RNA–Protein interactions for RNA: ENST00000640481.1

NECAP1-226, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,216 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-226ENST00000640481 CTSWP56202 376 aa8.11□□□□□ -1.11
NECAP1-226ENST00000640481 FKBP4Q02790 459 aaKnown RBP eCLIP8.11□□□□□ -1.11
NECAP1-226ENST00000640481 AKAP2Q9Y2D5 859 aa8.11□□□□□ -1.11
NECAP1-226ENST00000640481 RIPOR2Q9Y4F9 1068 aa8.11□□□□□ -1.11
NECAP1-226ENST00000640481 ZNF609O15014 1411 aa8.11□□□□□ -1.11
NECAP1-226ENST00000640481 SLIT2O94813 1529 aa8.1□□□□□ -1.11
NECAP1-226ENST00000640481 ANKRD18BA2A2Z9 1011 aa8.1□□□□□ -1.11
NECAP1-226ENST00000640481 DTNBO60941 627 aa8.1□□□□□ -1.11
NECAP1-226ENST00000640481 PSMA5P28066 241 aa8.1□□□□□ -1.11
NECAP1-226ENST00000640481 CCDC158Q5M9N0 1113 aa8.1□□□□□ -1.11
NECAP1-226ENST00000640481 TCEANC2Q96MN5 208 aa8.1□□□□□ -1.11
NECAP1-226ENST00000640481 DDX49Q9Y6V7 483 aaKnown RBP8.1□□□□□ -1.11
NECAP1-226ENST00000640481 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.1□□□□□ -1.11
NECAP1-226ENST00000640481 PDE8AO60658 829 aa8.1□□□□□ -1.11
NECAP1-226ENST00000640481 METTL24Q5JXM2 366 aa8.1□□□□□ -1.11
NECAP1-226ENST00000640481 CNNM1Q9NRU3 951 aa8.1□□□□□ -1.11
NECAP1-226ENST00000640481 LMBRD1Q9NUN5 540 aa8.1□□□□□ -1.11
NECAP1-226ENST00000640481 NRAPQ86VF7 1730 aa8.1□□□□□ -1.11
NECAP1-226ENST00000640481 GOLGA6L3A6NEY3 463 aa8.1□□□□□ -1.11
NECAP1-226ENST00000640481 PRPF40AO75400 957 aaKnown RBP8.1□□□□□ -1.11
NECAP1-226ENST00000640481 HCLS1P14317 486 aaPredicted RBP8.1□□□□□ -1.11
NECAP1-226ENST00000640481 TTC39AQ5SRH9 613 aa8.1□□□□□ -1.11
NECAP1-226ENST00000640481 SUSD4Q5VX71 490 aa8.1□□□□□ -1.11
NECAP1-226ENST00000640481 USPL1Q5W0Q7 1092 aa8.1□□□□□ -1.11
NECAP1-226ENST00000640481 BLOC1S2Q6QNY1 142 aa8.1□□□□□ -1.11
NECAP1-226ENST00000640481 WNK3Q9BYP7 1800 aa8.1□□□□□ -1.11
NECAP1-226ENST00000640481 FOXD4L6Q3SYB3 417 aaPredicted RBP8.09□□□□□ -1.11
NECAP1-226ENST00000640481 FOXD4L3Q6VB84 417 aaPredicted RBP8.09□□□□□ -1.11
NECAP1-226ENST00000640481 CCDC83Q8IWF9 413 aa8.09□□□□□ -1.11
NECAP1-226ENST00000640481 HMG20BQ9P0W2 317 aa8.09□□□□□ -1.11
NECAP1-226ENST00000640481 BRPF3Q9ULD4 1205 aa8.09□□□□□ -1.11
NECAP1-226ENST00000640481 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.09□□□□□ -1.11
NECAP1-226ENST00000640481 NUP98P52948 1817 aa8.09□□□□□ -1.11
NECAP1-226ENST00000640481 RFX7Q2KHR2 1363 aa8.09□□□□□ -1.11
NECAP1-226ENST00000640481 PALLDQ8WX93 1383 aa8.09□□□□□ -1.11
NECAP1-226ENST00000640481 RPAP1Q9BWH6 1393 aaPredicted RBP8.09□□□□□ -1.11
NECAP1-226ENST00000640481 SCARF1Q14162 830 aa8.09□□□□□ -1.11
NECAP1-226ENST00000640481 ATP2B3Q16720 1220 aa8.09□□□□□ -1.11
NECAP1-226ENST00000640481 ME3Q16798 604 aa8.09□□□□□ -1.11
NECAP1-226ENST00000640481 TSGA10IPQ3SY00 556 aa8.09□□□□□ -1.11
NECAP1-226ENST00000640481 ZSCAN31Q96LW9 406 aaPredicted RBP8.09□□□□□ -1.11
NECAP1-226ENST00000640481 JCADQ9P266 1359 aa8.09□□□□□ -1.11
NECAP1-226ENST00000640481 RNF113AO15541 343 aaKnown RBP8.08□□□□□ -1.12
NECAP1-226ENST00000640481 CAMTA2O94983 1202 aa8.08□□□□□ -1.12
NECAP1-226ENST00000640481 CYP21A2P08686 494 aa8.08□□□□□ -1.12
NECAP1-226ENST00000640481 NCLP19338 710 aaKnown RBP8.08□□□□□ -1.12
NECAP1-226ENST00000640481 KCNQ4P56696 695 aa8.08□□□□□ -1.12
NECAP1-226ENST00000640481 KLHL40Q2TBA0 621 aa8.08□□□□□ -1.12
NECAP1-226ENST00000640481 ZMYM1Q5SVZ6 1142 aa8.08□□□□□ -1.12
NECAP1-226ENST00000640481 PI16Q6UXB8 463 aa8.08□□□□□ -1.12
NECAP1-226ENST00000640481 NECAB1Q8N987 351 aa8.08□□□□□ -1.12
NECAP1-226ENST00000640481 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.08□□□□□ -1.12
NECAP1-226ENST00000640481 HELLSQ9NRZ9 838 aa8.08□□□□□ -1.12
NECAP1-226ENST00000640481 TPCN1Q9ULQ1 816 aa8.08□□□□□ -1.12
NECAP1-226ENST00000640481 SMC3Q9UQE7 1217 aa8.08□□□□□ -1.12
NECAP1-226ENST00000640481 U3KPZ7 1027 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-226ENST00000640481 SH3TC1Q8TE82 1336 aa8.08□□□□□ -1.12
NECAP1-226ENST00000640481 FSD2A1L4K1 749 aa8.08□□□□□ -1.12
NECAP1-226ENST00000640481 RPS6KB1P23443 525 aa8.08□□□□□ -1.12
NECAP1-226ENST00000640481 L1TD1Q5T7N2 865 aaKnown RBP8.08□□□□□ -1.12
NECAP1-226ENST00000640481 SMARCC1Q92922 1105 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-226ENST00000640481 ZAP70P43403 619 aa8.08□□□□□ -1.12
NECAP1-226ENST00000640481 HELBQ8NG08 1087 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-226ENST00000640481 PKNOX2Q96KN3 472 aa8.08□□□□□ -1.12
NECAP1-226ENST00000640481 UTP14AQ9BVJ6 771 aaKnown RBP8.08□□□□□ -1.12
NECAP1-226ENST00000640481 SH2B1Q9NRF2 756 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-226ENST00000640481 NIP7Q9Y221 180 aaKnown RBP eCLIP8.08□□□□□ -1.12
NECAP1-226ENST00000640481 PDE8BO95263 885 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 XRCC6P12956 609 aaKnown RBP eCLIP8.07□□□□□ -1.12
NECAP1-226ENST00000640481 SYT1P21579 422 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 GJB2P29033 226 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 ST3GAL1Q11201 340 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 KRT32Q14532 448 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 VPS72Q15906 364 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 PTF1AQ7RTS3 328 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 OSBP2Q969R2 916 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 NEK1Q96PY6 1258 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 MYH14Q7Z406 1995 aaKnown RBP8.07□□□□□ -1.12
NECAP1-226ENST00000640481 WDR33Q9C0J8 1336 aaKnown RBP8.07□□□□□ -1.12
NECAP1-226ENST00000640481 BCL9LQ86UU0 1499 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 HSPD1P10809 573 aaKnown RBP8.07□□□□□ -1.12
NECAP1-226ENST00000640481 TOB2Q14106 344 aaPredicted RBP8.07□□□□□ -1.12
NECAP1-226ENST00000640481 GAS2L3Q86XJ1 694 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 VGLL2Q8N8G2 317 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 SEC31BQ9NQW1 1179 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 MAST3O60307 1309 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 RIC1Q4ADV7 1423 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 M0R2C6 588 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 STX6O43752 255 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 ANKRD1Q15327 319 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 WASHC4Q2M389 1173 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 TICAM2Q86XR7 235 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 NWD2Q9ULI1 1742 aa8.07□□□□□ -1.12
NECAP1-226ENST00000640481 ANKRD36CQ5JPF3 1778 aa8.06□□□□□ -1.12
NECAP1-226ENST00000640481 A0A0G2JLW4 131 aa8.06□□□□□ -1.12
NECAP1-226ENST00000640481 SNAP23O00161 211 aa8.06□□□□□ -1.12
NECAP1-226ENST00000640481 MCAMP43121 646 aa8.06□□□□□ -1.12
NECAP1-226ENST00000640481 PARP10Q53GL7 1025 aa8.06□□□□□ -1.12
NECAP1-226ENST00000640481 FAM182BQ5T319 152 aa8.06□□□□□ -1.12
NECAP1-226ENST00000640481 CAVIN1Q6NZI2 390 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms