RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 SPATC1Q76KD6 591 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 LINC00346Q8IVM7 164 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 YIPF7Q8N8F6 280 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 AMELYQ99218 206 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 BCL7BQ9BQE9 202 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 PRDM14Q9GZV8 571 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 EMC3Q9P0I2 261 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 A0A087WV48 116 aa13□□□□□ -0.33
CBX3-201ENST00000337620 SLC22A20A6NK97 555 aa13□□□□□ -0.33
CBX3-201ENST00000337620 TMCC2O75069 709 aa13□□□□□ -0.33
CBX3-201ENST00000337620 MRPL33O75394 65 aaKnown RBP13□□□□□ -0.33
CBX3-201ENST00000337620 UPK3AO75631 287 aa13□□□□□ -0.33
CBX3-201ENST00000337620 TGM6O95932 706 aa13□□□□□ -0.33
CBX3-201ENST00000337620 KRT8P05787 483 aa13□□□□□ -0.33
CBX3-201ENST00000337620 TACSTD2P09758 323 aa13□□□□□ -0.33
CBX3-201ENST00000337620 FAM87AP0C7U9 286 aa13□□□□□ -0.33
CBX3-201ENST00000337620 PSMB10P40306 273 aa13□□□□□ -0.33
CBX3-201ENST00000337620 CAPZA2P47755 286 aa13□□□□□ -0.33
CBX3-201ENST00000337620 RPS25P62851 125 aaKnown RBP13□□□□□ -0.33
CBX3-201ENST00000337620 RNPS1Q15287 305 aaKnown RBP13□□□□□ -0.33
CBX3-201ENST00000337620 ZNF684Q5T5D7 378 aa13□□□□□ -0.33
CBX3-201ENST00000337620 CORO6Q6QEF8 472 aa13□□□□□ -0.33
CBX3-201ENST00000337620 UNQ6494/PRO21346Q6UXR6 183 aa13□□□□□ -0.33
CBX3-201ENST00000337620 FAM220AQ7Z4H9 259 aa13□□□□□ -0.33
CBX3-201ENST00000337620 OR5M9Q8NGP3 310 aa13□□□□□ -0.33
CBX3-201ENST00000337620 SARAFQ96BY9 339 aa13□□□□□ -0.33
CBX3-201ENST00000337620 TM9SF2Q99805 663 aa13□□□□□ -0.33
CBX3-201ENST00000337620 TTYH2Q9BSA4 534 aa13□□□□□ -0.33
CBX3-201ENST00000337620 CENPOQ9BU64 300 aa13□□□□□ -0.33
CBX3-201ENST00000337620 TMED9Q9BVK6 235 aa13□□□□□ -0.33
CBX3-201ENST00000337620 RNF167Q9H6Y7 350 aa13□□□□□ -0.33
CBX3-201ENST00000337620 EMC7Q9NPA0 242 aa13□□□□□ -0.33
CBX3-201ENST00000337620 MRM2Q9UI43 246 aaKnown RBP13□□□□□ -0.33
CBX3-201ENST00000337620 STUB1Q9UNE7 303 aa13□□□□□ -0.33
CBX3-201ENST00000337620 CACNA1GO43497 2377 aa13□□□□□ -0.33
CBX3-201ENST00000337620 PHF3Q92576 2039 aaKnown RBP13□□□□□ -0.33
CBX3-201ENST00000337620 PIEZO2Q9H5I5 2752 aa13□□□□□ -0.33
CBX3-201ENST00000337620 METTL15A6NJ78 407 aa13□□□□□ -0.33
CBX3-201ENST00000337620 SLC22A1O15245 554 aa13□□□□□ -0.33
CBX3-201ENST00000337620 DHHO43323 396 aa13□□□□□ -0.33
CBX3-201ENST00000337620 GPX5O75715 221 aa13□□□□□ -0.33
CBX3-201ENST00000337620 RPP14O95059 124 aaKnown RBP13□□□□□ -0.33
CBX3-201ENST00000337620 CRYABP02511 175 aaKnown RBP13□□□□□ -0.33
CBX3-201ENST00000337620 CRYBB2P43320 205 aa13□□□□□ -0.33
CBX3-201ENST00000337620 TAS2R43P59537 309 aa13□□□□□ -0.33
CBX3-201ENST00000337620 EGR3Q06889 387 aa13□□□□□ -0.33
CBX3-201ENST00000337620 SLC3A1Q07837 685 aa13□□□□□ -0.33
CBX3-201ENST00000337620 NFATC3Q12968 1075 aa13□□□□□ -0.33
CBX3-201ENST00000337620 SGCAQ16586 387 aa13□□□□□ -0.33
CBX3-201ENST00000337620 C10orf128Q5T292 105 aa13□□□□□ -0.33
CBX3-201ENST00000337620 ARL9Q6T311 187 aa13□□□□□ -0.33
CBX3-201ENST00000337620 DCXRQ7Z4W1 244 aa13□□□□□ -0.33
CBX3-201ENST00000337620 KCTD20Q7Z5Y7 419 aa13□□□□□ -0.33
CBX3-201ENST00000337620 GPR137CQ8N3F9 429 aa13□□□□□ -0.33
CBX3-201ENST00000337620 ZNF454Q8N9F8 522 aa13□□□□□ -0.33
CBX3-201ENST00000337620 NDNFQ8TB73 568 aa13□□□□□ -0.33
CBX3-201ENST00000337620 ASB17Q8WXJ9 295 aa13□□□□□ -0.33
CBX3-201ENST00000337620 TMEM45BQ96B21 275 aa13□□□□□ -0.33
CBX3-201ENST00000337620 ABHD6Q9BV23 337 aa13□□□□□ -0.33
CBX3-201ENST00000337620 PLSCR2Q9NRY7 297 aa13□□□□□ -0.33
CBX3-201ENST00000337620 SLCO1C1Q9NYB5 712 aa13□□□□□ -0.33
CBX3-201ENST00000337620 PTTG2Q9NZH5 202 aa13□□□□□ -0.33
CBX3-201ENST00000337620 SSR3Q9UNL2 185 aa13□□□□□ -0.33
CBX3-201ENST00000337620 POLR1DQ9Y2S0 133 aa13□□□□□ -0.33
CBX3-201ENST00000337620 YES1P07947 543 aa12.99□□□□□ -0.33
CBX3-201ENST00000337620 GABRA5P31644 462 aa12.99□□□□□ -0.33
CBX3-201ENST00000337620 SIRPAP78324 504 aa12.99□□□□□ -0.33
CBX3-201ENST00000337620 INAQ16352 499 aa12.99□□□□□ -0.33
CBX3-201ENST00000337620 TEX30Q5JUR7 227 aa12.99□□□□□ -0.33
CBX3-201ENST00000337620 LRRN1Q6UXK5 716 aa12.99□□□□□ -0.33
CBX3-201ENST00000337620 P4HA3Q7Z4N8 544 aa12.99□□□□□ -0.33
CBX3-201ENST00000337620 SNRNP27Q8WVK2 155 aaKnown RBP12.99□□□□□ -0.33
CBX3-201ENST00000337620 ZCCHC14Q8WYQ9 949 aaKnown RBP12.99□□□□□ -0.33
CBX3-201ENST00000337620 ZNF837Q96EG3 531 aaPredicted RBP12.99□□□□□ -0.33
CBX3-201ENST00000337620 ALKBH3Q96Q83 286 aaPredicted RBP12.99□□□□□ -0.33
CBX3-201ENST00000337620 CRLF2Q9HC73 371 aa12.99□□□□□ -0.33
CBX3-201ENST00000337620 PARPBPQ9NWS1 579 aa12.99□□□□□ -0.33
CBX3-201ENST00000337620 SF3B6Q9Y3B4 125 aaKnown RBP12.99□□□□□ -0.33
CBX3-201ENST00000337620 UGT2A1Q9Y4X1 527 aa12.99□□□□□ -0.33
CBX3-201ENST00000337620 BSNQ9UPA5 3926 aa12.99□□□□□ -0.33
CBX3-201ENST00000337620 CACNA1CQ13936 2221 aa12.99□□□□□ -0.33
CBX3-201ENST00000337620 SULT1C4O75897 302 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 KRT33AO76009 404 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 IGHV3-9P01782 118 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 ZNF182P17025 639 aaPredicted RBP12.98□□□□□ -0.33
CBX3-201ENST00000337620 EDNRAP25101 427 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 ZNF84P51523 738 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 ZNF133P52736 654 aaPredicted RBP12.98□□□□□ -0.33
CBX3-201ENST00000337620 GPR50Q13585 617 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 PCK2Q16822 640 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 LIPNQ5VXI9 398 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 KCTD18Q6PI47 426 aaPredicted RBP12.98□□□□□ -0.33
CBX3-201ENST00000337620 KRT77Q7Z794 578 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 TRIB1Q96RU8 372 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 MROQ9BYG7 248 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 BCO1Q9HAY6 547 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 ELOVL3Q9HB03 270 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 B3GAT2Q9NPZ5 323 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 POLE4Q9NR33 117 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 CYB5R1Q9UHQ9 305 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms