RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 GMFGO60234 142 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 LRP3O75074 770 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 HTR2CP28335 458 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 RPS10P46783 165 aaKnown RBP16.79■□□□□ 0.28
SMPD1-201ENST00000342245 TAS2R31P59538 309 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 OR1Q1Q15612 314 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 OR8G1Q15617 311 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 USF2Q15853 346 aaPredicted RBP16.79■□□□□ 0.28
SMPD1-201ENST00000342245 RAB11BQ15907 218 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 ARHGAP40Q5TG30 622 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 TMEM220Q6QAJ8 160 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 GLB1LQ6UWU2 654 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 TRAPPC5Q8IUR0 188 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 ADAMTS15Q8TE58 950 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 CA5BP1Q8WTZ4 195 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 FKRPQ9H9S5 495 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 PLXNA2O75051 1894 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 OR2C1O95371 312 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 F3P13726 295 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 PDX1P52945 283 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 SNRPNP63162 240 aaKnown RBP16.79■□□□□ 0.28
SMPD1-201ENST00000342245 DUSP8Q13202 625 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 CLINT1Q14677 625 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 FAM46CQ5VWP2 391 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 WDR88Q6ZMY6 472 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 DCXRQ7Z4W1 244 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 WFDC5Q8TCV5 224 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 CDS1Q92903 461 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 FGF13Q92913 245 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 RRNAD1Q96FB5 475 aaKnown RBP16.79■□□□□ 0.28
SMPD1-201ENST00000342245 STACQ99469 402 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 CEP350Q5VT06 3117 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 TRAV27A0A087WT01 109 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 TBC1D3BA6NDS4 549 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 LYPD3O95274 346 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 MAS1P04201 325 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 TBC1D3HP0C7X1 549 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 CSNK2A2P19784 350 aaPredicted RBP16.78■□□□□ 0.28
SMPD1-201ENST00000342245 EFNB2P52799 333 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 ZNF684Q5T5D7 378 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 TBC1D3GQ6DHY5 549 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 BIVMQ86UB2 503 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 ZNF280BQ86YH2 543 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 OR13D1Q8NGV5 346 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 OR51A7Q8NH64 312 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 NDUFAF3Q9BU61 184 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 CST11Q9H112 138 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 OR52A5Q9H2C5 316 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 SPACA1Q9HBV2 294 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 MSRAQ9UJ68 235 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 ZDHHC8Q9ULC8 765 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 DENND4CQ5VZ89 1909 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 DCTN6O00399 190 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 AGPAT2O15120 278 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 OR1F1O43749 312 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 PMP2P02689 132 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 PTNP21246 168 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 SERPINF1P36955 418 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 COL13A1Q5TAT6 717 aaPredicted RBP16.78■□□□□ 0.28
SMPD1-201ENST00000342245 C11orf96Q7Z7L8 435 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 ZNF595Q8IYB9 648 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 GPR148Q8TDV2 347 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 GLYATL1Q969I3 302 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 FAM3DQ96BQ1 224 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 SLC5A7Q9GZV3 580 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 FBXL21Q9UKT6 434 aa16.78■□□□□ 0.28
SMPD1-201ENST00000342245 ERAL1O75616 437 aaKnown RBP16.77■□□□□ 0.28
SMPD1-201ENST00000342245 ADAP1O75689 374 aa16.77■□□□□ 0.28
SMPD1-201ENST00000342245 PTBP3O95758 552 aaKnown RBP16.77■□□□□ 0.28
SMPD1-201ENST00000342245 TSPAN15O95858 294 aa16.77■□□□□ 0.28
SMPD1-201ENST00000342245 MYOGP15173 224 aa16.77■□□□□ 0.28
SMPD1-201ENST00000342245 PBLDP30039 288 aaPredicted RBP16.77■□□□□ 0.28
SMPD1-201ENST00000342245 UCP2P55851 309 aa16.77■□□□□ 0.28
SMPD1-201ENST00000342245 REEP5Q00765 189 aa16.77■□□□□ 0.28
SMPD1-201ENST00000342245 TNFRSF9Q07011 255 aa16.77■□□□□ 0.28
SMPD1-201ENST00000342245 C2orf76Q3KRA6 126 aa16.77■□□□□ 0.28
SMPD1-201ENST00000342245 ZNF658BQ4V348 819 aaPredicted RBP16.77■□□□□ 0.28
SMPD1-201ENST00000342245 SLC39A5Q6ZMH5 540 aa16.77■□□□□ 0.28
SMPD1-201ENST00000342245 KCTD9Q7L273 389 aa16.77■□□□□ 0.28
SMPD1-201ENST00000342245 OR9A4Q8NGU2 314 aa16.77■□□□□ 0.28
SMPD1-201ENST00000342245 SLC6A7Q99884 636 aa16.77■□□□□ 0.28
SMPD1-201ENST00000342245 COMMD4Q9H0A8 199 aa16.77■□□□□ 0.28
SMPD1-201ENST00000342245 PRO1933Q9H354 126 aa16.77■□□□□ 0.28
SMPD1-201ENST00000342245 PTGES2Q9H7Z7 377 aa16.77■□□□□ 0.28
SMPD1-201ENST00000342245 OR2S2Q9NQN1 319 aa16.77■□□□□ 0.28
SMPD1-201ENST00000342245 CHRNA9Q9UGM1 479 aa16.77■□□□□ 0.28
SMPD1-201ENST00000342245 HDGFL3Q9Y3E1 203 aa16.77■□□□□ 0.28
SMPD1-201ENST00000342245 Q9Y3F1 56 aa16.77■□□□□ 0.28
SMPD1-201ENST00000342245 WDR45Q9Y484 360 aa16.77■□□□□ 0.28
SMPD1-201ENST00000342245 MTCL1Q9Y4B5 1905 aaKnown RBP16.77■□□□□ 0.28
SMPD1-201ENST00000342245 C13orf42A0A1B0GVH6 325 aa16.77■□□□□ 0.27
SMPD1-201ENST00000342245 OR5H15A6NDH6 313 aa16.77■□□□□ 0.27
SMPD1-201ENST00000342245 OR5H1A6NKK0 313 aa16.77■□□□□ 0.27
SMPD1-201ENST00000342245 C1QTNF3-AMACRE9PGA6 284 aa16.77■□□□□ 0.27
SMPD1-201ENST00000342245 SLC17A2O00624 439 aa16.77■□□□□ 0.27
SMPD1-201ENST00000342245 DOK2O60496 412 aa16.77■□□□□ 0.27
SMPD1-201ENST00000342245 FCMRO60667 390 aa16.77■□□□□ 0.27
SMPD1-201ENST00000342245 CST4P01036 141 aa16.77■□□□□ 0.27
SMPD1-201ENST00000342245 ARG1P05089 322 aa16.77■□□□□ 0.27
SMPD1-201ENST00000342245 TSPAN7P41732 249 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms