RNA–Protein interactions for RNA: YGR041W

BUD9, Transcript of Protein involved in bud-site selection, yeast

Gene BUD9, Length 1,644 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD9	YGR041W	UBP15	P50101	1230 aa		7.16	□□□□□ -1.26
BUD9	YGR041W	UBC9	P50623	157 aa	Predicted RBP	7.16	□□□□□ -1.26
BUD9	YGR041W	RBG2	P53295	368 aa	Known RBP	7.16	□□□□□ -1.26
BUD9	YGR041W	YLR287C	Q05881	355 aa		7.16	□□□□□ -1.26
BUD9	YGR041W	RPS21B	Q3E754	87 aa	Known RBP	7.16	□□□□□ -1.26
BUD9	YGR041W	GCN2	P15442	1659 aa		7.16	□□□□□ -1.26
BUD9	YGR041W	DLD1	P32891	587 aa		7.16	□□□□□ -1.26
BUD9	YGR041W	MRPL16	P38064	232 aa		7.16	□□□□□ -1.26
BUD9	YGR041W	MXR1	P40029	184 aa		7.16	□□□□□ -1.26
BUD9	YGR041W	GPD2	P41911	440 aa	Known RBP	7.16	□□□□□ -1.26
BUD9	YGR041W	MSB3	P48566	633 aa	Predicted RBP	7.16	□□□□□ -1.26
BUD9	YGR041W	NUR1	Q12066	484 aa		7.16	□□□□□ -1.26
BUD9	YGR041W	ARP7	Q12406	477 aa		7.16	□□□□□ -1.26
BUD9	YGR041W	CDC4	P07834	779 aa		7.15	□□□□□ -1.27
BUD9	YGR041W	AAC3	P18238	307 aa		7.15	□□□□□ -1.27
BUD9	YGR041W	PRO1	P32264	428 aa		7.15	□□□□□ -1.27
BUD9	YGR041W	SLC1	P33333	303 aa		7.15	□□□□□ -1.27
BUD9	YGR041W	YKR078W	P36158	585 aa	Known RBP	7.15	□□□□□ -1.27
BUD9	YGR041W	CCZ1	P38273	704 aa		7.15	□□□□□ -1.27
BUD9	YGR041W	SBE2	P42223	864 aa	Known RBP	7.15	□□□□□ -1.27
BUD9	YGR041W	GUP1	P53154	560 aa		7.15	□□□□□ -1.27
BUD9	YGR041W	TIM50	Q02776	476 aa		7.15	□□□□□ -1.27
BUD9	YGR041W	TDA9	Q04545	1251 aa		7.15	□□□□□ -1.27
BUD9	YGR041W	HRQ1	Q05549	1077 aa		7.15	□□□□□ -1.27
BUD9	YGR041W	IRC3	Q06683	689 aa		7.15	□□□□□ -1.27
BUD9	YGR041W	RLP24	Q07915	199 aa	Known RBP	7.15	□□□□□ -1.27
BUD9	YGR041W	ACM1	Q08981	209 aa		7.15	□□□□□ -1.27
BUD9	YGR041W	MET32	Q12041	191 aa		7.15	□□□□□ -1.27
BUD9	YGR041W	DPH6	Q12429	685 aa		7.15	□□□□□ -1.27
BUD9	YGR041W	HSH49	Q99181	213 aa	Predicted RBP	7.15	□□□□□ -1.27
BUD9	YGR041W	GDB1	Q06625	1536 aa		7.14	□□□□□ -1.27
BUD9	YGR041W	PHO3	P24031	467 aa		7.14	□□□□□ -1.27
BUD9	YGR041W	CMK1	P27466	446 aa	Known RBP	7.14	□□□□□ -1.27
BUD9	YGR041W	DHR2	P36009	735 aa	Predicted RBP	7.14	□□□□□ -1.27
BUD9	YGR041W	REI1	P38344	393 aa	Predicted RBP	7.14	□□□□□ -1.27
BUD9	YGR041W	TSL1	P38427	1098 aa	Known RBP	7.14	□□□□□ -1.27
BUD9	YGR041W	GCV1	P48015	400 aa		7.14	□□□□□ -1.27
BUD9	YGR041W	YGR016W	P53209	190 aa		7.14	□□□□□ -1.27
BUD9	YGR041W	ENV11	P53246	860 aa		7.14	□□□□□ -1.27
BUD9	YGR041W	CWC22	P53333	577 aa	Known RBP	7.14	□□□□□ -1.27
BUD9	YGR041W	OMS1	Q06668	471 aa		7.14	□□□□□ -1.27
BUD9	YGR041W	TAH18	Q12181	623 aa		7.14	□□□□□ -1.27
BUD9	YGR041W	PUS1	Q12211	544 aa	Known RBP	7.14	□□□□□ -1.27
BUD9	YGR041W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	7.14	□□□□□ -1.27	not detected
BUD9	YGR041W	RPO21	P04050	1733 aa	Known RBP	7.14	□□□□□ -1.27
BUD9	YGR041W	NAM7	P30771	971 aa	Known RBP	7.13	□□□□□ -1.27
BUD9	YGR041W	ECM32	P32644	1121 aa	Known RBP	7.13	□□□□□ -1.27
BUD9	YGR041W	PRS1	P32895	427 aa	Known RBP	7.13	□□□□□ -1.27
BUD9	YGR041W	SAS3	P34218	831 aa		7.13	□□□□□ -1.27
BUD9	YGR041W	APM3	P38153	483 aa		7.13	□□□□□ -1.27
BUD9	YGR041W	HXT16	P47185	567 aa		7.13	□□□□□ -1.27
BUD9	YGR041W	PCL10	P53124	433 aa		7.13	□□□□□ -1.27
BUD9	YGR041W	MRPL19	P53875	158 aa		7.13	□□□□□ -1.27
BUD9	YGR041W	ARA2	Q04212	335 aa		7.13	□□□□□ -1.27
BUD9	YGR041W	YKU80	Q04437	629 aa		7.13	□□□□□ -1.27
BUD9	YGR041W	ARO1	P08566	1588 aa	Known RBP	7.13	□□□□□ -1.27
BUD9	YGR041W	NTE1	Q04958	1679 aa		7.13	□□□□□ -1.27
BUD9	YGR041W	CYB2	P00175	591 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	SEC65	P29478	273 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	RAD16	P31244	790 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	RPT3	P33298	428 aa	Known RBP	7.12	□□□□□ -1.27
BUD9	YGR041W	SLA2	P33338	968 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	YKL151C	P36059	337 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	CAJ1	P39101	391 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	FKH1	P40466	484 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	YIL092W	P40497	633 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	GYP7	P48365	746 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	ARC35	P53731	342 aa	Known RBP	7.12	□□□□□ -1.27
BUD9	YGR041W	TAF11	Q04226	346 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	PSR1	Q07800	427 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	RRG1	Q12167	365 aa	Predicted RBP	7.12	□□□□□ -1.27
BUD9	YGR041W	PDR5	P33302	1511 aa	Known RBP	7.12	□□□□□ -1.27
BUD9	YGR041W	TRK1	P12685	1235 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	SPO16	P17122	198 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	DAL7	P21826	554 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	CDC48	P25694	835 aa	Known RBP	7.12	□□□□□ -1.27
BUD9	YGR041W	KIP1	P28742	1111 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	SDS22	P36047	338 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	FAT1	P38225	669 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	QNS1	P38795	714 aa	Known RBP	7.12	□□□□□ -1.27
BUD9	YGR041W	VHR1	P40522	640 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	LEM3	P42838	414 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	MRPL13	Q02204	264 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	NSE5	Q03718	556 aa		7.12	□□□□□ -1.27
BUD9	YGR041W	RPA190	P10964	1664 aa	Known RBP	7.11	□□□□□ -1.27
BUD9	YGR041W	ATP12	P22135	325 aa		7.11	□□□□□ -1.27
BUD9	YGR041W	ABZ1	P37254	787 aa	Predicted RBP	7.11	□□□□□ -1.27
BUD9	YGR041W	SPC72	P39723	622 aa		7.11	□□□□□ -1.27
BUD9	YGR041W	YEL068C	P39977	110 aa		7.11	□□□□□ -1.27
BUD9	YGR041W	YER158C	P40095	573 aa		7.11	□□□□□ -1.27
BUD9	YGR041W	RIC1	P40395	1056 aa		7.11	□□□□□ -1.27
BUD9	YGR041W	IRC6	P43615	237 aa		7.11	□□□□□ -1.27
BUD9	YGR041W	YAP1802	P53309	568 aa		7.11	□□□□□ -1.27
BUD9	YGR041W	AVO1	Q08236	1176 aa		7.11	□□□□□ -1.27
BUD9	YGR041W	YLL058W	Q12198	575 aa		7.11	□□□□□ -1.27
BUD9	YGR041W	SEM1	O94742	89 aa		7.1	□□□□□ -1.27
BUD9	YGR041W	MTF2	P10849	440 aa		7.1	□□□□□ -1.27
BUD9	YGR041W	YCL049C	P25577	312 aa		7.1	□□□□□ -1.27
BUD9	YGR041W	KRR1	P25586	316 aa	Predicted RBP	7.1	□□□□□ -1.27
BUD9	YGR041W	BRF1	P29056	596 aa		7.1	□□□□□ -1.27

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms