RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 TGFB1P01137 390 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 CLTBP09497 229 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 METTL15P1P0C7V9 234 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 SELEP16581 610 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 HTR2CP28335 458 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 PFN3P60673 137 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 UPP1Q16831 310 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 ZNF774Q6NX45 483 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 CFAP52Q8N1V2 620 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 ARL14Q8N4G2 192 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 ZNF615Q8N8J6 731 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 OR2T33Q8NG76 320 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 MITD1Q8WV92 249 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 MIB2Q96AX9 1013 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 FAM122AQ96E09 287 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 PRRC1Q96M27 445 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 ZNF426Q9BUY5 554 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 SRMSQ9H3Y6 488 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 PARD6AQ9NPB6 346 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 GLRX2Q9NS18 164 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 PTPRDP23468 1912 aa9.67□□□□□ -0.86
CAPN3-203ENST00000349748 A0A1B0GV50 99 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 A0A1W2PQH9 124 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 H0YIZ8 118 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 HMGN4O00479 90 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 GAPDHSO14556 408 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-203ENST00000349748 CDC42EP2O14613 210 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 INSIG1O15503 277 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 CTSLP07711 333 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 ELFN1P0C7U0 828 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 PSMB6P28072 239 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 SOX8P57073 446 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 TAS2R43P59537 309 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 ERVFRD-1P60508 538 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 ZNF763Q0D2J5 394 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 COL9A2Q14055 689 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-203ENST00000349748 EBPQ15125 230 aaKnown RBP9.66□□□□□ -0.86
CAPN3-203ENST00000349748 RPL7L1Q6DKI1 246 aaKnown RBP9.66□□□□□ -0.86
CAPN3-203ENST00000349748 WDR88Q6ZMY6 472 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 DEFB128Q7Z7B8 93 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 HSD17B11Q8NBQ5 300 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 TMEM104Q8NE00 496 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 RNF126Q9BV68 326 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 ELOVL1Q9BW60 279 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 SYT4Q9H2B2 425 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 KCNK15Q9H427 330 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 V9GY05 133 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 TRBV2A0A0J9YWF9 115 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 ARL5CA6NH57 179 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 GEMIN2O14893 280 aaKnown RBP9.66□□□□□ -0.86
CAPN3-203ENST00000349748 GPANK1O95872 356 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 RAB40ALP0C0E4 278 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 IL9P15248 144 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 PCSK1P29120 753 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 EFNB2P52799 333 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 PDX1P52945 283 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 TBX4P57082 545 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 RGS8P57771 180 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-203ENST00000349748 GUK1Q16774 197 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 RNF151Q2KHN1 245 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 FBXW9Q5XUX1 488 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 TEX38Q6PEX7 206 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 COMMD6Q7Z4G1 85 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 UBE3DQ7Z6J8 389 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 PEG10Q86TG7 708 aaKnown RBP9.66□□□□□ -0.86
CAPN3-203ENST00000349748 NRMQ8IXM6 262 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 CYB561A3Q8NBI2 242 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 RAB40AQ8WXH6 277 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 ZNF607Q96SK3 696 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 NCOR1P1Q9H4R4 102 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 A4GALTQ9NPC4 353 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 IL17CQ9P0M4 197 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 C5AR2Q9P296 337 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 FARSAQ9Y285 508 aaKnown RBP9.66□□□□□ -0.86
CAPN3-203ENST00000349748 NLRC5Q86WI3 1866 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 TRAV18A0A075B6X5 111 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 TMEM210A6NLX4 147 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 OGG1O15527 345 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 NME2P1O60361 137 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 AMY2AP04746 511 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 OR4Q2P0C623 313 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 PPP1R1AQ13522 171 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 HERPUD1Q15011 391 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 CDK5R1Q15078 307 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 ELOBQ15370 118 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 PRPF38BQ5VTL8 546 aaKnown RBP9.66□□□□□ -0.86
CAPN3-203ENST00000349748 CD300LGQ6UXG3 332 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 LINC00471Q8N535 108 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 OR10A7Q8NGE5 316 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 EDAQ92838 391 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 SMIM19Q96E16 107 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 MRI1Q9BV20 369 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 GPR174Q9BXC1 333 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 CWH43Q9H720 699 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 LPAR2Q9HBW0 351 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 MRPS33Q9Y291 106 aaKnown RBP9.66□□□□□ -0.86
CAPN3-203ENST00000349748 STARD10Q9Y365 291 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 FBXO7Q9Y3I1 522 aa9.66□□□□□ -0.86
CAPN3-203ENST00000349748 RANBP2P49792 3224 aaKnown RBP9.65□□□□□ -0.86
CAPN3-203ENST00000349748 PATJQ8NI35 1801 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms