RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C YKR051WP36142 418 aa9.43□□□□□ -0.9
PUP1YOR157C TBS1P38114 1094 aa9.43□□□□□ -0.9
PUP1YOR157C TIF35Q04067 274 aaKnown RBP9.43□□□□□ -0.9
PUP1YOR157C PRM6Q04705 352 aa9.43□□□□□ -0.9
PUP1YOR157C YDL057WQ07379 328 aa9.43□□□□□ -0.9
PUP1YOR157C YOR296WQ08748 1289 aa9.43□□□□□ -0.9
PUP1YOR157C ASP3-2P0CX77 362 aa9.42□□□□□ -0.9
PUP1YOR157C ASP3-3P0CX78 362 aa9.42□□□□□ -0.9
PUP1YOR157C ASP3-4P0CX79 362 aa9.42□□□□□ -0.9
PUP1YOR157C ASP3-1P0CZ17 362 aa9.42□□□□□ -0.9
PUP1YOR157C PET10P36139 283 aa9.42□□□□□ -0.9
PUP1YOR157C SDS3P40505 327 aa9.42□□□□□ -0.9
PUP1YOR157C UTP14Q04500 899 aaKnown RBP9.42□□□□□ -0.9
PUP1YOR157C SAM3Q08986 587 aa9.42□□□□□ -0.9
PUP1YOR157C GET3Q12154 354 aaKnown RBP9.42□□□□□ -0.9
PUP1YOR157C HSP82P02829 709 aaKnown RBP9.41□□□□□ -0.9
PUP1YOR157C SSB1P11484 613 aaKnown RBP9.41□□□□□ -0.9
PUP1YOR157C CBP3P21560 335 aa9.41□□□□□ -0.9
PUP1YOR157C CSE1P33307 960 aa9.41□□□□□ -0.9
PUP1YOR157C AGP2P38090 596 aa9.41□□□□□ -0.9
PUP1YOR157C SSB2P40150 613 aaKnown RBP9.41□□□□□ -0.9
PUP1YOR157C NUP82P40368 713 aa9.41□□□□□ -0.9
PUP1YOR157C GCN5Q03330 439 aa9.41□□□□□ -0.9
PUP1YOR157C WAR1Q03631 944 aa9.41□□□□□ -0.9
PUP1YOR157C EIS1Q05050 843 aaKnown RBP9.41□□□□□ -0.9
PUP1YOR157C HEL2Q05580 639 aaKnown RBP9.41□□□□□ -0.9
PUP1YOR157C YLR407WQ06070 228 aa9.41□□□□□ -0.9
PUP1YOR157C TSA1P34760 196 aaKnown RBP9.4□□□□□ -0.9
PUP1YOR157C TIF5P38431 405 aaKnown RBP9.4□□□□□ -0.9
PUP1YOR157C YIR007WP40566 764 aa9.4□□□□□ -0.9
PUP1YOR157C FLC1Q08967 793 aa9.4□□□□□ -0.9
PUP1YOR157C TAF10Q12030 206 aa9.4□□□□□ -0.9
PUP1YOR157C KIN3P22209 435 aa9.39□□□□□ -0.91
PUP1YOR157C TFB1P32776 642 aa9.39□□□□□ -0.91
PUP1YOR157C SAP190P36123 1033 aa9.39□□□□□ -0.91
PUP1YOR157C UBP13P38187 747 aa9.39□□□□□ -0.91
PUP1YOR157C YDL129WQ07555 291 aa9.39□□□□□ -0.91
PUP1YOR157C DCS2Q12123 353 aa9.39□□□□□ -0.91
PUP1YOR157C NBL1Q3E7Y6 73 aa9.39□□□□□ -0.91
PUP1YOR157C ASF1P32447 279 aa9.38□□□□□ -0.91
PUP1YOR157C PPX1P38698 397 aa9.38□□□□□ -0.91
PUP1YOR157C RAD55P38953 406 aa9.38□□□□□ -0.91
PUP1YOR157C NUP60P39705 539 aa9.38□□□□□ -0.91
PUP1YOR157C YIL161WP40449 235 aaKnown RBP9.38□□□□□ -0.91
PUP1YOR157C VPS70P47161 811 aa9.38□□□□□ -0.91
PUP1YOR157C NOP13P53883 403 aaKnown RBP RIP-Chip data9.38□□□□□ -0.91not detected
PUP1YOR157C SMA1Q02651 245 aa9.38□□□□□ -0.91
PUP1YOR157C SEG1Q04279 960 aa9.38□□□□□ -0.91
PUP1YOR157C OPT2Q06593 877 aa9.38□□□□□ -0.91
PUP1YOR157C GPM2Q12008 311 aa9.38□□□□□ -0.91
PUP1YOR157C PTC5Q12511 572 aa9.38□□□□□ -0.91
PUP1YOR157C CSF1Q12150 2958 aa9.37□□□□□ -0.91
PUP1YOR157C TRL1P09880 827 aaKnown RBP9.37□□□□□ -0.91
PUP1YOR157C ALG1P16661 449 aa9.37□□□□□ -0.91
PUP1YOR157C FPR1P20081 114 aaKnown RBP9.37□□□□□ -0.91
PUP1YOR157C TKL2P33315 681 aa9.37□□□□□ -0.91
PUP1YOR157C YEL1P34225 687 aa9.37□□□□□ -0.91
PUP1YOR157C ERG10P41338 398 aaKnown RBP9.37□□□□□ -0.91
PUP1YOR157C CUE3P53137 624 aaKnown RBP9.37□□□□□ -0.91
PUP1YOR157C CKA2P19454 339 aa9.36□□□□□ -0.91
PUP1YOR157C GUT1P32190 709 aa9.36□□□□□ -0.91
PUP1YOR157C PTC3P34221 468 aaKnown RBP9.36□□□□□ -0.91
PUP1YOR157C LEU5P38702 357 aa9.36□□□□□ -0.91
PUP1YOR157C GDH3P39708 457 aa9.36□□□□□ -0.91
PUP1YOR157C BUD6P41697 788 aa9.36□□□□□ -0.91
PUP1YOR157C HSH155P49955 971 aaKnown RBP9.36□□□□□ -0.91
PUP1YOR157C YNL011CP53980 444 aa9.36□□□□□ -0.91
PUP1YOR157C CEG1Q01159 459 aaPredicted RBP9.36□□□□□ -0.91
PUP1YOR157C HPF1Q05164 967 aa9.36□□□□□ -0.91
PUP1YOR157C SGT2Q12118 346 aaKnown RBP9.36□□□□□ -0.91
PUP1YOR157C PRP8P33334 2413 aaKnown RBP9.35□□□□□ -0.91
PUP1YOR157C REV1P12689 985 aa9.35□□□□□ -0.91
PUP1YOR157C ISY1P21374 235 aaPredicted RBP9.35□□□□□ -0.91
PUP1YOR157C PPS1P38148 807 aa9.35□□□□□ -0.91
PUP1YOR157C SHE3P38272 425 aaKnown RBP9.35□□□□□ -0.91
PUP1YOR157C GGA2P38817 585 aaKnown RBP9.35□□□□□ -0.91
PUP1YOR157C UBA2P52488 636 aa9.35□□□□□ -0.91
PUP1YOR157C CUR1Q06469 252 aa9.35□□□□□ -0.91
PUP1YOR157C TSR1Q07381 788 aaKnown RBP9.35□□□□□ -0.91
PUP1YOR157C MET4P32389 672 aa9.34□□□□□ -0.91
PUP1YOR157C SCY1P53009 804 aa9.34□□□□□ -0.91
PUP1YOR157C YNR065CP53751 1116 aa9.34□□□□□ -0.91
PUP1YOR157C YCG1Q06680 1035 aa9.34□□□□□ -0.91
PUP1YOR157C MSF1P08425 469 aa9.33□□□□□ -0.92
PUP1YOR157C DAL1P32375 460 aa9.33□□□□□ -0.92
PUP1YOR157C SRX1P36077 127 aa9.33□□□□□ -0.92
PUP1YOR157C YBR225WP38321 900 aa9.33□□□□□ -0.92
PUP1YOR157C PIK1P39104 1066 aa9.33□□□□□ -0.92
PUP1YOR157C AVT2P39981 480 aa9.33□□□□□ -0.92
PUP1YOR157C BI4P03879 638 aa9.32□□□□□ -0.92
PUP1YOR157C CHS1P08004 1131 aa9.32□□□□□ -0.92
PUP1YOR157C DAL7P21826 554 aa9.32□□□□□ -0.92
PUP1YOR157C OSW5P40219 148 aa9.32□□□□□ -0.92
PUP1YOR157C YAP5P40574 245 aa9.32□□□□□ -0.92
PUP1YOR157C DUG1P43616 481 aaKnown RBP9.32□□□□□ -0.92
PUP1YOR157C RSM7P47150 247 aa9.32□□□□□ -0.92
PUP1YOR157C RTC4P53850 401 aa9.32□□□□□ -0.92
PUP1YOR157C MUB1Q03162 620 aa9.32□□□□□ -0.92
PUP1YOR157C YPL277CQ08989 487 aa9.32□□□□□ -0.92
PUP1YOR157C YPR027CQ12079 277 aa9.32□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 47.2 ms