RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CTF1Q16619 201 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 LINC00346Q8IVM7 164 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 Q8NA96 180 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 UFD1Q92890 307 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 PELI1Q96FA3 418 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 GPR137Q96N19 417 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CDADC1Q9BWV3 514 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 OR51E2Q9H255 320 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 RNF122Q9H9V4 155 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 EMC7Q9NPA0 242 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 TRIM36Q9NQ86 728 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ZNF175Q9Y473 711 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 UGT2A1Q9Y4X1 527 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 PHYHO14832 338 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 LRRTM2O43300 516 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 AIREO43918 545 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 YES1P07947 543 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CELP19835 753 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 EDNRAP25101 427 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ZNF684Q5T5D7 378 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SLC18B1Q6NT16 456 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 C19orf48Q6RUI8 117 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 P4HA3Q7Z4N8 544 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 FGD2Q7Z6J4 655 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ADGRE4PQ86SQ3 457 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 GPR137CQ8N3F9 429 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ZNF837Q96EG3 531 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 TRIB1Q96RU8 372 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ACOXLQ9NUZ1 547 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 NDUFB11Q9NX14 153 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 MRM2Q9UI43 246 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 IKZF2Q9UKS7 526 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 GRIP1Q9Y3R0 1128 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SIRT4Q9Y6E7 314 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 FREM1Q5H8C1 2179 aa13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 OR14I1A6ND48 311 aa13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ATE1O95260 518 aa13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 OR8G3PP0DMU2 310 aa13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 GBX2P52951 348 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 BDH1Q02338 343 aa13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SGCAQ16586 387 aa13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 PCK2Q16822 640 aa13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 TEX30Q5JUR7 227 aa13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CORO6Q6QEF8 472 aa13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 RPTNQ6XPR3 784 aa13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 PLEKHG7Q6ZR37 379 aa13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CISD2Q8N5K1 135 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ZNF454Q8N9F8 522 aa13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ALKBH3Q96Q83 286 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ABHD6Q9BV23 337 aa13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CRLF2Q9HC73 371 aa13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 B3GAT2Q9NPZ5 323 aa13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 POLE4Q9NR33 117 aa13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 PARPBPQ9NWS1 579 aa13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CLCF1Q9UBD9 225 aa13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 TUBD1Q9UJT1 453 aa13.03□□□□□ -0.32
CDK5RAP3-201ENST00000338399 LOC100506127A0A0U1RQW1 187 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 METTL15A6NJ78 407 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 TMCC2O75069 709 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 IGHV3-9P01782 118 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 KRT8P05787 483 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 FCGR2AP12318 317 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 PSMB10P40306 273 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 GUCA1AP43080 201 aaPredicted RBP13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CAPZA2P47755 286 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ZNF84P51523 738 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 VBP1P61758 197 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 EGR3Q06889 387 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 AQP6Q13520 282 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 TSPO2Q5TGU0 170 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SPATC1Q76KD6 591 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 LINGO2Q7L985 606 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 DCXRQ7Z4W1 244 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 YIPF7Q8N8F6 280 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ASB17Q8WXJ9 295 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 TMEM203Q969S6 136 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CHCHD6Q9BRQ6 235 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 TTYH2Q9BSA4 534 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SLCO5A1Q9H2Y9 848 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SLCO1C1Q9NYB5 712 aa13.02□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ARHGAP21Q5T5U3 1957 aa13.02□□□□□ -0.33
CDK5RAP3-201ENST00000338399 TACSTD2P09758 323 aa13.02□□□□□ -0.33
CDK5RAP3-201ENST00000338399 PSMA1P25786 263 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-201ENST00000338399 TGFBR1P36897 503 aa13.02□□□□□ -0.33
CDK5RAP3-201ENST00000338399 TAS2R43P59537 309 aa13.02□□□□□ -0.33
CDK5RAP3-201ENST00000338399 RPS25P62851 125 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-201ENST00000338399 KCNMB1Q16558 191 aa13.02□□□□□ -0.33
CDK5RAP3-201ENST00000338399 SOWAHCQ53LP3 525 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-201ENST00000338399 KRTCAP3Q53RY4 240 aa13.02□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ZNF324BQ6AW86 544 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ZNF585AQ6P3V2 769 aa13.02□□□□□ -0.33
CDK5RAP3-201ENST00000338399 LRRN1Q6UXK5 716 aa13.02□□□□□ -0.33
CDK5RAP3-201ENST00000338399 FOXL2NBQ6ZUU3 175 aa13.02□□□□□ -0.33
CDK5RAP3-201ENST00000338399 NUFIP2Q7Z417 695 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-201ENST00000338399 FAM220AQ7Z4H9 259 aa13.02□□□□□ -0.33
CDK5RAP3-201ENST00000338399 KCTD20Q7Z5Y7 419 aa13.02□□□□□ -0.33
CDK5RAP3-201ENST00000338399 CYB5R1Q9UHQ9 305 aa13.02□□□□□ -0.33
CDK5RAP3-201ENST00000338399 POLR1DQ9Y2S0 133 aa13.02□□□□□ -0.33
CDK5RAP3-201ENST00000338399 SF3B6Q9Y3B4 125 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms