RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W NGG1P32494 702 aa3.02□□□□□ -1.93
BRO1YPL084W MNN11P46985 422 aaKnown RBP3.02□□□□□ -1.93
BRO1YPL084W YBP2P53169 641 aa3.02□□□□□ -1.93
BRO1YPL084W TMA10Q06177 86 aa3.02□□□□□ -1.93
BRO1YPL084W TRE2Q08693 809 aa3.02□□□□□ -1.93
BRO1YPL084W DCS2Q12123 353 aa3.02□□□□□ -1.93
BRO1YPL084W YLR358CO13565 187 aa3.02□□□□□ -1.93
BRO1YPL084W THI80P35202 319 aa3.02□□□□□ -1.93
BRO1YPL084W RPP1P38786 293 aa3.02□□□□□ -1.93
BRO1YPL084W SSZ1P38788 538 aaKnown RBP3.02□□□□□ -1.93
BRO1YPL084W LEE1Q02799 301 aaKnown RBP3.02□□□□□ -1.93
BRO1YPL084W YLR415CO13578 112 aa3.01□□□□□ -1.93
BRO1YPL084W DAL3P32459 195 aa3.01□□□□□ -1.93
BRO1YPL084W DID4P36108 232 aa3.01□□□□□ -1.93
BRO1YPL084W GRX7P38068 203 aa3.01□□□□□ -1.93
BRO1YPL084W MAL31P38156 614 aa3.01□□□□□ -1.93
BRO1YPL084W BFA1P47113 574 aa3.01□□□□□ -1.93
BRO1YPL084W PRP31P49704 494 aaPredicted RBP3.01□□□□□ -1.93
BRO1YPL084W MCM6P53091 1017 aaKnown RBP3.01□□□□□ -1.93
BRO1YPL084W BRE5P53741 515 aaKnown RBP3.01□□□□□ -1.93
BRO1YPL084W COG6P53959 839 aa3.01□□□□□ -1.93
BRO1YPL084W GPD1Q00055 391 aaKnown RBP3.01□□□□□ -1.93
BRO1YPL084W RPS21BQ3E754 87 aaKnown RBP3.01□□□□□ -1.93
BRO1YPL084W CTF13P35203 478 aa3.01□□□□□ -1.93
BRO1YPL084W YHR202WP38887 602 aa3.01□□□□□ -1.93
BRO1YPL084W HXT6P39003 570 aaKnown RBP3.01□□□□□ -1.93
BRO1YPL084W HXT7P39004 570 aa3.01□□□□□ -1.93
BRO1YPL084W DUG1P43616 481 aaKnown RBP3.01□□□□□ -1.93
BRO1YPL084W YJR008WP47085 338 aa3.01□□□□□ -1.93
BRO1YPL084W YJR039WP47107 1121 aa3.01□□□□□ -1.93
BRO1YPL084W EXG2P52911 562 aa3.01□□□□□ -1.93
BRO1YPL084W MRPS35P53292 345 aa3.01□□□□□ -1.93
BRO1YPL084W NRD1P53617 575 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93 RIP-Chip
BRO1YPL084W YHM2Q04013 314 aa3.01□□□□□ -1.93
BRO1YPL084W TRM11Q12463 433 aa3.01□□□□□ -1.93
BRO1YPL084W RPS21AP0C0V8 87 aaKnown RBP3□□□□□ -1.93
BRO1YPL084W ELM1P32801 640 aa3□□□□□ -1.93
BRO1YPL084W YKR075CP36155 307 aa3□□□□□ -1.93
BRO1YPL084W ENP1P38333 483 aaKnown RBP3□□□□□ -1.93
BRO1YPL084W PEX14P53112 341 aa3□□□□□ -1.93
BRO1YPL084W RMP1Q12530 201 aa3□□□□□ -1.93
BRO1YPL084W ADE2P21264 571 aaKnown RBP3□□□□□ -1.93
BRO1YPL084W AEP2P22136 580 aa3□□□□□ -1.93
BRO1YPL084W TFC4P33339 1025 aa3□□□□□ -1.93
BRO1YPL084W YBR259WP38338 688 aa3□□□□□ -1.93
BRO1YPL084W NUG1P40010 520 aaKnown RBP3□□□□□ -1.93
BRO1YPL084W GPP2P40106 250 aaKnown RBP3□□□□□ -1.93
BRO1YPL084W MNN10P50108 393 aaKnown RBP3□□□□□ -1.93
BRO1YPL084W SEC65P29478 273 aa2.99□□□□□ -1.93
BRO1YPL084W AKL1P38080 1108 aaKnown RBP2.99□□□□□ -1.93
BRO1YPL084W FKH2P41813 862 aa2.99□□□□□ -1.93
BRO1YPL084W SET2P46995 733 aaKnown RBP2.99□□□□□ -1.93
BRO1YPL084W PTA1Q01329 785 aaPredicted RBP2.99□□□□□ -1.93
BRO1YPL084W NRG1Q03125 231 aa2.99□□□□□ -1.93
BRO1YPL084W LAS17Q12446 633 aa2.99□□□□□ -1.93
BRO1YPL084W PFK1P16861 987 aaKnown RBP2.99□□□□□ -1.93
BRO1YPL084W STE11P23561 717 aa2.99□□□□□ -1.93
BRO1YPL084W PLC1P32383 869 aa2.99□□□□□ -1.93
BRO1YPL084W MPT5P39016 859 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
BRO1YPL084W NIT2P47016 307 aa2.99□□□□□ -1.93
BRO1YPL084W PEX8P53248 589 aa2.99□□□□□ -1.93
BRO1YPL084W ARG5,6Q01217 863 aa2.99□□□□□ -1.93
BRO1YPL084W SND1Q04007 877 aa2.99□□□□□ -1.93
BRO1YPL084W YLR407WQ06070 228 aa2.99□□□□□ -1.93
BRO1YPL084W ISA1Q07821 250 aaPredicted RBP2.99□□□□□ -1.93
BRO1YPL084W ENB1Q08299 606 aa2.99□□□□□ -1.93
BRO1YPL084W HFI1Q12060 488 aa2.99□□□□□ -1.93
BRO1YPL084W OAF3P36023 863 aa2.98□□□□□ -1.93
BRO1YPL084W APN2P38207 520 aa2.98□□□□□ -1.93
BRO1YPL084W FAT1P38225 669 aa2.98□□□□□ -1.93
BRO1YPL084W SIC1P38634 284 aa2.98□□□□□ -1.93
BRO1YPL084W YHR112CP38716 378 aa2.98□□□□□ -1.93
BRO1YPL084W TGL5Q12043 749 aa2.98□□□□□ -1.93
BRO1YPL084W DCG1P32460 244 aa2.98□□□□□ -1.93
BRO1YPL084W BEM4P39011 633 aa2.98□□□□□ -1.93
BRO1YPL084W UBP5P39944 805 aa2.98□□□□□ -1.93
BRO1YPL084W SPC105P53148 917 aa2.98□□□□□ -1.93
BRO1YPL084W ERG5P54781 538 aa2.98□□□□□ -1.93
BRO1YPL084W YMR210WQ03649 449 aa2.98□□□□□ -1.93
BRO1YPL084W YOL057WQ08225 711 aa2.98□□□□□ -1.93
BRO1YPL084W GLN4P13188 809 aaKnown RBP2.97□□□□□ -1.93
BRO1YPL084W SER1P33330 395 aaKnown RBP2.97□□□□□ -1.93
BRO1YPL084W APL2P36000 726 aaPredicted RBP2.97□□□□□ -1.93
BRO1YPL084W BIT2P38346 545 aa2.97□□□□□ -1.93
BRO1YPL084W PHO23P50947 330 aa2.97□□□□□ -1.93
BRO1YPL084W REC102Q02721 264 aa2.97□□□□□ -1.93
BRO1YPL084W CLU1Q03690 1277 aaKnown RBP2.97□□□□□ -1.93
BRO1YPL084W GAD1Q04792 585 aa2.97□□□□□ -1.93
BRO1YPL084W YPR027CQ12079 277 aa2.97□□□□□ -1.93
BRO1YPL084W TRP4P07285 380 aaPredicted RBP2.97□□□□□ -1.93
BRO1YPL084W SWI6P09959 803 aa2.97□□□□□ -1.93
BRO1YPL084W IMG2P25642 146 aaPredicted RBP2.97□□□□□ -1.93
BRO1YPL084W APT2P36973 181 aa2.97□□□□□ -1.93
BRO1YPL084W YNL195CP40168 261 aa2.97□□□□□ -1.93
BRO1YPL084W COX18P53239 316 aa2.97□□□□□ -1.93
BRO1YPL084W TEX1P53851 422 aaKnown RBP2.97□□□□□ -1.93
BRO1YPL084W NOP15P53927 220 aaPredicted RBP2.97□□□□□ -1.93
BRO1YPL084W SKY1Q03656 742 aa2.97□□□□□ -1.93
BRO1YPL084W VHS3Q08438 674 aa2.97□□□□□ -1.93
BRO1YPL084W TMA7Q3E764 64 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms