RNA–Protein interactions for RNA: ENST00000640654.1

RTTN-220, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-220ENST00000640654 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.28□□□□□ -1.24
RTTN-220ENST00000640654 XYLBO75191 536 aa7.27□□□□□ -1.25
RTTN-220ENST00000640654 EGFRP00533 1210 aa7.27□□□□□ -1.25
RTTN-220ENST00000640654 SETDB1Q15047 1291 aa7.27□□□□□ -1.25
RTTN-220ENST00000640654 UVSSAQ2YD98 709 aa7.27□□□□□ -1.25
RTTN-220ENST00000640654 C11orf91Q3C1V1 193 aa7.27□□□□□ -1.25
RTTN-220ENST00000640654 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.27□□□□□ -1.25
RTTN-220ENST00000640654 NSUN5Q96P11 429 aaKnown RBP7.27□□□□□ -1.25
RTTN-220ENST00000640654 RTCBQ9Y3I0 505 aaKnown RBP7.27□□□□□ -1.25
RTTN-220ENST00000640654 CCDC88BA6NC98 1476 aa7.26□□□□□ -1.25
RTTN-220ENST00000640654 J3QW42 95 aa7.26□□□□□ -1.25
RTTN-220ENST00000640654 FOXO3O43524 673 aa7.26□□□□□ -1.25
RTTN-220ENST00000640654 MED26O95402 600 aa7.26□□□□□ -1.25
RTTN-220ENST00000640654 CMTR1Q8N1G2 835 aaKnown RBP7.26□□□□□ -1.25
RTTN-220ENST00000640654 PPME1Q9Y570 386 aa7.26□□□□□ -1.25
RTTN-220ENST00000640654 SMARCA2P51531 1590 aa7.25□□□□□ -1.25
RTTN-220ENST00000640654 LGR5O75473 907 aa7.25□□□□□ -1.25
RTTN-220ENST00000640654 SOX18P35713 384 aa7.25□□□□□ -1.25
RTTN-220ENST00000640654 NFIAQ12857 509 aa7.25□□□□□ -1.25
RTTN-220ENST00000640654 DPYDQ12882 1025 aa7.25□□□□□ -1.25
RTTN-220ENST00000640654 UTP4Q969X6 686 aaKnown RBP7.25□□□□□ -1.25
RTTN-220ENST00000640654 QTRT2Q9H974 415 aaKnown RBP7.25□□□□□ -1.25
RTTN-220ENST00000640654 ACAD11Q709F0 780 aa7.24□□□□□ -1.25
RTTN-220ENST00000640654 ZDHHC13Q8IUH4 622 aa7.24□□□□□ -1.25
RTTN-220ENST00000640654 RGL4Q8IZJ4 473 aa7.24□□□□□ -1.25
RTTN-220ENST00000640654 MYO19Q96H55 970 aa7.24□□□□□ -1.25
RTTN-220ENST00000640654 DBNDD2Q9BQY9 259 aa7.24□□□□□ -1.25
RTTN-220ENST00000640654 MAFBQ9Y5Q3 323 aaPredicted RBP7.24□□□□□ -1.25
RTTN-220ENST00000640654 MMP20O60882 483 aa7.23□□□□□ -1.25
RTTN-220ENST00000640654 HOXD8P13378 290 aaPredicted RBP7.23□□□□□ -1.25
RTTN-220ENST00000640654 SPINK2P20155 84 aa7.23□□□□□ -1.25
RTTN-220ENST00000640654 FLIIQ13045 1269 aa7.23□□□□□ -1.25
RTTN-220ENST00000640654 FZD5Q13467 585 aa7.23□□□□□ -1.25
RTTN-220ENST00000640654 UBL7Q96S82 380 aaPredicted RBP7.23□□□□□ -1.25
RTTN-220ENST00000640654 TFIP11Q9UBB9 837 aaKnown RBP7.23□□□□□ -1.25
RTTN-220ENST00000640654 TRIM33Q9UPN9 1127 aa7.23□□□□□ -1.25
RTTN-220ENST00000640654 ABCC8Q09428 1581 aa7.23□□□□□ -1.25
RTTN-220ENST00000640654 WNT11O96014 354 aa7.22□□□□□ -1.25
RTTN-220ENST00000640654 PTK7Q13308 1070 aa7.22□□□□□ -1.25
RTTN-220ENST00000640654 RNF43Q68DV7 783 aa7.22□□□□□ -1.25
RTTN-220ENST00000640654 USP20Q9Y2K6 914 aa7.22□□□□□ -1.25
RTTN-220ENST00000640654 FAM177BA6PVY3 158 aa7.21□□□□□ -1.26
RTTN-220ENST00000640654 USP17L15C9J2P7 530 aa7.21□□□□□ -1.26
RTTN-220ENST00000640654 USP17L10C9JJH3 530 aa7.21□□□□□ -1.26
RTTN-220ENST00000640654 USP17L13C9JLJ4 530 aa7.21□□□□□ -1.26
RTTN-220ENST00000640654 USP17L12C9JPN9 530 aa7.21□□□□□ -1.26
RTTN-220ENST00000640654 USP17L11C9JVI0 530 aa7.21□□□□□ -1.26
RTTN-220ENST00000640654 USP17L21D6R901 530 aa7.21□□□□□ -1.26
RTTN-220ENST00000640654 USP17L18D6R9N7 530 aa7.21□□□□□ -1.26
RTTN-220ENST00000640654 USP17L22D6RA61 530 aa7.21□□□□□ -1.26
RTTN-220ENST00000640654 USP17L17D6RBQ6 530 aa7.21□□□□□ -1.26
RTTN-220ENST00000640654 USP17L19D6RCP7 530 aa7.21□□□□□ -1.26
RTTN-220ENST00000640654 USP17L20D6RJB6 530 aa7.21□□□□□ -1.26
RTTN-220ENST00000640654 OPLAHO14841 1288 aa7.21□□□□□ -1.26
RTTN-220ENST00000640654 CD68P34810 354 aaPredicted RBP7.21□□□□□ -1.26
RTTN-220ENST00000640654 USP17L24Q0WX57 530 aa7.21□□□□□ -1.26
RTTN-220ENST00000640654 CRTC2Q53ET0 693 aaPredicted RBP7.21□□□□□ -1.26
RTTN-220ENST00000640654 FAM117BQ6P1L5 589 aa7.21□□□□□ -1.26
RTTN-220ENST00000640654 TREML1Q86YW5 311 aa7.21□□□□□ -1.26
RTTN-220ENST00000640654 ANKMY2Q8IV38 441 aa7.21□□□□□ -1.26
RTTN-220ENST00000640654 ARMC10Q8N2F6 343 aa7.21□□□□□ -1.26
RTTN-220ENST00000640654 SPACA7Q96KW9 195 aa7.21□□□□□ -1.26
RTTN-220ENST00000640654 C7orf69Q9H7B7 122 aa7.21□□□□□ -1.26
RTTN-220ENST00000640654 FAM196BA6NMK8 535 aa7.2□□□□□ -1.26
RTTN-220ENST00000640654 LINC01387J3KSC0 135 aa7.2□□□□□ -1.26
RTTN-220ENST00000640654 SMNDC1O75940 238 aaKnown RBP eCLIP7.2□□□□□ -1.26
RTTN-220ENST00000640654 TPRNQ4KMQ1 711 aa7.2□□□□□ -1.26
RTTN-220ENST00000640654 DTX1Q86Y01 620 aa7.2□□□□□ -1.26
RTTN-220ENST00000640654 TRIM42Q8IWZ5 723 aa7.2□□□□□ -1.26
RTTN-220ENST00000640654 BICRAQ9NZM4 1560 aa7.2□□□□□ -1.26
RTTN-220ENST00000640654 SART1O43290 800 aaKnown RBP7.19□□□□□ -1.26
RTTN-220ENST00000640654 DUOXA2Q1HG44 320 aa7.19□□□□□ -1.26
RTTN-220ENST00000640654 NLRP13Q86W25 1043 aa7.19□□□□□ -1.26
RTTN-220ENST00000640654 GLMNQ92990 594 aa7.19□□□□□ -1.26
RTTN-220ENST00000640654 MYRFLQ96LU7 910 aa7.19□□□□□ -1.26
RTTN-220ENST00000640654 HMX2A2RU54 273 aa7.18□□□□□ -1.26
RTTN-220ENST00000640654 WISP1O95388 367 aa7.18□□□□□ -1.26
RTTN-220ENST00000640654 CDC27P30260 824 aa7.18□□□□□ -1.26
RTTN-220ENST00000640654 WEE1P30291 646 aa7.18□□□□□ -1.26
RTTN-220ENST00000640654 KLHL23Q8NBE8 558 aa7.18□□□□□ -1.26
RTTN-220ENST00000640654 GALNT11Q8NCW6 608 aa7.18□□□□□ -1.26
RTTN-220ENST00000640654 FAM46AQ96IP4 442 aaKnown RBP7.18□□□□□ -1.26
RTTN-220ENST00000640654 LACRTQ9GZZ8 138 aa7.18□□□□□ -1.26
RTTN-220ENST00000640654 KCNMB2Q9Y691 235 aa7.18□□□□□ -1.26
RTTN-220ENST00000640654 HYAL2Q12891 473 aa7.17□□□□□ -1.26
RTTN-220ENST00000640654 LCE1DQ5T752 114 aa7.17□□□□□ -1.26
RTTN-220ENST00000640654 CEP135Q66GS9 1140 aa7.17□□□□□ -1.26
RTTN-220ENST00000640654 TXNDC11Q6PKC3 985 aa7.17□□□□□ -1.26
RTTN-220ENST00000640654 CLEC10AQ8IUN9 316 aa7.17□□□□□ -1.26
RTTN-220ENST00000640654 GIMAP7Q8NHV1 300 aa7.17□□□□□ -1.26
RTTN-220ENST00000640654 KCNF1Q9H3M0 494 aa7.17□□□□□ -1.26
RTTN-220ENST00000640654 VRTNQ9H8Y1 702 aa7.17□□□□□ -1.26
RTTN-220ENST00000640654 FAM13BQ9NYF5 915 aa7.17□□□□□ -1.26
RTTN-220ENST00000640654 SOGA1O94964 1423 aa7.17□□□□□ -1.26
RTTN-220ENST00000640654 PRR19A6NJB7 356 aa7.16□□□□□ -1.26
RTTN-220ENST00000640654 ADAMTS4O75173 837 aa7.16□□□□□ -1.26
RTTN-220ENST00000640654 LRFN2Q9ULH4 789 aa7.16□□□□□ -1.26
RTTN-220ENST00000640654 ANGEL1Q9UNK9 670 aaKnown RBP7.16□□□□□ -1.26
RTTN-220ENST00000640654 FSCN2O14926 492 aa7.15□□□□□ -1.26
RTTN-220ENST00000640654 CDC25BP30305 580 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms