RNA–Protein interactions for RNA: YPL176C

TRE1, Transcript of Transferrin receptor-like protein, yeast

Gene TRE1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRE1	YPL176C	YMR111C	Q04461	462 aa	Predicted RBP	4.99	□□□□□ -1.61
TRE1	YPL176C	RPA190	P10964	1664 aa	Known RBP	4.99	□□□□□ -1.61
TRE1	YPL176C	RPL5	P26321	297 aa	Known RBP	4.98	□□□□□ -1.61
TRE1	YPL176C	SEC21	P32074	935 aa	Known RBP	4.98	□□□□□ -1.61
TRE1	YPL176C	DBF4	P32325	704 aa		4.98	□□□□□ -1.61
TRE1	YPL176C	SEG2	P34250	1132 aa		4.98	□□□□□ -1.61
TRE1	YPL176C	SHM2	P37291	469 aa	Known RBP	4.98	□□□□□ -1.61
TRE1	YPL176C	TIF4631	P39935	952 aa	Known RBP	4.98	□□□□□ -1.61
TRE1	YPL176C	RAD26	P40352	1085 aa		4.98	□□□□□ -1.61
TRE1	YPL176C	AIM20	P40451	204 aa		4.98	□□□□□ -1.61
TRE1	YPL176C	SAP155	P43612	1002 aa		4.98	□□□□□ -1.61
TRE1	YPL176C	HST1	P53685	503 aa		4.98	□□□□□ -1.61
TRE1	YPL176C	CNM67	P53865	581 aa	Known RBP	4.98	□□□□□ -1.61
TRE1	YPL176C	FDC1	Q03034	503 aa		4.98	□□□□□ -1.61
TRE1	YPL176C	DBP9	Q06218	594 aa	Known RBP	4.98	□□□□□ -1.61
TRE1	YPL176C	YDL073W	Q07454	984 aa		4.98	□□□□□ -1.61
TRE1	YPL176C	YPL066W	Q12194	479 aa		4.98	□□□□□ -1.61
TRE1	YPL176C	CDC25	P04821	1589 aa		4.98	□□□□□ -1.61
TRE1	YPL176C	MRPL25	P23369	157 aa		4.98	□□□□□ -1.61
TRE1	YPL176C	TFA2	P36145	328 aa		4.98	□□□□□ -1.61
TRE1	YPL176C	HSM3	P38348	480 aa		4.98	□□□□□ -1.61
TRE1	YPL176C	PCM1	P38628	557 aa	Known RBP	4.98	□□□□□ -1.61
TRE1	YPL176C	SKP2	P42843	763 aa		4.98	□□□□□ -1.61
TRE1	YPL176C	POL31	P46957	487 aa		4.98	□□□□□ -1.61
TRE1	YPL176C	YGL140C	P53120	1219 aa		4.98	□□□□□ -1.61
TRE1	YPL176C	PIL1	P53252	339 aa	Known RBP	4.98	□□□□□ -1.61
TRE1	YPL176C	SPO1	P53541	631 aa		4.98	□□□□□ -1.61
TRE1	YPL176C	YPL071C	Q02864	156 aa		4.98	□□□□□ -1.61
TRE1	YPL176C	YMR155W	Q03795	547 aa		4.98	□□□□□ -1.61
TRE1	YPL176C	YDR131C	Q03899	556 aa		4.98	□□□□□ -1.61
TRE1	YPL176C	NBA1	Q08229	501 aa	Known RBP	4.98	□□□□□ -1.61
TRE1	YPL176C	INO1	P11986	533 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	PMS1	P14242	873 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	FTH1	P38310	465 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	RIM11	P38615	370 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	YLF2	P38746	405 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	LTP1	P40347	161 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	ARE2	P53629	642 aa	Known RBP	4.97	□□□□□ -1.61
TRE1	YPL176C	ARC35	P53731	342 aa	Known RBP	4.97	□□□□□ -1.61
TRE1	YPL176C	TIM50	Q02776	476 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	YLR345W	Q06137	509 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	GUD1	Q07729	489 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	PEX15	Q08215	383 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	YDL176W	Q12027	708 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	NFI1	Q12216	726 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	RVB2	Q12464	471 aa	Known RBP	4.97	□□□□□ -1.61
TRE1	YPL176C	RKM4	Q12504	494 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	YDR461C-A	Q2V2P7	80 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	HVG1	P0CE11	249 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	FUS1	P11710	512 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	MSD1	P15179	658 aa	Known RBP	4.97	□□□□□ -1.61
TRE1	YPL176C	SEC23	P15303	768 aa	Known RBP	4.97	□□□□□ -1.61
TRE1	YPL176C	MLS1	P30952	554 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	ERG3	P32353	365 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	SER1	P33330	395 aa	Known RBP	4.97	□□□□□ -1.61
TRE1	YPL176C	YBR238C	P38330	731 aa	Known RBP	4.97	□□□□□ -1.61
TRE1	YPL176C	AXL2	P38928	823 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	PRK1	P40494	810 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	AGX1	P43567	385 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	SLD3	P53135	668 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	ECM9	Q02202	377 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	YMR265C	Q03508	461 aa	Known RBP	4.97	□□□□□ -1.61
TRE1	YPL176C	TY1A-DR2	Q03964	440 aa	Known RBP	4.97	□□□□□ -1.61
TRE1	YPL176C	SYT1	Q06836	1226 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	PCL8	Q08966	492 aa		4.97	□□□□□ -1.61
TRE1	YPL176C	SEM1	O94742	89 aa		4.96	□□□□□ -1.62
TRE1	YPL176C	MIH1	P23748	554 aa		4.96	□□□□□ -1.62
TRE1	YPL176C	MNE1	P24720	663 aa		4.96	□□□□□ -1.62
TRE1	YPL176C	YKU70	P32807	602 aa		4.96	□□□□□ -1.62
TRE1	YPL176C	OTU2	P38747	307 aa	Known RBP	4.96	□□□□□ -1.62
TRE1	YPL176C	YHR131C	P38835	850 aa		4.96	□□□□□ -1.62
TRE1	YPL176C	ARB1	P40024	610 aa	Known RBP	4.96	□□□□□ -1.62
TRE1	YPL176C	EMP65	P40085	556 aa		4.96	□□□□□ -1.62
TRE1	YPL176C	YJL068C	P40363	299 aa		4.96	□□□□□ -1.62
TRE1	YPL176C	FYV8	P46949	817 aa	Known RBP	4.96	□□□□□ -1.62
TRE1	YPL176C	LYS5	P50113	272 aa		4.96	□□□□□ -1.62
TRE1	YPL176C	MNP1	P53163	194 aa	Predicted RBP	4.96	□□□□□ -1.62
TRE1	YPL176C	SIW14	P53965	281 aa		4.96	□□□□□ -1.62
TRE1	YPL176C	ADE12	P80210	433 aa	Known RBP	4.96	□□□□□ -1.62
TRE1	YPL176C	CWC21	Q03375	135 aa	Known RBP	4.96	□□□□□ -1.62
TRE1	YPL176C	GAD1	Q04792	585 aa		4.96	□□□□□ -1.62
TRE1	YPL176C	KEL3	Q08979	651 aa	Predicted RBP	4.96	□□□□□ -1.62
TRE1	YPL176C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
TRE1	YPL176C	RPP1A	P05318	106 aa	Predicted RBP	4.96	□□□□□ -1.62
TRE1	YPL176C	SNF1	P06782	633 aa	Known RBP	4.96	□□□□□ -1.62
TRE1	YPL176C	FPS1	P23900	669 aa		4.96	□□□□□ -1.62
TRE1	YPL176C	MDL1	P33310	695 aa		4.96	□□□□□ -1.62
TRE1	YPL176C	ECM2	P38241	364 aa	Known RBP	4.96	□□□□□ -1.62
TRE1	YPL176C	DUN1	P39009	513 aa		4.96	□□□□□ -1.62
TRE1	YPL176C	FUN12	P39730	1002 aa	Known RBP	4.96	□□□□□ -1.62
TRE1	YPL176C	FMP10	P40098	244 aa		4.96	□□□□□ -1.62
TRE1	YPL176C	INP51	P40559	946 aa	Known RBP	4.96	□□□□□ -1.62
TRE1	YPL176C	LAM5	P43560	674 aa		4.96	□□□□□ -1.62
TRE1	YPL176C	AIM14	P53109	570 aa		4.96	□□□□□ -1.62
TRE1	YPL176C	TEP1	P53916	434 aa		4.96	□□□□□ -1.62
TRE1	YPL176C	BMS1	Q08965	1183 aa	Known RBP	4.96	□□□□□ -1.62
TRE1	YPL176C	MSH1	P25846	959 aa		4.95	□□□□□ -1.62
TRE1	YPL176C	DOM34	P33309	386 aa		4.95	□□□□□ -1.62
TRE1	YPL176C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
TRE1	YPL176C	MCD4	P36051	919 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms