RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 BRINP1O60477 761 aa12.82□□□□□ -0.36
TNFRSF11A-201ENST00000269485 NDUFB2O95178 105 aa12.82□□□□□ -0.36
TNFRSF11A-201ENST00000269485 HTR3BO95264 441 aa12.82□□□□□ -0.36
TNFRSF11A-201ENST00000269485 ZNF136P52737 540 aa12.82□□□□□ -0.36
TNFRSF11A-201ENST00000269485 TMEM176BQ3YBM2 270 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF11A-201ENST00000269485 SPEM1Q8N4L4 309 aa12.82□□□□□ -0.36
TNFRSF11A-201ENST00000269485 MOAP1Q96BY2 351 aa12.82□□□□□ -0.36
TNFRSF11A-201ENST00000269485 SCARF2Q96GP6 870 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF11A-201ENST00000269485 SHARPINQ9H0F6 387 aa12.82□□□□□ -0.36
TNFRSF11A-201ENST00000269485 CHRDQ9H2X0 955 aa12.82□□□□□ -0.36
TNFRSF11A-201ENST00000269485 TRIM36Q9NQ86 728 aa12.82□□□□□ -0.36
TNFRSF11A-201ENST00000269485 PCDHGB7Q9Y5F8 929 aa12.82□□□□□ -0.36
TNFRSF11A-201ENST00000269485 NOTCH2Q04721 2471 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 NUP210Q8TEM1 1887 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 UBE2QL1A1L167 161 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 C1orf196B1AJZ1 125 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 DCTN6O00399 190 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 LIMS3P0CW19 117 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 LIMS4P0CW20 117 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 PTAFRP25105 342 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 CFHR1Q03591 330 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 DUSP8Q13202 625 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 RBM39Q14498 530 aaKnown RBP12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 B3GNTL1Q67FW5 361 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 C5orf46Q6UWT4 87 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 NHLRC1Q6VVB1 395 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 NANOGP1Q8N7R0 232 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 MED18Q9BUE0 208 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 G6PC3Q9BUM1 346 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 ZNF471Q9BX82 626 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 FAM86C1Q9NVL1 165 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 PPP4R1LQ9P1A2 415 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 EIF3GO75821 320 aaKnown RBP eCLIP12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 AHSA1O95433 338 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 AGR2O95994 175 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 IGF2P01344 180 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 IL1AP01583 271 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 ZGLP1P0C6A0 271 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 HLA-DOBP13765 273 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 VEGFCP49767 419 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 NXPH1P58417 271 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 SLC25A35Q3KQZ1 300 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 METTL11BQ5VVY1 283 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 PRAMEF8Q5VWM4 474 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 PRAMEF7Q5VXH5 474 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 ULK3Q6PHR2 472 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 TMEM91Q6ZNR0 172 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 LIX1LQ8IVB5 337 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 IL22RA1Q8N6P7 574 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 SFXN5Q8TD22 340 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 CCDC74BQ96LY2 380 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 SLC19A3Q9BZV2 496 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 UBQLN4Q9NRR5 601 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 SLC22A13Q9Y226 551 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 ZFHX4Q86UP3 3567 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 A0A1B0GVI7 797 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 NFYAP23511 347 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 PRKAR1BP31321 381 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 ADAM8P78325 824 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 KIAA2026Q5HYC2 2103 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 KRT77Q7Z794 578 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 TMEM17Q86X19 198 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 ZNF687Q8N1G0 1237 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 NT5CQ8TCD5 201 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 DERL3Q96Q80 235 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 GSN-AS1Q9NRJ2 163 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 ASF1BQ9NVP2 202 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 ZMIZ1Q9ULJ6 1067 aa12.81□□□□□ -0.36
TNFRSF11A-201ENST00000269485 OR6C68A6NDL8 312 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 D6RAR5 112 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 MT-ND5P03915 603 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 HLA-DPB1P04440 258 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 ZNF627Q7L945 461 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 OR1M1Q8NGA1 313 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 OR2T4Q8NH00 348 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 IFI44Q8TCB0 444 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 TM4SF19Q96DZ7 209 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 RHOVQ96L33 236 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 TCF7L1Q9HCS4 588 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 A0A1B0GV90 55 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 ARPC1BO15143 372 aaKnown RBP12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 SURF4O15260 269 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 CDAP32320 146 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 KRBOX4Q5JUW0 171 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 LCN10Q6JVE6 187 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 MEPCEQ7L2J0 689 aaKnown RBP12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 ZNF550Q7Z398 422 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 GALNTL5Q7Z4T8 443 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 SLITRK4Q8IW52 837 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 OR10G3Q8NGC4 313 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 C1orf216Q8TAB5 229 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 ZNF417Q8TAU3 575 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 LCORQ96JN0 433 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 ZNF587Q96SQ5 575 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 FREM1Q5H8C1 2179 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 SHISA3A0PJX4 238 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 TCN2P20062 427 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 BAMBIQ13145 260 aa12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 GK2Q14410 553 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF11A-201ENST00000269485 ZNF770Q6IQ21 691 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms