RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 PACRGQ96M98 296 aaPredicted RBP11.9□□□□□ -0.5
NCSTN-202ENST00000368063 PRSS27Q9BQR3 290 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 TMEM208Q9BTX3 173 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 C20orf141Q9NUB4 165 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 COL4A3Q01955 1670 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 C9J4A7 227 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 M0QZ92 97 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 APBB3O95704 486 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 TBX6O95947 436 aaPredicted RBP11.9□□□□□ -0.5
NCSTN-202ENST00000368063 CATP04040 527 aaKnown RBP11.9□□□□□ -0.5
NCSTN-202ENST00000368063 LYL1P12980 280 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 HTR2CP28335 458 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 NAA10P41227 235 aaPredicted RBP11.9□□□□□ -0.5
NCSTN-202ENST00000368063 MRPS11P82912 194 aaKnown RBP11.9□□□□□ -0.5
NCSTN-202ENST00000368063 GAGE1Q13065 139 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 MLC1Q15049 377 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 PRAMEF8Q5VWM4 474 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 PRAMEF7Q5VXH5 474 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 GDPD4Q6W3E5 623 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 ZNF227Q86WZ6 799 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 SLC35F2Q8IXU6 374 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 PFN4Q8NHR9 129 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 ZNF480Q8WV37 535 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 AQP10Q96PS8 301 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 NMES1Q9C002 83 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 SLC5A7Q9GZV3 580 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 GLIPR2Q9H4G4 154 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 ATG4BQ9Y4P1 393 aa11.9□□□□□ -0.5
NCSTN-202ENST00000368063 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.89□□□□□ -0.51
NCSTN-202ENST00000368063 LINC00614P0C842 121 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 F3P13726 295 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 SNCAP37840 140 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 ZNF674Q2M3X9 581 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 WDR88Q6ZMY6 472 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 HPSE2Q8WWQ2 592 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 SEH1LQ96EE3 360 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 CNN2Q99439 309 aaKnown RBP11.89□□□□□ -0.51
NCSTN-202ENST00000368063 SLC2A4RGQ9NR83 387 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 AMDHD2Q9Y303 409 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 MRPS18CQ9Y3D5 142 aaKnown RBP11.89□□□□□ -0.51
NCSTN-202ENST00000368063 DYRK1BQ9Y463 629 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 VNN2O95498 520 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 MSX1P28360 303 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 CLN3Q13286 438 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 LASP1Q14847 261 aaKnown RBP11.89□□□□□ -0.51
NCSTN-202ENST00000368063 EIF5AL1Q6IS14 154 aaKnown RBP11.89□□□□□ -0.51
NCSTN-202ENST00000368063 CD163Q86VB7 1156 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 LILRA3Q8N6C8 439 aaPredicted RBP11.89□□□□□ -0.51
NCSTN-202ENST00000368063 OR13C2Q8NGS9 318 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 ROBO4Q8WZ75 1007 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 RSC1A1Q92681 617 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 MRGPRFQ96AM1 343 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 LYSMD1Q96S90 227 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 CDC6Q99741 560 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 SLC6A7Q99884 636 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 TMEM106CQ9BVX2 250 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 MRPS33Q9Y291 106 aaKnown RBP11.89□□□□□ -0.51
NCSTN-202ENST00000368063 MTCL1Q9Y4B5 1905 aaKnown RBP11.89□□□□□ -0.51
NCSTN-202ENST00000368063 P2RX6O15547 441 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 SERPINF1P36955 418 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 PRKAG1P54619 331 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 UCP2P55851 309 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 NKX6-1P78426 367 aaPredicted RBP11.89□□□□□ -0.51
NCSTN-202ENST00000368063 GGTLC2Q14390 218 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 JOSD1Q15040 202 aaPredicted RBP11.89□□□□□ -0.51
NCSTN-202ENST00000368063 UBE2V2Q15819 145 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 GUK1Q16774 197 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 RPL7L1Q6DKI1 246 aaKnown RBP11.89□□□□□ -0.51
NCSTN-202ENST00000368063 NXPE4Q6UWF7 544 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 HS6ST3Q8IZP7 471 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 BHLHE23Q8NDY6 225 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 CXorf40AQ8TE69 158 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 KCNK15Q9H427 330 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 TAF9BQ9HBM6 251 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 OR14J1Q9UGF5 321 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 Q9Y3F1 56 aa11.89□□□□□ -0.51
NCSTN-202ENST00000368063 MDC1Q14676 2089 aaKnown RBP11.88□□□□□ -0.51
NCSTN-202ENST00000368063 C5orf51A6NDU8 294 aa11.88□□□□□ -0.51
NCSTN-202ENST00000368063 TMEM235A6NFC5 223 aa11.88□□□□□ -0.51
NCSTN-202ENST00000368063 SRPX2O60687 465 aaPredicted RBP11.88□□□□□ -0.51
NCSTN-202ENST00000368063 RCBTB2O95199 551 aa11.88□□□□□ -0.51
NCSTN-202ENST00000368063 ZIC2O95409 532 aaPredicted RBP11.88□□□□□ -0.51
NCSTN-202ENST00000368063 CXCL1P09341 107 aa11.88□□□□□ -0.51
NCSTN-202ENST00000368063 QDPRP09417 244 aa11.88□□□□□ -0.51
NCSTN-202ENST00000368063 PTGER1P34995 402 aa11.88□□□□□ -0.51
NCSTN-202ENST00000368063 BSGP35613 385 aa11.88□□□□□ -0.51
NCSTN-202ENST00000368063 DHPSP49366 369 aaPredicted RBP11.88□□□□□ -0.51
NCSTN-202ENST00000368063 TDGF1P3P51864 188 aa11.88□□□□□ -0.51
NCSTN-202ENST00000368063 IL13RA1P78552 427 aa11.88□□□□□ -0.51
NCSTN-202ENST00000368063 SLC10A1Q14973 349 aa11.88□□□□□ -0.51
NCSTN-202ENST00000368063 C14orf28Q4W4Y0 310 aa11.88□□□□□ -0.51
NCSTN-202ENST00000368063 TMEM268Q5VZI3 342 aa11.88□□□□□ -0.51
NCSTN-202ENST00000368063 KCTD9Q7L273 389 aa11.88□□□□□ -0.51
NCSTN-202ENST00000368063 TAF8Q7Z7C8 310 aa11.88□□□□□ -0.51
NCSTN-202ENST00000368063 OR51D1Q8NGF3 324 aa11.88□□□□□ -0.51
NCSTN-202ENST00000368063 OR9A4Q8NGU2 314 aa11.88□□□□□ -0.51
NCSTN-202ENST00000368063 ZNF461Q8TAF7 563 aa11.88□□□□□ -0.51
NCSTN-202ENST00000368063 ZNF764Q96H86 408 aaPredicted RBP11.88□□□□□ -0.51
NCSTN-202ENST00000368063 HIST1H2BLQ99880 126 aa11.88□□□□□ -0.51
NCSTN-202ENST00000368063 PRDM7Q9NQW5 492 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms