RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 C10orf128Q5T292 105 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 ARMC4Q5T2S8 1044 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 ARL9Q6T311 187 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 CALHM3Q86XJ0 350 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 TREML1Q86YW5 311 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 CPEB3Q8NE35 698 aaKnown RBP9.11□□□□□ -0.95
CAPN3-202ENST00000337571 MOSPD2Q8NHP6 518 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 LIPHQ8WWY8 451 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 RAB1CQ92928 201 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 RAB39BQ96DA2 213 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 BPIFA2Q96DR5 249 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 ZNF583Q96ND8 569 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 SEPHS2Q99611 448 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 EGLN1Q9GZT9 426 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 RACGAP1Q9H0H5 632 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 TXNIPQ9H3M7 391 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 C20orf141Q9NUB4 165 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 NKIRAS2Q9NYR9 191 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 A0A0A6YYJ9 748 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 C5orf49A4QMS7 147 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 NPIPB13A6NJU9 1138 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 FAM157AC9JC47 383 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 CLDN25C9JDP6 229 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 NPIPB4C9JG80 1138 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 SLC2A10O95528 541 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 IGHV3-13P01766 116 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 MMP7P09237 267 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-202ENST00000337571 IFI30P13284 250 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 SNRPBP14678 240 aaKnown RBP9.1□□□□□ -0.95
CAPN3-202ENST00000337571 ZNF32P17041 273 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 ITGA2P17301 1181 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 CDAP32320 146 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 KDELR2P33947 212 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 LIPAP38571 399 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 ZNF81P51508 661 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 ARHGDIAP52565 204 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 ZNF133P52736 654 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-202ENST00000337571 CRYBA2P53672 197 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 RPL27P61353 136 aaKnown RBP9.1□□□□□ -0.95
CAPN3-202ENST00000337571 PCBD1P61457 104 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 ERVS71-1P61550 626 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 TOP3AQ13472 1001 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-202ENST00000337571 FAM209AQ5JX71 171 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 FAM27BQ5VT28 67 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 RRM2BQ7LG56 351 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 PEG10Q86TG7 708 aaKnown RBP9.1□□□□□ -0.95
CAPN3-202ENST00000337571 OR2T12Q8NG77 320 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 ZNF418Q8TF45 676 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-202ENST00000337571 TSPAN32Q96QS1 320 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 ALG12Q9BV10 488 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 FNDC11Q9BVV2 318 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 SAP30LQ9HAJ7 183 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 CYSLTR2Q9NS75 346 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 AP3M1Q9Y2T2 418 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 TIMM10BQ9Y5J6 103 aa9.1□□□□□ -0.95
CAPN3-202ENST00000337571 ELOVL7A1L3X0 281 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 A6NIZ1 184 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 WNT9BO14905 357 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 GSTA4O15217 222 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 SPRY3O43610 288 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 RP2O75695 350 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 NCR1O76036 304 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 MPZL1O95297 269 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 PNPP00491 289 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 CTXN1P60606 82 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 RAP1BP61224 184 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 LMO4P61968 165 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 RAP1AP62834 184 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 ERVK-25P63136 954 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 PSG4Q00888 419 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 GLO1Q04760 184 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 SLC3A1Q07837 685 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 SF3A3Q12874 501 aaKnown RBP eCLIP9.09□□□□□ -0.95
CAPN3-202ENST00000337571 ANKDD1AQ495B1 522 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 AVPI1Q5T686 147 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 FAM205BPQ63HN1 556 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 C12orf54Q6X4T0 127 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 USP51Q70EK9 711 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 OAFQ86UD1 273 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 OR51A7Q8NH64 312 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 AKR7LQ8NHP1 331 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 CCL17Q92583 94 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 HDAC2Q92769 488 aaKnown RBP9.09□□□□□ -0.95
CAPN3-202ENST00000337571 ELMOD3Q96FG2 381 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 PRRC1Q96M27 445 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 ZNF665Q9H7R5 613 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 ELOVL3Q9HB03 270 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 SAR1AQ9NR31 198 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 ZDHHC8Q9ULC8 765 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 HIF3AQ9Y2N7 669 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 UGT2A1Q9Y4X1 527 aa9.09□□□□□ -0.95
CAPN3-202ENST00000337571 A0A0G2JMP0 313 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 A0A0X1KG70 313 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 A0A1W2PPL8 197 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 C12orf71A8MTZ7 269 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 EFCAB9A8MZ26 197 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 FAM220BPB1ANY3 271 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 ZNF682O95780 498 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 IFNW1P05000 195 aa9.08□□□□□ -0.96
CAPN3-202ENST00000337571 CST2P09228 141 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms