RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 RPL3LQ92901 407 aaKnown RBP8.67□□□□□ -1.02
TTC1-201ENST00000231238 TMEM203Q969S6 136 aa8.67□□□□□ -1.02
TTC1-201ENST00000231238 SCMH1Q96GD3 660 aa8.67□□□□□ -1.02
TTC1-201ENST00000231238 TMED9Q9BVK6 235 aa8.67□□□□□ -1.02
TTC1-201ENST00000231238 ISG20L2Q9H9L3 353 aaKnown RBP8.67□□□□□ -1.02
TTC1-201ENST00000231238 SEC61A2Q9H9S3 476 aa8.67□□□□□ -1.02
TTC1-201ENST00000231238 PAQR5Q9NXK6 330 aaPredicted RBP8.67□□□□□ -1.02
TTC1-201ENST00000231238 MCTS1Q9ULC4 181 aaKnown RBP8.67□□□□□ -1.02
TTC1-201ENST00000231238 GSTK1Q9Y2Q3 226 aa8.67□□□□□ -1.02
TTC1-201ENST00000231238 COA3Q9Y2R0 106 aaPredicted RBP8.67□□□□□ -1.02
TTC1-201ENST00000231238 MSRB2Q9Y3D2 182 aa8.67□□□□□ -1.02
TTC1-201ENST00000231238 ZNF814B7Z6K7 855 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 MKRN2OSH3BPM6 223 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 J3QRE1 110 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 ZNF593O00488 134 aaPredicted RBP8.66□□□□□ -1.02
TTC1-201ENST00000231238 TRAF3IP2O43734 574 aaPredicted RBP8.66□□□□□ -1.02
TTC1-201ENST00000231238 RAMP1O60894 148 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 GPANK1O95872 356 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 ACTL6AO96019 429 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 TFP02787 698 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 EDNRAP25101 427 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 GABRA5P31644 462 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 CD79BP40259 229 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 ENTPD1P49961 510 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 AGFG1P52594 562 aaKnown RBP8.66□□□□□ -1.02
TTC1-201ENST00000231238 GFRA1P56159 465 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 OR12D2P58182 307 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 BDH1Q02338 343 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 ZNF85Q03923 595 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 FMODQ06828 376 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 SLC3A1Q07837 685 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 SPCS2Q15005 226 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 CTF1Q16619 201 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 DGUOKQ16854 277 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 LINC01590Q5TEZ4 76 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 ZNF544Q6NX49 715 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 DPY19L4Q7Z388 723 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 GGNQ86UU5 652 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 ZBTB46Q86UZ6 589 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 GLB1L2Q8IW92 636 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 PHC2Q8IXK0 858 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 EXD3Q8N9H8 876 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 ZNRF4Q8WWF5 429 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 ROBO4Q8WZ75 1007 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 TTYH2Q9BSA4 534 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 SF3B5Q9BWJ5 86 aaKnown RBP8.66□□□□□ -1.02
TTC1-201ENST00000231238 SRXN1Q9BYN0 137 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 DCSTAMPQ9H295 470 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 FANCFQ9NPI8 374 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 B3GAT2Q9NPZ5 323 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 NDUFB11Q9NX14 153 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 B3GAT1Q9P2W7 334 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 CAMK2AQ9UQM7 478 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.66□□□□□ -1.02
TTC1-201ENST00000231238 SPTBN2O15020 2390 aa8.66□□□□□ -1.02
TTC1-201ENST00000231238 MED13Q9UHV7 2174 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 IGLV1-36A0A0B4J1U3 117 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 LOC102725191A0A1B0GVB3 256 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 SHISA3A0PJX4 238 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 PSMD9O00233 223 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 SMAD9O15198 467 aaKnown RBP8.65□□□□□ -1.02
TTC1-201ENST00000231238 FZD7O75084 574 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 SLC43A1O75387 559 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 KRT33AO76009 404 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 GLSO94925 669 aaPredicted RBP8.65□□□□□ -1.02
TTC1-201ENST00000231238 RPP14O95059 124 aaKnown RBP8.65□□□□□ -1.02
TTC1-201ENST00000231238 HLA-DPB1P04440 258 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 ZNF182P17025 639 aaPredicted RBP8.65□□□□□ -1.02
TTC1-201ENST00000231238 KLK2P20151 261 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 PCSK6P29122 969 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 SOX6P35712 828 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 ZNF84P51523 738 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 P2RY4P51582 365 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 SUCLG1P53597 346 aaKnown RBP8.65□□□□□ -1.02
TTC1-201ENST00000231238 PMP22Q01453 160 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 RASGEF1BQ0VAM2 473 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 TPBGQ13641 420 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 EIF2B1Q14232 305 aaKnown RBP8.65□□□□□ -1.02
TTC1-201ENST00000231238 ETFDHQ16134 617 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 SSX1Q16384 188 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 ZNF239Q16600 458 aaKnown RBP8.65□□□□□ -1.02
TTC1-201ENST00000231238 HYAL4Q2M3T9 481 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 KCTD18Q6PI47 426 aaPredicted RBP8.65□□□□□ -1.02
TTC1-201ENST00000231238 GDPGP1Q6ZNW5 385 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 CREB3L2Q70SY1 520 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 FCRLAQ7L513 359 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 KCTD20Q7Z5Y7 419 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 KRT77Q7Z794 578 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 TIGD4Q8IY51 512 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 SYS1Q8N2H4 156 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 OR2AJ1Q8NGZ0 328 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 NDNFQ8TB73 568 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 ASB17Q8WXJ9 295 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 ACKR4Q9NPB9 350 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 GTF2A1LQ9UNN4 478 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 COPS3Q9UNS2 423 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 CPAMD8Q8IZJ3 1885 aa8.65□□□□□ -1.02
TTC1-201ENST00000231238 TRBV2A0A0J9YWF9 115 aa8.64□□□□□ -1.03
TTC1-201ENST00000231238 METTL15A6NJ78 407 aa8.64□□□□□ -1.03
TTC1-201ENST00000231238 GPR171O14626 319 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms