RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 NPP2P39997 493 aa-0.72□□□□□ -2.52
snR40snR40 BIM1P40013 344 aa-0.72□□□□□ -2.52
snR40snR40 YMR034CQ05131 434 aaPredicted RBP-0.72□□□□□ -2.52
snR40snR40 AIM44Q99299 758 aa-0.72□□□□□ -2.52
snR40snR40 RAD4P14736 754 aa-0.73□□□□□ -2.53
snR40snR40 PPG1P32838 368 aa-0.73□□□□□ -2.53
snR40snR40 PRS1P32895 427 aaKnown RBP-0.73□□□□□ -2.53
snR40snR40 SET3P36124 751 aa-0.73□□□□□ -2.53
snR40snR40 PNT1P38969 423 aa-0.73□□□□□ -2.53
snR40snR40 CCT3P39077 534 aaKnown RBP-0.73□□□□□ -2.53
snR40snR40 VHR1P40522 640 aa-0.73□□□□□ -2.53
snR40snR40 RPL34BP40525 121 aaKnown RBP-0.73□□□□□ -2.53
snR40snR40 MPH1P40562 993 aa-0.73□□□□□ -2.53
snR40snR40 BST1P43571 1029 aa-0.73□□□□□ -2.53
snR40snR40 ASI2P53895 289 aa-0.73□□□□□ -2.53
snR40snR40 ULP1Q02724 621 aa-0.73□□□□□ -2.53
snR40snR40 VPS36Q06696 566 aa-0.73□□□□□ -2.53
snR40snR40 MLH2Q07980 695 aa-0.73□□□□□ -2.53
snR40snR40 TGL5Q12043 749 aa-0.73□□□□□ -2.53
snR40snR40 LEU2P04173 364 aaPredicted RBP-0.74□□□□□ -2.53
snR40snR40 THR1P17423 357 aaKnown RBP-0.74□□□□□ -2.53
snR40snR40 APD1P38281 316 aa-0.74□□□□□ -2.53
snR40snR40 SMK1P41808 388 aa-0.74□□□□□ -2.53
snR40snR40 CNN1P43618 361 aa-0.74□□□□□ -2.53
snR40snR40 COP1P53622 1201 aaKnown RBP-0.74□□□□□ -2.53
snR40snR40 SFB2P53953 876 aa-0.74□□□□□ -2.53
snR40snR40 ROD1Q02805 837 aa-0.74□□□□□ -2.53
snR40snR40 PKH1Q03407 766 aa-0.74□□□□□ -2.53
snR40snR40 USV1Q12132 391 aa-0.74□□□□□ -2.53
snR40snR40 FUR4P05316 633 aaKnown RBP-0.75□□□□□ -2.53
snR40snR40 RPS9BP05755 195 aaKnown RBP-0.75□□□□□ -2.53
snR40snR40 DBP5P20449 482 aaKnown RBP-0.75□□□□□ -2.53
snR40snR40 PZF1P39933 429 aa-0.75□□□□□ -2.53
snR40snR40 YND1P40009 630 aa-0.75□□□□□ -2.53
snR40snR40 OPT1P40897 799 aa-0.75□□□□□ -2.53
snR40snR40 CRZ1P53968 678 aa-0.75□□□□□ -2.53
snR40snR40 SND1Q04007 877 aa-0.75□□□□□ -2.53
snR40snR40 HRQ1Q05549 1077 aa-0.75□□□□□ -2.53
snR40snR40 NOC3Q07896 663 aaPredicted RBP-0.75□□□□□ -2.53
snR40snR40 YBR298C-AQ8TGK4 73 aa-0.75□□□□□ -2.53
snR40snR40 TAF13P11747 167 aa-0.76□□□□□ -2.53
snR40snR40 SYP1P25623 870 aaKnown RBP-0.76□□□□□ -2.53
snR40snR40 PRP40P33203 583 aaKnown RBP-0.76□□□□□ -2.53
snR40snR40 STB5P38699 743 aa-0.76□□□□□ -2.53
snR40snR40 BOL3P39724 118 aa-0.76□□□□□ -2.53
snR40snR40 YPI1P43587 155 aa-0.76□□□□□ -2.53
snR40snR40 BMS1Q08965 1183 aaKnown RBP-0.76□□□□□ -2.53
snR40snR40 CYB2P00175 591 aa-0.77□□□□□ -2.53
snR40snR40 YFL068WP0CX99 160 aa-0.77□□□□□ -2.53
snR40snR40 YLL066W-AP0CY00 160 aa-0.77□□□□□ -2.53
snR40snR40 YLL067W-AP0CY01 160 aa-0.77□□□□□ -2.53
snR40snR40 YHR078WP38799 552 aa-0.77□□□□□ -2.53
snR40snR40 ENT3P47160 408 aa-0.77□□□□□ -2.53
snR40snR40 MDM20Q12387 796 aaKnown RBP-0.77□□□□□ -2.53
snR40snR40 YLR111WQ12528 110 aa-0.77□□□□□ -2.53
snR40snR40 YLR415CO13578 112 aa-0.78□□□□□ -2.53
snR40snR40 KAR2P16474 682 aaKnown RBP-0.78□□□□□ -2.53
snR40snR40 CLN2P20438 545 aa-0.78□□□□□ -2.53
snR40snR40 MVD1P32377 396 aaKnown RBP-0.78□□□□□ -2.53
snR40snR40 NGG1P32494 702 aa-0.78□□□□□ -2.53
snR40snR40 STE13P33894 931 aa-0.78□□□□□ -2.53
snR40snR40 BRN1P38170 754 aa-0.78□□□□□ -2.53
snR40snR40 YGL117WP53133 265 aa-0.78□□□□□ -2.53
snR40snR40 HST1P53685 503 aa-0.78□□□□□ -2.53
snR40snR40 BET4Q00618 327 aa-0.78□□□□□ -2.53
snR40snR40 STP3Q05937 343 aa-0.78□□□□□ -2.53
snR40snR40 BSP1Q06604 576 aa-0.78□□□□□ -2.53
snR40snR40 YPS3Q12303 508 aa-0.78□□□□□ -2.53
snR40snR40 NOT3P06102 836 aaKnown RBP-0.79□□□□□ -2.54
snR40snR40 AQY1P0CD91 305 aa-0.79□□□□□ -2.54
snR40snR40 RPD3P32561 433 aa-0.79□□□□□ -2.54
snR40snR40 APL3P38065 1025 aa-0.79□□□□□ -2.54
snR40snR40 RKM3P38222 552 aa-0.79□□□□□ -2.54
snR40snR40 FMO1P38866 432 aa-0.79□□□□□ -2.54
snR40snR40 YIL108WP40483 696 aaKnown RBP-0.79□□□□□ -2.54
snR40snR40 BOR1P53838 576 aa-0.79□□□□□ -2.54
snR40snR40 SIW14P53965 281 aa-0.79□□□□□ -2.54
snR40snR40 BUL2Q03758 920 aaKnown RBP-0.79□□□□□ -2.54
snR40snR40 ATX2Q12067 313 aa-0.79□□□□□ -2.54
snR40snR40 RFM1Q12192 310 aa-0.79□□□□□ -2.54
snR40snR40 LAM4P38800 1345 aa-0.8□□□□□ -2.54
snR40snR40 CDC23P16522 626 aa-0.8□□□□□ -2.54
snR40snR40 PMA2P19657 947 aa-0.8□□□□□ -2.54
snR40snR40 CDC12P32468 407 aaKnown RBP-0.8□□□□□ -2.54
snR40snR40 MSN2P33748 704 aa-0.8□□□□□ -2.54
snR40snR40 RCK2P38623 610 aa-0.8□□□□□ -2.54
snR40snR40 SIC1P38634 284 aa-0.8□□□□□ -2.54
snR40snR40 KSP1P38691 1029 aaKnown RBP-0.8□□□□□ -2.54
snR40snR40 YGL039WP53183 348 aaKnown RBP-0.8□□□□□ -2.54
snR40snR40 YGR151CP53287 111 aa-0.8□□□□□ -2.54
snR40snR40 ADI1Q03677 179 aa-0.8□□□□□ -2.54
snR40snR40 YML020WQ03722 664 aa-0.8□□□□□ -2.54
snR40snR40 SPP382Q06411 708 aaPredicted RBP-0.8□□□□□ -2.54
snR40snR40 YLL056CQ12177 298 aa-0.8□□□□□ -2.54
snR40snR40 HEM1P09950 548 aaPredicted RBP-0.81□□□□□ -2.54
snR40snR40 YML002WP0CF17 737 aa-0.81□□□□□ -2.54
snR40snR40 GLN3P18494 730 aa-0.81□□□□□ -2.54
snR40snR40 PMT6P42934 759 aa-0.81□□□□□ -2.54
snR40snR40 ATG36P46983 293 aa-0.81□□□□□ -2.54
snR40snR40 GNP1P48813 663 aa-0.81□□□□□ -2.54
Retrieved 100 of 5,963 RNA–protein pairs in 118.5 ms