RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 SLC39A7Q92504 469 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 NPY6RQ99463 290 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 ZNF768Q9H5H4 540 aaKnown RBP13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 MN1Q10571 1320 aaPredicted RBP13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 GPR171O14626 319 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 HMGN2P05204 90 aaKnown RBP13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 OR2T7P0C7T2 308 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 ZNF91Q05481 1191 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 AAED1Q7RTV5 226 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 PQLC3Q8N755 202 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 MFSD9Q8NBP5 474 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 TIMM29Q9BSF4 260 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 KCNG2Q9UJ96 466 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 CER1O95813 267 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 CD80P33681 288 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 ZNF595Q8IYB9 648 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 SCARB1Q8WTV0 552 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 PECRQ9BY49 303 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 TRBV4-1A0A0J9YWV2 114 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 FAM72CH0Y354 149 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 CLDN2P57739 230 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 MFAP5Q13361 173 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 FAM72AQ5TYM5 149 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 FAM72DQ6L9T8 149 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 FAM72BQ86X60 149 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 NMNAT3Q96T66 252 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 LRFN3Q9BTN0 628 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 SMCHD1A6NHR9 2005 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 MYOFQ9NZM1 2061 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 OR52A4PA6NMU1 304 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 CTDSP2O14595 271 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 S100A8P05109 93 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 LYSMD4Q5XG99 296 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 UBE3DQ7Z6J8 389 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 OR6K3Q8NGY3 331 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 SLCO3A1Q9UIG8 710 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 TRAPPC1Q9Y5R8 145 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 PRSS56P0CW18 603 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 FGF7P21781 194 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 RPS25P62851 125 aaKnown RBP13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 TMEM183BQ1AE95 376 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 LEXMQ3ZCV2 418 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 CPZQ66K79 652 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 NCR3LG1Q68D85 454 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 SLC25A21Q9BQT8 299 aaPredicted RBP13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 SSR4P51571 173 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 GPR17Q13304 367 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 GGNBP1Q5YKI7 109 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 SLC35E4Q6ICL7 350 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 ADGRE4PQ86SQ3 457 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 MBD5Q9P267 1494 aa13.49□□□□□ -0.25
SPTLC2-201ENST00000216484 A0A1W2PNV4 684 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 FAM24AA6NFZ4 105 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 TCRBP04435 133 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 SLC25A4P12235 298 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 RNASEKQ6P5S7 137 aaKnown RBP13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 NAXDQ8IW45 347 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 GABARAPL1Q9H0R8 117 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 GALR2O43603 387 aaPredicted RBP13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 HSBP1O75506 76 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 LALBAP00709 142 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 GLAP06280 429 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 JAG1P78504 1218 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 DRAM2Q6UX65 266 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 PIGTQ969N2 578 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 ATRNO75882 1429 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 A0A087WV62 115 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 CDK2AP1O14519 115 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 EDN1P05305 212 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 FDXRP22570 491 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 SYT6Q5T7P8 510 aaPredicted RBP13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 BANF2Q9H503 90 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 EPHX3Q9H6B9 360 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 AAMDCQ9H7C9 122 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 C8orf33Q9H7E9 229 aaPredicted RBP13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 RBFOX1Q9NWB1 397 aaKnown RBP13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 TRAPPC4Q9Y296 219 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 GLI4P10075 376 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 SRP9P49458 86 aaKnown RBP13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 HBA1P69905 142 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 SLC35A1P78382 337 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 RPL24P83731 157 aaKnown RBP13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 TFAP2EQ6VUC0 442 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 PRSS45Q7RTY3 260 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 ANGPTL5Q86XS5 388 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 AKR7LQ8NHP1 331 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 SLC35B4Q969S0 331 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 SLC12A9Q9BXP2 914 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 DMAC2Q9NW81 257 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 NUP98P52948 1817 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 GASTP01350 101 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 PXDC1Q5TGL8 231 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 TGIF2LYQ8IUE0 185 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 CELF2-AS1Q8N7Q2 184 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 NKAIN3Q8N8D7 197 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 AGPAT4Q9NRZ5 378 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 MUTYHQ9UIF7 546 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 NPTNQ9Y639 398 aa13.48□□□□□ -0.25
SPTLC2-201ENST00000216484 SLC6A11P48066 632 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms