RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C MVD1P32377 396 aaKnown RBP3.58□□□□□ -1.84
RPL40BYKR094C FMO1P38866 432 aa3.58□□□□□ -1.84
RPL40BYKR094C HRB1P38922 454 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
RPL40BYKR094C UBP6P43593 499 aaKnown RBP3.58□□□□□ -1.84
RPL40BYKR094C ERP6P53198 216 aa3.58□□□□□ -1.84
RPL40BYKR094C YBR182C-AQ8TGU6 64 aa3.58□□□□□ -1.84
RPL40BYKR094C ARE1P25628 610 aa3.57□□□□□ -1.84
RPL40BYKR094C SCT1P32784 759 aa3.57□□□□□ -1.84
RPL40BYKR094C PAC2P39937 518 aa3.57□□□□□ -1.84
RPL40BYKR094C UBC9P50623 157 aaPredicted RBP3.57□□□□□ -1.84
RPL40BYKR094C SCS3P53012 380 aa3.57□□□□□ -1.84
RPL40BYKR094C SEG1Q04279 960 aa3.57□□□□□ -1.84
RPL40BYKR094C RGC1Q06108 1083 aaKnown RBP3.57□□□□□ -1.84
RPL40BYKR094C GRX1P25373 110 aaKnown RBP3.56□□□□□ -1.84
RPL40BYKR094C PHO11P35842 467 aa3.56□□□□□ -1.84
RPL40BYKR094C PHO12P38693 467 aa3.56□□□□□ -1.84
RPL40BYKR094C LYS9P38999 446 aa3.56□□□□□ -1.84
RPL40BYKR094C ECM1P39715 212 aa3.56□□□□□ -1.84
RPL40BYKR094C SHR5P41912 237 aa3.56□□□□□ -1.84
RPL40BYKR094C ZIP2P53061 704 aa3.56□□□□□ -1.84
RPL40BYKR094C FHN1P53279 174 aa3.56□□□□□ -1.84
RPL40BYKR094C REH1Q06709 432 aa3.56□□□□□ -1.84
RPL40BYKR094C SPO75Q07798 868 aa3.56□□□□□ -1.84
RPL40BYKR094C PHR1P05066 565 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
RPL40BYKR094C YHR112CP38716 378 aa3.55□□□□□ -1.84
RPL40BYKR094C BNA3P47039 444 aaKnown RBP3.55□□□□□ -1.84
RPL40BYKR094C PRP31P49704 494 aaPredicted RBP3.55□□□□□ -1.84
RPL40BYKR094C ATG4P53867 494 aa3.55□□□□□ -1.84
RPL40BYKR094C MLH3Q12083 715 aa3.55□□□□□ -1.84
RPL40BYKR094C ERG11P10614 530 aa3.54□□□□□ -1.84
RPL40BYKR094C SPC29P33419 253 aa3.54□□□□□ -1.84
RPL40BYKR094C NUP60P39705 539 aa3.54□□□□□ -1.84
RPL40BYKR094C RLP7P40693 322 aaKnown RBP3.54□□□□□ -1.84
RPL40BYKR094C NAN1Q02931 896 aaKnown RBP3.54□□□□□ -1.84
RPL40BYKR094C CTK1Q03957 528 aaKnown RBP3.54□□□□□ -1.84
RPL40BYKR094C YDR514CQ04408 483 aa3.54□□□□□ -1.84
RPL40BYKR094C ADE2P21264 571 aaKnown RBP3.53□□□□□ -1.84
RPL40BYKR094C CCR4P31384 837 aaKnown RBP3.53□□□□□ -1.84
RPL40BYKR094C MUP3P38734 546 aa3.53□□□□□ -1.84
RPL40BYKR094C HXT16P47185 567 aa3.53□□□□□ -1.84
RPL40BYKR094C MRK1P50873 501 aa3.53□□□□□ -1.84
RPL40BYKR094C YBP2P53169 641 aa3.53□□□□□ -1.84
RPL40BYKR094C MET7Q08645 548 aa3.53□□□□□ -1.84
RPL40BYKR094C USV1Q12132 391 aa3.53□□□□□ -1.84
RPL40BYKR094C DIF1O13577 133 aa3.52□□□□□ -1.85
RPL40BYKR094C TOM70P07213 617 aaKnown RBP3.52□□□□□ -1.85
RPL40BYKR094C PTP1P25044 335 aa3.52□□□□□ -1.85
RPL40BYKR094C ERG6P25087 383 aaKnown RBP3.52□□□□□ -1.85
RPL40BYKR094C SSF2Q12153 453 aaPredicted RBP3.52□□□□□ -1.85
RPL40BYKR094C RGT2Q12300 763 aa3.52□□□□□ -1.85
RPL40BYKR094C OSH2Q12451 1283 aa3.52□□□□□ -1.85
RPL40BYKR094C HRP1Q99383 534 aaKnown RBP3.52□□□□□ -1.85
RPL40BYKR094C THR1P17423 357 aaKnown RBP3.51□□□□□ -1.85
RPL40BYKR094C HSP60P19882 572 aaKnown RBP3.51□□□□□ -1.85
RPL40BYKR094C PER1P25625 357 aa3.51□□□□□ -1.85
RPL40BYKR094C XBP1P40489 647 aa3.51□□□□□ -1.85
RPL40BYKR094C ALG2P43636 503 aa3.51□□□□□ -1.85
RPL40BYKR094C YDR338CQ05497 695 aa3.51□□□□□ -1.85
RPL40BYKR094C YDL124WQ07551 312 aaKnown RBP3.51□□□□□ -1.85
RPL40BYKR094C APL2P36000 726 aaPredicted RBP3.5□□□□□ -1.85
RPL40BYKR094C SET3P36124 751 aa3.5□□□□□ -1.85
RPL40BYKR094C NET1P47035 1189 aa3.5□□□□□ -1.85
RPL40BYKR094C ZDS1P50111 915 aaKnown RBP3.5□□□□□ -1.85
RPL40BYKR094C ARG5,6Q01217 863 aa3.5□□□□□ -1.85
RPL40BYKR094C ATP25Q03153 612 aa3.5□□□□□ -1.85
RPL40BYKR094C TAF8Q03750 510 aa3.5□□□□□ -1.85
RPL40BYKR094C CIT1P00890 479 aa3.49□□□□□ -1.85
RPL40BYKR094C RAD4P14736 754 aa3.49□□□□□ -1.85
RPL40BYKR094C NUP1P20676 1076 aa3.49□□□□□ -1.85
RPL40BYKR094C FUB1P25659 250 aa3.49□□□□□ -1.85
RPL40BYKR094C BET3P36149 193 aa3.49□□□□□ -1.85
RPL40BYKR094C TRZ1P36159 838 aaPredicted RBP3.49□□□□□ -1.85
RPL40BYKR094C LTP1P40347 161 aa3.49□□□□□ -1.85
RPL40BYKR094C TY4A-JP47023 414 aa3.49□□□□□ -1.85
RPL40BYKR094C BPL1P48445 690 aaPredicted RBP3.49□□□□□ -1.85
RPL40BYKR094C SLK19Q08581 821 aaKnown RBP3.49□□□□□ -1.85
RPL40BYKR094C WRS1Q12109 432 aaKnown RBP3.49□□□□□ -1.85
RPL40BYKR094C ZRT2Q12436 422 aa3.49□□□□□ -1.85
RPL40BYKR094C YLR149CQ99296 730 aa3.49□□□□□ -1.85
RPL40BYKR094C STE12P13574 688 aa3.48□□□□□ -1.85
RPL40BYKR094C RPA135P22138 1203 aaKnown RBP3.48□□□□□ -1.85
RPL40BYKR094C GMH1P36125 273 aa3.48□□□□□ -1.85
RPL40BYKR094C GET2P40056 285 aa3.48□□□□□ -1.85
RPL40BYKR094C ALY2P47029 1046 aa3.48□□□□□ -1.85
RPL40BYKR094C YGR125WP53273 1036 aa3.48□□□□□ -1.85
RPL40BYKR094C MPS1P54199 764 aa3.48□□□□□ -1.85
RPL40BYKR094C FMP30Q02883 468 aa3.48□□□□□ -1.85
RPL40BYKR094C PGK1P00560 416 aaKnown RBP3.47□□□□□ -1.85
RPL40BYKR094C YUR1P26725 428 aa3.47□□□□□ -1.85
RPL40BYKR094C APT2P36973 181 aa3.47□□□□□ -1.85
RPL40BYKR094C MCM21Q06675 368 aa3.47□□□□□ -1.85
RPL40BYKR094C KCC4P25389 1037 aa3.46□□□□□ -1.86
RPL40BYKR094C HUL4P40985 892 aa3.46□□□□□ -1.86
RPL40BYKR094C CRP1P38845 465 aaKnown RBP3.45□□□□□ -1.86
RPL40BYKR094C TIM54P47045 478 aa3.45□□□□□ -1.86
RPL40BYKR094C RTA1P53047 317 aa3.45□□□□□ -1.86
RPL40BYKR094C ORC4P54791 529 aa3.45□□□□□ -1.86
RPL40BYKR094C CIR2Q08822 631 aa3.45□□□□□ -1.86
RPL40BYKR094C Q0142Q9ZZW4 58 aa3.45□□□□□ -1.86
RPL40BYKR094C RNR1P21524 888 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms