RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Pla2g7Q60963 440 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Tmem158Q6F5E0 286 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Znf768Q8R0T2 568 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Tmed4Q8R1V4 227 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Vmn1r23Q8R2D0 302 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr1495Q8VEZ4 319 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Spryd4Q91WK1 207 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Gm10762Q9CZN6 115 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Efcab11Q9D0E5 162 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Herpud2Q9JJC9 404 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Xlr4bQ9JJQ7 215 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Gm21497A0A087WRK3 222 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Klhl15A2AAX3 604 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Pgam2O70250 253 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Dll3O88516 592 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Ccl4P14097 92 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 PpibP24369 216 aaKnown RBP14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Thbs1P35441 1170 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr517Q7TRU4 314 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 IfnkQ7TSL0 199 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Cldn34b3Q80ZS5 209 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Pced1bQ8BGX1 433 aaKnown RBP14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Sdhaf3Q8BQU3 125 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Lrrc26Q91W20 331 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Lnx2Q91XL2 687 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Zmat5Q9CQR5 170 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Gabra4Q9D6F4 552 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Chst11Q9JME2 352 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Lbx2Q9WUN8 195 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Zfp599E9PWP1 548 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Ms4a7E9Q9V5 267 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Mep1aP28825 747 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Cdk5r1P61809 307 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Timm8a2Q4FZG7 97 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 XkrxQ5GH68 449 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 RgmaQ6PCX7 454 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr1134Q7TR43 312 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Lrrc39Q8BGI7 337 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Eif1axQ8BMJ3 144 aaKnown RBP14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Cd177Q8R2S8 817 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr229Q8VFN5 307 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Fitm1Q91V79 292 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Brix1Q9DCA5 353 aaKnown RBP14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Nxt1Q9QZV9 140 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Padi1Q9Z185 662 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Gm7697A0A0J9YUH2 350 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Gm9495A0A0J9YUZ3 350 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Tmem182B2RVY9 229 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Calhm1D3Z291 348 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Gm21972J3QN38 98 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Defa14P50712 85 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Tas2r123P59528 333 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Dus4lQ32M08 324 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Mfsd12Q3U481 476 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr270Q7TS19 314 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Slc30a6Q8BJM5 460 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Tmbim1Q8BJZ3 309 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 PcgF3Q8BTQ0 241 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Rspry1Q8BVR6 576 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Gpr157Q8C206 330 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Lyrm4Q8K215 91 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Tctn3Q8R2Q6 595 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr1079Q8VF52 315 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Slco1b2Q9JJL3 689 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 SpdefQ9WTP3 325 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Decr2Q9WV68 292 aa14.8□□□□□ -0.04
Trim28-201ENSMUST00000005705 Gm20489A2AGH5 449 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Rdh19G5E8H9 318 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Uap1l1Q3TW96 507 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Dnaaf3Q3UYV8 586 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Slc35a1Q61420 336 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Rnf222Q8CEF8 211 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Cml2Q8CHQ9 238 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Ocel1Q8VCR9 219 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr531Q8VGL2 304 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr558Q8VGZ7 317 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Galnt11Q921L8 608 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 NosipQ9D6T0 301 aaKnown RBP14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 DptQ9QZZ6 201 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Bpnt1Q9Z0S1 308 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 A26c2A0A140LHE4 291 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Skint8A7XV07 398 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Sult6b2B7ZWN4 290 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Mapk14P47811 360 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Serpinf1P97298 417 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Cnn2Q08093 305 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Mier2Q3U3N0 541 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 1700057G04RikQ3V0U0 232 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 ArhgdibQ61599 200 aaKnown RBP14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Mboat1Q8BH98 492 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Psmf1Q8BHL8 271 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Fbxw17Q8CFE8 466 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Zdhhc1Q8R0N9 484 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Cts8Q9JI81 333 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Dennd4cA6H8H2 1906 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Btbd2E9PUS2 523 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Taar7dQ5QD10 358 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Ssr4Q62186 172 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Man1c1Q6NXK9 625 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Ube2j2Q6P073 259 aa14.79□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms