RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 SLC16A9Q7RTY1 509 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 ZPLD1Q8TCW7 415 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 RNF170Q96K19 258 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 OR6C1Q96RD1 312 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 ZNF587Q96SQ5 575 aaPredicted RBP9.57□□□□□ -0.88
CALD1-203ENST00000393118 EMC6Q9BV81 110 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 CAMK2AQ9UQM7 478 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 NOP16Q9Y3C1 178 aaKnown RBP9.57□□□□□ -0.88
CALD1-203ENST00000393118 SLCO1B1Q9Y6L6 691 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 RANBP2P49792 3224 aaKnown RBP9.57□□□□□ -0.88
CALD1-203ENST00000393118 TRAV36DV7A0A075B6V5 113 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 TLX3O43711 291 aaPredicted RBP9.56□□□□□ -0.88
CALD1-203ENST00000393118 LANCL1O43813 399 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 ZNF432O94892 652 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 CFDP00746 253 aaPredicted RBP9.56□□□□□ -0.88
CALD1-203ENST00000393118 KLK3P07288 261 aaPredicted RBP9.56□□□□□ -0.88
CALD1-203ENST00000393118 S100A11P31949 105 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 ACAA2P42765 397 aaKnown RBP9.56□□□□□ -0.88
CALD1-203ENST00000393118 CXCL12P48061 93 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 RAB13P51153 203 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 CCINQ13939 588 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 LANCL3Q6ZV70 420 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 ARMC10Q8N2F6 343 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 SYS1Q8N2H4 156 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 INO80EQ8NBZ0 244 aaPredicted RBP9.56□□□□□ -0.88
CALD1-203ENST00000393118 GPR119Q8TDV5 335 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 OR5B2Q96R09 309 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 NUDT9Q9BW91 350 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 EVA1AQ9H8M9 152 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 KLK11Q9UBX7 282 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 MOKQ9UQ07 419 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 PLXNA4Q9HCM2 1894 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 NCOR1O75376 2440 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 C4orf47A7E2U8 309 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 SMIM10L1P0DMW3 83 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 RASGEF1BQ0VAM2 473 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 ZNF74Q16587 644 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 LPAL2Q16609 132 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 PRAMEF20Q5VT98 475 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 FOXRED2Q8IWF2 684 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 PXT1Q8NFP0 134 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 OR14A16Q8NHC5 309 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 HSD17B8Q92506 261 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 SMIM10Q96HG1 83 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 CTSFQ9UBX1 484 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 SLC22A13Q9Y226 551 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 MMACHCQ9Y4U1 282 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 TMEM269A0A1B0GVZ9 245 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 IFITM5A6NNB3 132 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 NGFRP08138 427 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 NME1P15531 152 aaKnown RBP9.56□□□□□ -0.88
CALD1-203ENST00000393118 PSMB1P20618 241 aaKnown RBP9.56□□□□□ -0.88
CALD1-203ENST00000393118 S100PP25815 95 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 CHAF1BQ13112 559 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 Q3ZCU0 254 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 SLC35D3Q5M8T2 416 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 PAPD4Q6PIY7 484 aaKnown RBP9.56□□□□□ -0.88
CALD1-203ENST00000393118 ZNF283Q8N7M2 679 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 OR56B4Q8NH76 319 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 SCARB1Q8WTV0 552 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 DVL3Q92997 716 aaPredicted RBP9.56□□□□□ -0.88
CALD1-203ENST00000393118 C8orf44Q96CB5 159 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 OR1F2PQ96R84 312 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 SEMA4CQ9C0C4 833 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 PTGES2Q9H7Z7 377 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 MMP25Q9NPA2 562 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 C2orf42Q9NWW7 574 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 UPB1Q9UBR1 384 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 SUSD2Q9UGT4 822 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 ZNF223Q9UK11 482 aaPredicted RBP9.56□□□□□ -0.88
CALD1-203ENST00000393118 EMC9Q9Y3B6 208 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 RNF215Q9Y6U7 377 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 FAM74A7A6NL05 159 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 METTL12A8MUP2 240 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 PTP4A3O75365 173 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 AMY2AP04746 511 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 SRFP11831 508 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 KCNJ3P48549 501 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 AFF3P51826 1226 aaKnown RBP9.56□□□□□ -0.88
CALD1-203ENST00000393118 RBM39Q14498 530 aaKnown RBP9.56□□□□□ -0.88
CALD1-203ENST00000393118 TOMM34Q15785 309 aaPredicted RBP9.56□□□□□ -0.88
CALD1-203ENST00000393118 ETFDHQ16134 617 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.56□□□□□ -0.886e-7■■■□□ 18.3
CALD1-203ENST00000393118 FAM74A3Q4VXF1 159 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 SFRP5Q5T4F7 317 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 FAM69AQ5T7M9 428 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 EEF1A1P5Q5VTE0 462 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 C1orf140Q5VVS0 124 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 C19orf48Q6RUI8 117 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 SYT13Q7L8C5 426 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 DPPA2Q7Z7J5 298 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 OR5M1Q8NGP8 315 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 SCARF2Q96GP6 870 aaPredicted RBP9.56□□□□□ -0.88
CALD1-203ENST00000393118 GHITMQ9H3K2 345 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 MIOXQ9UGB7 285 aa9.56□□□□□ -0.88
CALD1-203ENST00000393118 COA3Q9Y2R0 106 aaPredicted RBP9.56□□□□□ -0.88
CALD1-203ENST00000393118 LMO7DNF2Z398 122 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 H0YIG0 161 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 PHYHO14832 338 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 CRABP1P29762 137 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms