C9J302 202 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 HRKO00198 91 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 GPRIN2O60269 458 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 UPK1BO75841 260 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 QDPRP09417 244 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 PSKH1P11801 424 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 IFNGR1P15260 489 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 HTR1FP30939 366 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 CASP3P42574 277 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 DUSP2Q05923 314 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 B3GNTL1Q67FW5 361 aaPredicted RBP7.72□□□□□ -1.17
SYNE1-211ENST00000413186 TMPRSS11FQ6ZWK6 438 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 FAM26EQ8N5C1 309 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 CHST4Q8NCG5 386 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 PHYHIPQ92561 330 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 ZG16BQ96DA0 208 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 SYT4Q9H2B2 425 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 TXNIPQ9H3M7 391 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 SLC25A19Q9HC21 320 aa7.72□□□□□ -1.17
SYNE1-211ENST00000413186 CMC2Q9NRP2 79 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms