RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 RORCP51449 518 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 GFERP55789 205 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 AP3S2P59780 193 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 TPBGQ13641 420 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 WDR74Q6RFH5 385 aaPredicted RBP6.87□□□□□ -1.31
TRIM42-201ENST00000286349 RBMS3Q6XE24 437 aaKnown RBP6.87□□□□□ -1.31
TRIM42-201ENST00000286349 TMPRSS11AQ6ZMR5 421 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 COLCA1Q6ZS62 124 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 BCDIN3DQ7Z5W3 292 aaKnown RBP6.87□□□□□ -1.31
TRIM42-201ENST00000286349 GPR135Q8IZ08 494 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 ZNF614Q8N883 585 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 GDPD1Q8N9F7 314 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 RCBTB1Q8NDN9 531 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 OR4C6Q8NH72 309 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 C16orf52Q8NHV5 167 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 SAMD8Q96LT4 415 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 ARHGAP9Q9BRR9 750 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 MRI1Q9BV20 369 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 KATNB1Q9BVA0 655 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 RBCK1Q9BYM8 510 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 DPH1Q9BZG8 443 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 NUAK2Q9H093 628 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 RNF32Q9H0A6 362 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 LRRN3Q9H3W5 708 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 EXOSC4Q9NPD3 245 aaKnown RBP6.87□□□□□ -1.31
TRIM42-201ENST00000286349 MKKSQ9NPJ1 570 aaPredicted RBP6.87□□□□□ -1.31
TRIM42-201ENST00000286349 CMC2Q9NRP2 79 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 UBQLN2Q9UHD9 624 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 GSTK1Q9Y2Q3 226 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 HSPB11Q9Y547 144 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 CLCA3PQ9Y6N3 262 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 PI4KAP42356 2102 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 NPIPA5A0A0B4J1W7 369 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 A0A1B0GWA3 101 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 C5orf52A6NGY3 159 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 SERINC4A6NH21 518 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 RIIAD1A6NNX1 92 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 NPIPA7E9PJI5 369 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 TGFBR3LH3BV60 316 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 BHLHE40O14503 412 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 DSCR3O14972 297 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 RFPL3O75679 317 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 RHBDL1O75783 438 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 IGHEP01854 428 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 CTSBP07858 339 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 NPIPA8P0DM63 369 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 PAX1P15863 534 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 PNLIPP16233 465 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 RAB3BP20337 219 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 DDTP30046 118 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 SLC6A6P31641 620 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 GABRA5P31644 462 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 TGFBR1P36897 503 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 SOX3P41225 446 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 CRYBB2P43320 205 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 RAB25P57735 213 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 PMP22Q01453 160 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 POU4F2Q12837 409 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 ALG10BQ5I7T1 473 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 NDUFAF7Q7L592 441 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 MISPQ8IVT2 679 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 D2HGDHQ8N465 521 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 BCORP1Q8N888 145 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 ZNF615Q8N8J6 731 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 SLC2A12Q8TD20 617 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 CNOT9Q92600 299 aaKnown RBP6.87□□□□□ -1.31
TRIM42-201ENST00000286349 MARS2Q96GW9 593 aaKnown RBP6.87□□□□□ -1.31
TRIM42-201ENST00000286349 PACRGQ96M98 296 aaPredicted RBP6.87□□□□□ -1.31
TRIM42-201ENST00000286349 NDC1Q9BTX1 674 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 ASPNQ9BXN1 380 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 SPRTNQ9H040 489 aaPredicted RBP6.87□□□□□ -1.31
TRIM42-201ENST00000286349 EXOSC3Q9NQT5 275 aaKnown RBP6.87□□□□□ -1.31
TRIM42-201ENST00000286349 SERTAD3Q9UJW9 196 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 SIGLEC7Q9Y286 467 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 PLEKHA6Q9Y2H5 1048 aa6.87□□□□□ -1.31
TRIM42-201ENST00000286349 EP300Q09472 2414 aaPredicted RBP6.87□□□□□ -1.31
TRIM42-201ENST00000286349 A8MV72 311 aaPredicted RBP6.86□□□□□ -1.31
TRIM42-201ENST00000286349 C17orf105B2RV13 164 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 RAF1P04049 648 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 TPOP07202 933 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 CT45A8P0DMV1 189 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 CT45A9P0DMV2 189 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 MAKP20794 623 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 MAOAP21397 527 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 TBXA2RP21731 343 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 PPICP45877 212 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 RFX3P48380 749 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 RAB2AP61019 212 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 BTG2P78543 158 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 AKIRIN2Q53H80 203 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 CT45A2Q5DJT8 189 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 SPANXN2Q5MJ10 180 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 LPCAT3Q6P1A2 487 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 BRICD5Q6PL45 260 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 VHLLQ6RSH7 139 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 LINC00114Q6XXX2 140 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 HSDL2Q6YN16 418 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 WDR88Q6ZMY6 472 aa6.86□□□□□ -1.31
TRIM42-201ENST00000286349 MEPCEQ7L2J0 689 aaKnown RBP6.86□□□□□ -1.31
TRIM42-201ENST00000286349 OAFQ86UD1 273 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms