RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 H3BN98 237 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 BHLHE40O14503 412 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 SLC16A7O60669 478 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 TIPRLO75663 272 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 SOX14O95416 240 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 IFNGP01579 166 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 SOD3P08294 240 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 DANCRP0C864 163 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 PATE4P0C8F1 98 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 HIST1H1CP16403 213 aaKnown RBP9.46□□□□□ -0.9
CHMP3-205ENST00000409810 LAP3P28838 519 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 CALCRP30988 508 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 APLNRP35414 380 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 CDKN2AP42771 156 aaKnown RBP9.46□□□□□ -0.9
CHMP3-205ENST00000409810 RPS23P62266 143 aaKnown RBP9.46□□□□□ -0.9
CHMP3-205ENST00000409810 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.46□□□□□ -0.9
CHMP3-205ENST00000409810 SCRN3Q0VDG4 424 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 RAB39AQ14964 217 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 ATP6AP1Q15904 470 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 PGGHGQ32M88 737 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 B3GLCTQ6Y288 498 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 SYT9Q86SS6 491 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 MYPOPQ86VE0 399 aaPredicted RBP9.46□□□□□ -0.9
CHMP3-205ENST00000409810 GLB1L2Q8IW92 636 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 ALDH16A1Q8IZ83 802 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 LNX2Q8N448 690 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 SLC30A7Q8NEW0 376 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 SDR9C7Q8NEX9 313 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 OR52E2Q8NGJ4 325 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 OR5K1Q8NHB7 308 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 HTRA1Q92743 480 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 DUS3LQ96G46 650 aaKnown RBP9.46□□□□□ -0.9
CHMP3-205ENST00000409810 NMNAT3Q96T66 252 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 FEVQ99581 238 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 NIPSNAP1Q9BPW8 284 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 TRAF4Q9BUZ4 470 aaPredicted RBP9.46□□□□□ -0.9
CHMP3-205ENST00000409810 TSSK6Q9BXA6 273 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 PLA2G12AQ9BZM1 189 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 GSX2Q9BZM3 304 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 RACGAP1Q9H0H5 632 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 RERGLQ9H628 205 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 ZNF442Q9H7R0 627 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 CDH20Q9HBT6 801 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 POLE4Q9NR33 117 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 CA10Q9NS85 328 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 KLHL21Q9UJP4 597 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 FBXO9Q9UK97 447 aaPredicted RBP9.46□□□□□ -0.9
CHMP3-205ENST00000409810 POLR1DQ9Y2S0 133 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 AP4S1Q9Y587 144 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 FKBP7Q9Y680 259 aa9.46□□□□□ -0.9
CHMP3-205ENST00000409810 MMP7P09237 267 aaPredicted RBP9.45□□□□□ -0.9
CHMP3-205ENST00000409810 PAX1P15863 534 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 ZNF3P17036 446 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 ZNF32P17041 273 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 PTH2RP49190 550 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 CENPAP49450 140 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 LSM6P62312 80 aaKnown RBP9.45□□□□□ -0.9
CHMP3-205ENST00000409810 GLO1Q04760 184 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 SNTB2Q13425 540 aaKnown RBP9.45□□□□□ -0.9
CHMP3-205ENST00000409810 CCNIQ14094 377 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 DAG1Q14118 895 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 ETFDHQ16134 617 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 SLC36A3Q495N2 470 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 SLC35F1Q5T1Q4 408 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 SHEQ5VZ18 495 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 VHLLQ6RSH7 139 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 UNQ6126/PRO20091Q6UXV3 157 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 SPNS3Q6ZMD2 512 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 TMEM179BQ7Z7N9 219 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 HIPK1Q86Z02 1210 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 ATG16L2Q8NAA4 619 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 FGFBP3Q8TAT2 258 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 IGFBPL1Q8WX77 278 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 UTP4Q969X6 686 aaKnown RBP9.45□□□□□ -0.9
CHMP3-205ENST00000409810 PERPQ96FX8 193 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 MS4A3Q96HJ5 214 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 ZNF75AQ96N20 296 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 TEX12Q9BXU0 123 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 NUAK2Q9H093 628 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 RPRD1BQ9NQG5 326 aaKnown RBP9.45□□□□□ -0.9
CHMP3-205ENST00000409810 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.45□□□□□ -0.9
CHMP3-205ENST00000409810 COA3Q9Y2R0 106 aaPredicted RBP9.45□□□□□ -0.9
CHMP3-205ENST00000409810 TIMM10BQ9Y5J6 103 aa9.45□□□□□ -0.9
CHMP3-205ENST00000409810 MED13LQ71F56 2210 aa9.44□□□□□ -0.9
CHMP3-205ENST00000409810 OTOGQ6ZRI0 2925 aa9.44□□□□□ -0.9
CHMP3-205ENST00000409810 RIIAD1A6NNX1 92 aa9.44□□□□□ -0.9
CHMP3-205ENST00000409810 B9A039 149 aa9.44□□□□□ -0.9
CHMP3-205ENST00000409810 OVOL3O00110 214 aa9.44□□□□□ -0.9
CHMP3-205ENST00000409810 SNAP29O95721 258 aa9.44□□□□□ -0.9
CHMP3-205ENST00000409810 ZNF35P13682 527 aa9.44□□□□□ -0.9
CHMP3-205ENST00000409810 OSMP13725 252 aa9.44□□□□□ -0.9
CHMP3-205ENST00000409810 ZNF23P17027 643 aa9.44□□□□□ -0.9
CHMP3-205ENST00000409810 NR4A1P22736 598 aa9.44□□□□□ -0.9
CHMP3-205ENST00000409810 GLRXP35754 106 aa9.44□□□□□ -0.9
CHMP3-205ENST00000409810 SERPINF1P36955 418 aa9.44□□□□□ -0.9
CHMP3-205ENST00000409810 ATP5J2P56134 94 aa9.44□□□□□ -0.9
CHMP3-205ENST00000409810 ACTR3P61158 418 aa9.44□□□□□ -0.9
CHMP3-205ENST00000409810 SNRPD2P62316 118 aaKnown RBP9.44□□□□□ -0.9
CHMP3-205ENST00000409810 NKX6-1P78426 367 aaPredicted RBP9.44□□□□□ -0.9
CHMP3-205ENST00000409810 AQP6Q13520 282 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms