RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 NUFIP2Q7Z417 695 aaKnown RBP18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 ZNF100Q8IYN0 542 aa18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 SYS1Q8N2H4 156 aa18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 ZNF454Q8N9F8 522 aa18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 YIPF6Q96EC8 236 aa18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 FUNDC2Q9BWH2 189 aa18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 LINC00470Q9BZP3 86 aa18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 ISYNA1Q9NPH2 558 aa18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 POLE4Q9NR33 117 aa18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 ASF1BQ9NVP2 202 aa18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 GNG8Q9UK08 70 aa18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 CHD8Q9HCK8 2581 aa18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 MAGEB4O15481 346 aaPredicted RBP18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 WDR1O75083 606 aa18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 SS18L1O75177 396 aaPredicted RBP18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 IGHV3-9P01782 118 aa18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 CAPZA2P47755 286 aa18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 RGS6P49758 472 aa18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 ACSM1Q08AH1 577 aa18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 SGCAQ16586 387 aa18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 PRR30Q53SZ7 412 aaPredicted RBP18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 NSUN5P2Q63ZY6 315 aa18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 PLEKHG7Q6ZR37 379 aa18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 CD163Q86VB7 1156 aa18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 FAM57AQ8TBR7 257 aa18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 CPT1CQ8TCG5 803 aa18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 HTRA1Q92743 480 aa18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 SLX1AQ9BQ83 275 aa18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 NELFAQ9H3P2 528 aa18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 GPR35Q9HC97 309 aa18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 EMC7Q9NPA0 242 aa18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 BABAM2Q9NXR7 383 aa18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 POLR1DQ9Y2S0 133 aa18.02■□□□□ 0.48
VCPKMT-202ENST00000395860 SVILO95425 2214 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 BOD1L1Q8NFC6 3051 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 FIGNL2A6NMB9 653 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 PSMD9O00233 223 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 CCRL2O00421 344 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 LALBAP00709 142 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 EDNRAP25101 427 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 TGFBR2P37173 567 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 EGR3Q06889 387 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 KCNMB1Q16558 191 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 PCK2Q16822 640 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 FOXL2NBQ6ZUU3 175 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 VASH1Q7L8A9 365 aaPredicted RBP18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 LINGO2Q7L985 606 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 LINC00346Q8IVM7 164 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 ASB17Q8WXJ9 295 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 DGCR14Q96DF8 476 aaKnown RBP18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 ZNF837Q96EG3 531 aaPredicted RBP18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 DOCK7Q96N67 2140 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 TM9SF2Q99805 663 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 TTYH2Q9BSA4 534 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 C12orf49Q9H741 205 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 TRIM36Q9NQ86 728 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 SLC7A10Q9NS82 523 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 UPB1Q9UBR1 384 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 IKZF2Q9UKS7 526 aa18.02■□□□□ 0.47
VCPKMT-202ENST00000395860 CD8B2A6NJW9 211 aa18.01■□□□□ 0.47
VCPKMT-202ENST00000395860 NOL3O60936 208 aaKnown RBP18.01■□□□□ 0.47
VCPKMT-202ENST00000395860 MSR1P21757 451 aa18.01■□□□□ 0.47
VCPKMT-202ENST00000395860 PTGER4P35408 488 aa18.01■□□□□ 0.47
VCPKMT-202ENST00000395860 ROR2Q01974 943 aaKnown RBP18.01■□□□□ 0.47
VCPKMT-202ENST00000395860 CEACAM16Q2WEN9 425 aa18.01■□□□□ 0.47
VCPKMT-202ENST00000395860 OR2A2Q6IF42 318 aa18.01■□□□□ 0.47
VCPKMT-202ENST00000395860 GFRALQ6UXV0 394 aa18.01■□□□□ 0.47
VCPKMT-202ENST00000395860 FAM220AQ7Z4H9 259 aa18.01■□□□□ 0.47
VCPKMT-202ENST00000395860 GCNT2Q8N0V5 402 aa18.01■□□□□ 0.47
VCPKMT-202ENST00000395860 C9orf106Q8NAJ2 232 aa18.01■□□□□ 0.47
VCPKMT-202ENST00000395860 UFD1Q92890 307 aa18.01■□□□□ 0.47
VCPKMT-202ENST00000395860 AMELYQ99218 206 aa18.01■□□□□ 0.47
VCPKMT-202ENST00000395860 NAA50Q9GZZ1 169 aaKnown RBP18.01■□□□□ 0.47
VCPKMT-202ENST00000395860 RSL24D1Q9UHA3 163 aaKnown RBP18.01■□□□□ 0.47
VCPKMT-202ENST00000395860 PNMA8CA0A1B0GUJ8 204 aa18■□□□□ 0.47
VCPKMT-202ENST00000395860 PRR32B1ATL7 298 aa18■□□□□ 0.47
VCPKMT-202ENST00000395860 KRT8P05787 483 aa18■□□□□ 0.47
VCPKMT-202ENST00000395860 CPEP16870 476 aa18■□□□□ 0.47
VCPKMT-202ENST00000395860 BDH1Q02338 343 aa18■□□□□ 0.47
VCPKMT-202ENST00000395860 LIPKQ5VXJ0 399 aa18■□□□□ 0.47
VCPKMT-202ENST00000395860 KCTD18Q6PI47 426 aaPredicted RBP18■□□□□ 0.47
VCPKMT-202ENST00000395860 DCXRQ7Z4W1 244 aa18■□□□□ 0.47
VCPKMT-202ENST00000395860 KCTD20Q7Z5Y7 419 aa18■□□□□ 0.47
VCPKMT-202ENST00000395860 P2RY8Q86VZ1 359 aa18■□□□□ 0.47
VCPKMT-202ENST00000395860 ANKRD13BQ86YJ7 626 aa18■□□□□ 0.47
VCPKMT-202ENST00000395860 UBE2J2Q8N2K1 259 aa18■□□□□ 0.47
VCPKMT-202ENST00000395860 ZFP41Q8N8Y5 198 aa18■□□□□ 0.47
VCPKMT-202ENST00000395860 OR2AJ1Q8NGZ0 328 aa18■□□□□ 0.47
VCPKMT-202ENST00000395860 ZNF420Q8TAQ5 688 aaPredicted RBP18■□□□□ 0.47
VCPKMT-202ENST00000395860 ABHD6Q9BV23 337 aa18■□□□□ 0.47
VCPKMT-202ENST00000395860 CYB5R1Q9UHQ9 305 aa18■□□□□ 0.47
VCPKMT-202ENST00000395860 EMC9Q9Y3B6 208 aa18■□□□□ 0.47
VCPKMT-202ENST00000395860 ZNF587BE7ETH6 402 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 TACSTD2P09758 323 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 OR8G3PP0DMU2 310 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 GTF2A1P52655 376 aaPredicted RBP17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 GBX2P52951 348 aaPredicted RBP17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 LSM6P62312 80 aaKnown RBP17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 MRPS34P82930 218 aaKnown RBP17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 SSX1Q16384 188 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms