RNA–Protein interactions for RNA: YOR235W

IRC13, Transcript of Dubious open reading frame, yeast

Gene IRC13, Length 315 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC13	YOR235W	UBP12	P39538	1254 aa		5.04	□□□□□ -1.6
IRC13	YOR235W	PCL10	P53124	433 aa		5.04	□□□□□ -1.6
IRC13	YOR235W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
IRC13	YOR235W	HRR25	P29295	494 aa	Known RBP	5.03	□□□□□ -1.6
IRC13	YOR235W	EFT1	P32324	842 aa	Known RBP	5.03	□□□□□ -1.6
IRC13	YOR235W	TRM2	P33753	639 aa		5.03	□□□□□ -1.6
IRC13	YOR235W	TYS1	P36421	394 aa	Known RBP	5.03	□□□□□ -1.6
IRC13	YOR235W	YBR259W	P38338	688 aa		5.03	□□□□□ -1.6
IRC13	YOR235W	FKH2	P41813	862 aa		5.03	□□□□□ -1.6
IRC13	YOR235W	YJR096W	P47137	282 aa		5.03	□□□□□ -1.6
IRC13	YOR235W	ORC4	P54791	529 aa		5.03	□□□□□ -1.6
IRC13	YOR235W	ARP4	P80428	489 aa		5.03	□□□□□ -1.6
IRC13	YOR235W	NRG1	Q03125	231 aa		5.03	□□□□□ -1.6
IRC13	YOR235W	AIM39	Q08223	395 aa		5.03	□□□□□ -1.6
IRC13	YOR235W	TGL5	Q12043	749 aa		5.03	□□□□□ -1.6
IRC13	YOR235W	ERG4	P25340	473 aa		5.02	□□□□□ -1.61
IRC13	YOR235W	MNN4	P36044	1178 aa		5.02	□□□□□ -1.61
IRC13	YOR235W	KTR4	P38131	464 aa		5.02	□□□□□ -1.61
IRC13	YOR235W	CKB2	P38930	258 aa		5.02	□□□□□ -1.61
IRC13	YOR235W	ECM1	P39715	212 aa		5.02	□□□□□ -1.61
IRC13	YOR235W	GPG1	P53130	126 aa		5.02	□□□□□ -1.61
IRC13	YOR235W	UME1	Q03010	460 aa		5.02	□□□□□ -1.61
IRC13	YOR235W	MTQ2	Q03920	221 aa	Predicted RBP	5.02	□□□□□ -1.61
IRC13	YOR235W	GRX4	P32642	244 aa		5.01	□□□□□ -1.61
IRC13	YOR235W	PRP31	P49704	494 aa	Predicted RBP	5.01	□□□□□ -1.61
IRC13	YOR235W	YBP2	P53169	641 aa		5.01	□□□□□ -1.61
IRC13	YOR235W	DLT1	Q04216	342 aa		5.01	□□□□□ -1.61
IRC13	YOR235W	DCS2	Q12123	353 aa		5.01	□□□□□ -1.61
IRC13	YOR235W	TRM13	Q12383	476 aa		5.01	□□□□□ -1.61
IRC13	YOR235W	ADE2	P21264	571 aa	Known RBP	5	□□□□□ -1.61
IRC13	YOR235W	SSZ1	P38788	538 aa	Known RBP	5	□□□□□ -1.61
IRC13	YOR235W	GID8	P40208	455 aa		5	□□□□□ -1.61
IRC13	YOR235W	YJR039W	P47107	1121 aa		5	□□□□□ -1.61
IRC13	YOR235W	YGR237C	P50089	785 aa		5	□□□□□ -1.61
IRC13	YOR235W	MUP1	P50276	574 aa		5	□□□□□ -1.61
IRC13	YOR235W	BRE5	P53741	515 aa	Known RBP	5	□□□□□ -1.61
IRC13	YOR235W	ARG5,6	Q01217	863 aa		5	□□□□□ -1.61
IRC13	YOR235W	LEE1	Q02799	301 aa	Known RBP	5	□□□□□ -1.61
IRC13	YOR235W	MET3	P08536	511 aa		4.99	□□□□□ -1.61
IRC13	YOR235W	CAF20	P12962	161 aa	Known RBP	4.99	□□□□□ -1.61
IRC13	YOR235W	PRP19	P32523	503 aa	Known RBP	4.99	□□□□□ -1.61
IRC13	YOR235W	APL2	P36000	726 aa	Predicted RBP	4.99	□□□□□ -1.61
IRC13	YOR235W	ELO3	P40319	345 aa		4.99	□□□□□ -1.61
IRC13	YOR235W	YIR042C	P40586	236 aa		4.99	□□□□□ -1.61
IRC13	YOR235W	GPP1	P41277	250 aa	Known RBP	4.99	□□□□□ -1.61
IRC13	YOR235W	AMA1	P50082	593 aa		4.99	□□□□□ -1.61
IRC13	YOR235W	TEX1	P53851	422 aa	Known RBP	4.99	□□□□□ -1.61
IRC13	YOR235W	KIN4	Q01919	800 aa		4.99	□□□□□ -1.61
IRC13	YOR235W	URN1	Q06525	465 aa	Known RBP	4.99	□□□□□ -1.61
IRC13	YOR235W	MCM21	Q06675	368 aa		4.99	□□□□□ -1.61
IRC13	YOR235W	YLR040C	Q07988	224 aa		4.99	□□□□□ -1.61
IRC13	YOR235W	NUP145	P49687	1317 aa		4.98	□□□□□ -1.61
IRC13	YOR235W	TUB2	P02557	457 aa	Known RBP	4.98	□□□□□ -1.61
IRC13	YOR235W	LAT1	P12695	482 aa	Known RBP	4.98	□□□□□ -1.61
IRC13	YOR235W	YBR053C	P38235	358 aa		4.98	□□□□□ -1.61
IRC13	YOR235W	YHR112C	P38716	378 aa		4.98	□□□□□ -1.61
IRC13	YOR235W	RET2	P43621	546 aa		4.98	□□□□□ -1.61
IRC13	YOR235W	SUN4	P53616	420 aa		4.98	□□□□□ -1.61
IRC13	YOR235W	HMO1	Q03973	246 aa	Known RBP	4.98	□□□□□ -1.61
IRC13	YOR235W	HFD1	Q04458	532 aa		4.98	□□□□□ -1.61
IRC13	YOR235W	PUS9	Q12069	462 aa		4.98	□□□□□ -1.61
IRC13	YOR235W	ATG11	Q12527	1178 aa		4.98	□□□□□ -1.61
IRC13	YOR235W	AKL1	P38080	1108 aa	Known RBP	4.97	□□□□□ -1.61
IRC13	YOR235W	BEM4	P39011	633 aa		4.97	□□□□□ -1.61
IRC13	YOR235W	YEN1	P40028	759 aa		4.97	□□□□□ -1.61
IRC13	YOR235W	CCT5	P40413	562 aa	Known RBP	4.97	□□□□□ -1.61
IRC13	YOR235W	AIM21	P40563	679 aa		4.97	□□□□□ -1.61
IRC13	YOR235W	BAP3	P41815	604 aa		4.97	□□□□□ -1.61
IRC13	YOR235W	SET2	P46995	733 aa	Known RBP	4.97	□□□□□ -1.61
IRC13	YOR235W	MSE1	P48525	536 aa		4.97	□□□□□ -1.61
IRC13	YOR235W	GSF2	Q04697	403 aa	Known RBP	4.97	□□□□□ -1.61
IRC13	YOR235W	GAD1	Q04792	585 aa		4.97	□□□□□ -1.61
IRC13	YOR235W	YTM1	Q12024	460 aa	Predicted RBP	4.97	□□□□□ -1.61
IRC13	YOR235W	ALG7	P07286	448 aa		4.96	□□□□□ -1.62
IRC13	YOR235W	TSR4	P25040	408 aa		4.96	□□□□□ -1.62
IRC13	YOR235W	TRZ1	P36159	838 aa	Predicted RBP	4.96	□□□□□ -1.62
IRC13	YOR235W	MAL31	P38156	614 aa		4.96	□□□□□ -1.62
IRC13	YOR235W	SUL1	P38359	859 aa		4.96	□□□□□ -1.62
IRC13	YOR235W	TDA3	P38758	523 aa		4.96	□□□□□ -1.62
IRC13	YOR235W	CHS7	P38843	316 aa		4.96	□□□□□ -1.62
IRC13	YOR235W	HOS4	P40480	1083 aa		4.96	□□□□□ -1.62
IRC13	YOR235W	GZF3	P42944	551 aa	Known RBP	4.96	□□□□□ -1.62
IRC13	YOR235W	RNT1	Q02555	471 aa		4.96	□□□□□ -1.62
IRC13	YOR235W	REC102	Q02721	264 aa		4.96	□□□□□ -1.62
IRC13	YOR235W	YOL073C	Q08232	322 aa		4.96	□□□□□ -1.62
IRC13	YOR235W	FRE5	Q08908	694 aa		4.96	□□□□□ -1.62
IRC13	YOR235W	FAP7	Q12055	197 aa	Predicted RBP	4.96	□□□□□ -1.62
IRC13	YOR235W	PPR1	P07272	904 aa	Predicted RBP	4.95	□□□□□ -1.62
IRC13	YOR235W	APN2	P38207	520 aa		4.95	□□□□□ -1.62
IRC13	YOR235W	OAF1	P39720	1047 aa	Predicted RBP	4.95	□□□□□ -1.62
IRC13	YOR235W	NUG1	P40010	520 aa	Known RBP	4.95	□□□□□ -1.62
IRC13	YOR235W	GPD1	Q00055	391 aa	Known RBP	4.95	□□□□□ -1.62
IRC13	YOR235W	ECM9	Q02202	377 aa		4.95	□□□□□ -1.62
IRC13	YOR235W	ADY4	Q05955	493 aa		4.95	□□□□□ -1.62
IRC13	YOR235W	ERG6	P25087	383 aa	Known RBP	4.94	□□□□□ -1.62
IRC13	YOR235W	APT2	P36973	181 aa		4.94	□□□□□ -1.62
IRC13	YOR235W	YHR202W	P38887	602 aa		4.94	□□□□□ -1.62
IRC13	YOR235W	LYS9	P38999	446 aa		4.94	□□□□□ -1.62
IRC13	YOR235W	HXT6	P39003	570 aa	Known RBP	4.94	□□□□□ -1.62
IRC13	YOR235W	HXT7	P39004	570 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 19 ms