RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 SAP130Q9H0E3 1048 aa9.57□□□□□ -0.88
NECAP1-220ENST00000639841 DCCP43146 1447 aa9.57□□□□□ -0.88
NECAP1-220ENST00000639841 SETD1AO15047 1707 aaKnown RBP9.56□□□□□ -0.88
NECAP1-220ENST00000639841 CCDC189A1A4V9 331 aa9.56□□□□□ -0.88
NECAP1-220ENST00000639841 ALG1LQ6GMV1 187 aa9.56□□□□□ -0.88
NECAP1-220ENST00000639841 NIF3L1Q9GZT8 377 aa9.56□□□□□ -0.88
NECAP1-220ENST00000639841 RGS17Q9UGC6 210 aaPredicted RBP9.56□□□□□ -0.88
NECAP1-220ENST00000639841 GYS2P54840 703 aa9.55□□□□□ -0.88
NECAP1-220ENST00000639841 PNISRQ8TF01 805 aaKnown RBP9.55□□□□□ -0.88
NECAP1-220ENST00000639841 SH3TC2Q8TF17 1288 aa9.55□□□□□ -0.88
NECAP1-220ENST00000639841 QTRT2Q9H974 415 aaKnown RBP9.55□□□□□ -0.88
NECAP1-220ENST00000639841 SIRPGQ9P1W8 387 aa9.55□□□□□ -0.88
NECAP1-220ENST00000639841 GGT7Q9UJ14 662 aa9.55□□□□□ -0.88
NECAP1-220ENST00000639841 COL16A1Q07092 1604 aaPredicted RBP9.55□□□□□ -0.88
NECAP1-220ENST00000639841 WDHD1O75717 1129 aaPredicted RBP9.55□□□□□ -0.88
NECAP1-220ENST00000639841 KIAA0907Q7Z7F0 614 aaPredicted RBP9.55□□□□□ -0.88
NECAP1-220ENST00000639841 PGBD3Q8N328 593 aa9.55□□□□□ -0.88
NECAP1-220ENST00000639841 PRPF38AQ8NAV1 312 aaKnown RBP9.55□□□□□ -0.88
NECAP1-220ENST00000639841 IL17RAQ96F46 866 aa9.55□□□□□ -0.88
NECAP1-220ENST00000639841 TRPM2O94759 1503 aa9.54□□□□□ -0.88
NECAP1-220ENST00000639841 ZFYVE9O95405 1425 aa9.54□□□□□ -0.88
NECAP1-220ENST00000639841 GRIPAP1Q4V328 841 aa9.54□□□□□ -0.88
NECAP1-220ENST00000639841 SLKQ9H2G2 1235 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-220ENST00000639841 BSDC1Q9NW68 430 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-220ENST00000639841 ESPNB1AK53 854 aa9.54□□□□□ -0.88
NECAP1-220ENST00000639841 TRIM6-TRIM34B2RNG4 842 aa9.54□□□□□ -0.88
NECAP1-220ENST00000639841 GNALP38405 381 aa9.54□□□□□ -0.88
NECAP1-220ENST00000639841 TCEAL9Q9UHQ7 104 aa9.54□□□□□ -0.88
NECAP1-220ENST00000639841 GPSM3Q9Y4H4 160 aa9.54□□□□□ -0.88
NECAP1-220ENST00000639841 KLF4O43474 513 aa9.53□□□□□ -0.88
NECAP1-220ENST00000639841 MASP1P48740 699 aa9.53□□□□□ -0.88
NECAP1-220ENST00000639841 IDI1Q13907 227 aa9.53□□□□□ -0.88
NECAP1-220ENST00000639841 IER5LQ5T953 404 aa9.53□□□□□ -0.88
NECAP1-220ENST00000639841 RASGRP4Q8TDF6 673 aa9.53□□□□□ -0.88
NECAP1-220ENST00000639841 DEPDC7Q96QD5 511 aa9.53□□□□□ -0.88
NECAP1-220ENST00000639841 RIMS2Q9UQ26 1411 aa9.52□□□□□ -0.88
NECAP1-220ENST00000639841 ESYT3A0FGR9 886 aa9.52□□□□□ -0.89
NECAP1-220ENST00000639841 PPP4CP60510 307 aa9.52□□□□□ -0.89
NECAP1-220ENST00000639841 CCSAPQ6IQ19 270 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-220ENST00000639841 POTEAQ6S8J7 498 aa9.52□□□□□ -0.89
NECAP1-220ENST00000639841 CNTN3Q9P232 1028 aa9.52□□□□□ -0.89
NECAP1-220ENST00000639841 UNC13BO14795 1591 aa9.52□□□□□ -0.89
NECAP1-220ENST00000639841 TMEM131LA2VDJ0 1609 aa9.52□□□□□ -0.89
NECAP1-220ENST00000639841 PTMSP20962 102 aa9.52□□□□□ -0.89
NECAP1-220ENST00000639841 ETFBP38117 255 aa9.52□□□□□ -0.89
NECAP1-220ENST00000639841 CHMP4BP1P59074 171 aa9.52□□□□□ -0.89
NECAP1-220ENST00000639841 SWT1Q5T5J6 900 aaKnown RBP9.52□□□□□ -0.89
NECAP1-220ENST00000639841 ANKS3Q6ZW76 656 aa9.52□□□□□ -0.89
NECAP1-220ENST00000639841 LILRB2Q8N423 598 aa9.52□□□□□ -0.89
NECAP1-220ENST00000639841 TMX1Q9H3N1 280 aa9.52□□□□□ -0.89
NECAP1-220ENST00000639841 RRP7BPQ9NSQ0 103 aa9.52□□□□□ -0.89
NECAP1-220ENST00000639841 V9GY48 417 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-220ENST00000639841 M0R2N6 131 aa9.51□□□□□ -0.89
NECAP1-220ENST00000639841 GALR2O43603 387 aaPredicted RBP9.51□□□□□ -0.89
NECAP1-220ENST00000639841 PLCG2P16885 1265 aa9.51□□□□□ -0.89
NECAP1-220ENST00000639841 ATP6V1AP38606 617 aa9.51□□□□□ -0.89
NECAP1-220ENST00000639841 MEX3CQ5U5Q3 659 aaKnown RBP9.51□□□□□ -0.89
NECAP1-220ENST00000639841 KRBA2Q6ZNG9 492 aa9.51□□□□□ -0.89
NECAP1-220ENST00000639841 HCLS1P14317 486 aaPredicted RBP9.5□□□□□ -0.89
NECAP1-220ENST00000639841 ATF3P18847 181 aa9.5□□□□□ -0.89
NECAP1-220ENST00000639841 PTK2Q05397 1052 aa9.5□□□□□ -0.89
NECAP1-220ENST00000639841 ARSHQ5FYA8 562 aa9.5□□□□□ -0.89
NECAP1-220ENST00000639841 ADAM32Q8TC27 787 aa9.5□□□□□ -0.89
NECAP1-220ENST00000639841 SCYL1Q96KG9 808 aa9.5□□□□□ -0.89
NECAP1-220ENST00000639841 C19orf44Q9H6X5 657 aa9.5□□□□□ -0.89
NECAP1-220ENST00000639841 HOMER2Q9NSB8 354 aa9.5□□□□□ -0.89
NECAP1-220ENST00000639841 COMMD10Q9Y6G5 202 aa9.5□□□□□ -0.89
NECAP1-220ENST00000639841 ANKRD50Q9ULJ7 1429 aa9.5□□□□□ -0.89
NECAP1-220ENST00000639841 IQGAP3Q86VI3 1631 aa9.5□□□□□ -0.89
NECAP1-220ENST00000639841 FOXO3O43524 673 aa9.5□□□□□ -0.89
NECAP1-220ENST00000639841 NR1I2O75469 434 aa9.5□□□□□ -0.89
NECAP1-220ENST00000639841 IGFBP4P22692 258 aa9.5□□□□□ -0.89
NECAP1-220ENST00000639841 CDKN1CP49918 316 aaPredicted RBP9.5□□□□□ -0.89
NECAP1-220ENST00000639841 RAB33AQ14088 237 aa9.5□□□□□ -0.89
NECAP1-220ENST00000639841 PDXDC2PQ6P474 469 aa9.5□□□□□ -0.89
NECAP1-220ENST00000639841 PACS2Q86VP3 889 aa9.5□□□□□ -0.89
NECAP1-220ENST00000639841 APPBP2Q92624 585 aa9.5□□□□□ -0.89
NECAP1-220ENST00000639841 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-220ENST00000639841 KIF4AO95239 1232 aa9.49□□□□□ -0.89
NECAP1-220ENST00000639841 SSBP05455 408 aaKnown RBP eCLIP9.49□□□□□ -0.89
NECAP1-220ENST00000639841 POTEJP0CG39 1038 aa9.49□□□□□ -0.89
NECAP1-220ENST00000639841 BDNFP23560 247 aa9.49□□□□□ -0.89
NECAP1-220ENST00000639841 AAMPQ13685 434 aa9.49□□□□□ -0.89
NECAP1-220ENST00000639841 DHX8Q14562 1220 aaKnown RBP9.49□□□□□ -0.89
NECAP1-220ENST00000639841 NKX2-3Q8TAU0 364 aa9.49□□□□□ -0.89
NECAP1-220ENST00000639841 RELTQ969Z4 430 aa9.49□□□□□ -0.89
NECAP1-220ENST00000639841 SLC26A8Q96RN1 970 aa9.49□□□□□ -0.89
NECAP1-220ENST00000639841 APBA2Q99767 749 aa9.49□□□□□ -0.89
NECAP1-220ENST00000639841 MTA3Q9BTC8 594 aa9.49□□□□□ -0.89
NECAP1-220ENST00000639841 FAM126AQ9BYI3 521 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-220ENST00000639841 CHST12Q9NRB3 414 aa9.49□□□□□ -0.89
NECAP1-220ENST00000639841 LDHAP00338 332 aaKnown RBP9.48□□□□□ -0.89
NECAP1-220ENST00000639841 PDE6BP35913 854 aa9.48□□□□□ -0.89
NECAP1-220ENST00000639841 JAMLQ86YT9 394 aa9.48□□□□□ -0.89
NECAP1-220ENST00000639841 WDR75Q8IWA0 830 aaKnown RBP9.48□□□□□ -0.89
NECAP1-220ENST00000639841 FBF1Q8TES7 1133 aa9.48□□□□□ -0.89
NECAP1-220ENST00000639841 COPRSQ9NQ92 184 aa9.48□□□□□ -0.89
NECAP1-220ENST00000639841 MRVI1Q9Y6F6 885 aa9.48□□□□□ -0.89
NECAP1-220ENST00000639841 USP31Q70CQ4 1352 aa9.48□□□□□ -0.89
NECAP1-220ENST00000639841 NFX1Q12986 1120 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms