RNA–Protein interactions for RNA: ENST00000640525.1

RTTN-219, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-219ENST00000640525 CAMKK2Q96RR4 588 aa6.53□□□□□ -1.36
RTTN-219ENST00000640525 MEIS3Q99687 375 aa6.53□□□□□ -1.36
RTTN-219ENST00000640525 SRCIN1Q9C0H9 1055 aa6.53□□□□□ -1.36
RTTN-219ENST00000640525 VPS9D1Q9Y2B5 631 aa6.53□□□□□ -1.36
RTTN-219ENST00000640525 C4BP0C0L5 1744 aa6.53□□□□□ -1.36
RTTN-219ENST00000640525 COL15A1P39059 1388 aa6.53□□□□□ -1.36
RTTN-219ENST00000640525 TAF1LQ8IZX4 1826 aa6.53□□□□□ -1.36
RTTN-219ENST00000640525 MAP3K15Q6ZN16 1313 aa6.53□□□□□ -1.36
RTTN-219ENST00000640525 FAM177BA6PVY3 158 aa6.53□□□□□ -1.36
RTTN-219ENST00000640525 ZBTB7BO15156 539 aaPredicted RBP6.53□□□□□ -1.36
RTTN-219ENST00000640525 RPS6KA4O75676 772 aa6.53□□□□□ -1.36
RTTN-219ENST00000640525 BAG6P46379 1132 aa6.53□□□□□ -1.36
RTTN-219ENST00000640525 CCT4P50991 539 aaKnown RBP6.53□□□□□ -1.36
RTTN-219ENST00000640525 PDE4DQ08499 809 aa6.53□□□□□ -1.36
RTTN-219ENST00000640525 RC3H1Q5TC82 1133 aaKnown RBP6.53□□□□□ -1.36
RTTN-219ENST00000640525 PXYLP1Q8TE99 480 aa6.53□□□□□ -1.36
RTTN-219ENST00000640525 METTL22Q9BUU2 404 aaPredicted RBP6.53□□□□□ -1.36
RTTN-219ENST00000640525 DDX19BQ9UMR2 479 aa6.53□□□□□ -1.36
RTTN-219ENST00000640525 RTCBQ9Y3I0 505 aaKnown RBP6.53□□□□□ -1.36
RTTN-219ENST00000640525 CICQ96RK0 1608 aaPredicted RBP6.52□□□□□ -1.36
RTTN-219ENST00000640525 CACNA1FO60840 1977 aa6.52□□□□□ -1.37
RTTN-219ENST00000640525 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.52□□□□□ -1.37
RTTN-219ENST00000640525 CAMTA2O94983 1202 aa6.52□□□□□ -1.37
RTTN-219ENST00000640525 NEXNQ0ZGT2 675 aa6.52□□□□□ -1.37
RTTN-219ENST00000640525 USPL1Q5W0Q7 1092 aa6.52□□□□□ -1.37
RTTN-219ENST00000640525 BICDL1Q6ZP65 573 aa6.52□□□□□ -1.37
RTTN-219ENST00000640525 TATDN2Q93075 761 aa6.52□□□□□ -1.37
RTTN-219ENST00000640525 TFCP2L1Q9NZI6 479 aa6.52□□□□□ -1.37
RTTN-219ENST00000640525 PNMA3Q9UL41 463 aa6.52□□□□□ -1.37
RTTN-219ENST00000640525 ZNF831Q5JPB2 1677 aa6.52□□□□□ -1.37
RTTN-219ENST00000640525 RREB1Q92766 1687 aa6.52□□□□□ -1.37
RTTN-219ENST00000640525 ARFGEF2Q9Y6D5 1785 aa6.52□□□□□ -1.37
RTTN-219ENST00000640525 NEURL1BA8MQ27 555 aa6.52□□□□□ -1.37
RTTN-219ENST00000640525 NBPF7P0C2Y1 421 aaPredicted RBP6.52□□□□□ -1.37
RTTN-219ENST00000640525 LSM11P83369 360 aaKnown RBP eCLIP6.52□□□□□ -1.37
RTTN-219ENST00000640525 TRAPPC3LQ5T215 181 aa6.52□□□□□ -1.37
RTTN-219ENST00000640525 PARP9Q8IXQ6 854 aa6.52□□□□□ -1.37
RTTN-219ENST00000640525 USP44Q9H0E7 712 aa6.52□□□□□ -1.37
RTTN-219ENST00000640525 PCDHB15Q9Y5E8 787 aa6.52□□□□□ -1.37
RTTN-219ENST00000640525 NUP188Q5SRE5 1749 aa6.51□□□□□ -1.37
RTTN-219ENST00000640525 RFC4P35249 363 aa6.51□□□□□ -1.37
RTTN-219ENST00000640525 MDM2Q00987 491 aaPredicted RBP6.51□□□□□ -1.37
RTTN-219ENST00000640525 TCIRG1Q13488 830 aa6.51□□□□□ -1.37
RTTN-219ENST00000640525 GIGYF2Q6Y7W6 1299 aaKnown RBP6.51□□□□□ -1.37
RTTN-219ENST00000640525 SYNE4Q8N205 404 aa6.51□□□□□ -1.37
RTTN-219ENST00000640525 LINS1Q8NG48 757 aa6.51□□□□□ -1.37
RTTN-219ENST00000640525 ZBTB40Q9NUA8 1239 aa6.51□□□□□ -1.37
RTTN-219ENST00000640525 PPP4R2Q9NY27 417 aa6.51□□□□□ -1.37
RTTN-219ENST00000640525 C9orf78Q9NZ63 289 aaPredicted RBP6.51□□□□□ -1.37
RTTN-219ENST00000640525 A0A087WZG4 1122 aa6.5□□□□□ -1.37
RTTN-219ENST00000640525 BHMG1C9JSJ3 638 aaPredicted RBP6.5□□□□□ -1.37
RTTN-219ENST00000640525 ZPR1O75312 459 aa6.5□□□□□ -1.37
RTTN-219ENST00000640525 ALDH1L1O75891 902 aa6.5□□□□□ -1.37
RTTN-219ENST00000640525 GCKRQ14397 625 aa6.5□□□□□ -1.37
RTTN-219ENST00000640525 COL23A1Q86Y22 540 aaPredicted RBP6.5□□□□□ -1.37
RTTN-219ENST00000640525 CCDC136Q96JN2 1154 aa6.5□□□□□ -1.37
RTTN-219ENST00000640525 LRRFIP2Q9Y608 721 aaKnown RBP6.5□□□□□ -1.37
RTTN-219ENST00000640525 PXDNLA1KZ92 1463 aa6.5□□□□□ -1.37
RTTN-219ENST00000640525 ATP10DQ9P241 1426 aa6.5□□□□□ -1.37
RTTN-219ENST00000640525 ERVV-1B6SEH8 477 aa6.5□□□□□ -1.37
RTTN-219ENST00000640525 UBTFL1P0CB47 393 aaPredicted RBP6.5□□□□□ -1.37
RTTN-219ENST00000640525 TBC1D9BQ66K14 1250 aa6.5□□□□□ -1.37
RTTN-219ENST00000640525 ADGRD1Q6QNK2 874 aa6.5□□□□□ -1.37
RTTN-219ENST00000640525 UBE3BQ7Z3V4 1068 aa6.5□□□□□ -1.37
RTTN-219ENST00000640525 CCDC24Q8N4L8 307 aa6.5□□□□□ -1.37
RTTN-219ENST00000640525 FAM89AQ96GI7 184 aa6.5□□□□□ -1.37
RTTN-219ENST00000640525 ISCA1Q9BUE6 129 aa6.5□□□□□ -1.37
RTTN-219ENST00000640525 PDGFDQ9GZP0 370 aaPredicted RBP6.5□□□□□ -1.37
RTTN-219ENST00000640525 CWC25Q9NXE8 425 aaPredicted RBP6.5□□□□□ -1.37
RTTN-219ENST00000640525 NARFQ9UHQ1 456 aa6.5□□□□□ -1.37
RTTN-219ENST00000640525 NIP7Q9Y221 180 aaKnown RBP eCLIP6.5□□□□□ -1.37
RTTN-219ENST00000640525 UBN2Q6ZU65 1347 aa6.5□□□□□ -1.37
RTTN-219ENST00000640525 AFDNP55196 1824 aaKnown RBP6.49□□□□□ -1.37
RTTN-219ENST00000640525 RCCD1A6NED2 376 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 GRM8O00222 908 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 IGHDP01880 384 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 SLC15A2Q16348 729 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 SUSD4Q5VX71 490 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 MSL1Q68DK7 614 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 NLRP10Q86W26 655 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 ZNF34Q8IZ26 560 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 SUCLG2Q96I99 432 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 STK32BQ9NY57 414 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 UBR3Q6ZT12 1888 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 PNPLA7Q6ZV29 1317 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 USP42Q9H9J4 1324 aaKnown RBP6.49□□□□□ -1.37
RTTN-219ENST00000640525 HRO43593 1189 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 GNAI2P04899 355 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 GNAI3P08754 354 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 SSFA2P28290 1259 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 HSP90AB3PQ58FF7 597 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 EPHA10Q5JZY3 1008 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 NUTM1Q86Y26 1132 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 CCDC85AQ96PX6 553 aaPredicted RBP6.49□□□□□ -1.37
RTTN-219ENST00000640525 FAM117AQ9C073 453 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 BCL11AQ9H165 835 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 KDM4CQ9H3R0 1056 aa6.49□□□□□ -1.37
RTTN-219ENST00000640525 RBM27Q9P2N5 1060 aaKnown RBP6.49□□□□□ -1.37
RTTN-219ENST00000640525 NUP98P52948 1817 aa6.48□□□□□ -1.37
RTTN-219ENST00000640525 C4AP0C0L4 1744 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms