RNA–Protein interactions for RNA: ENST00000639276.1

NECAP1-217, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,646 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-217ENST00000639276 GPR108Q9NPR9 543 aa10.72□□□□□ -0.69
NECAP1-217ENST00000639276 THRAP3Q9Y2W1 955 aaKnown RBP10.72□□□□□ -0.69
NECAP1-217ENST00000639276 DDX49Q9Y6V7 483 aaKnown RBP10.72□□□□□ -0.69
NECAP1-217ENST00000639276 HCLS1P14317 486 aaPredicted RBP10.72□□□□□ -0.69
NECAP1-217ENST00000639276 EIF5P55010 431 aaKnown RBP10.72□□□□□ -0.69
NECAP1-217ENST00000639276 CTSWP56202 376 aa10.72□□□□□ -0.69
NECAP1-217ENST00000639276 ST3GAL1Q11201 340 aa10.72□□□□□ -0.69
NECAP1-217ENST00000639276 LDHAL6AQ6ZMR3 332 aa10.72□□□□□ -0.69
NECAP1-217ENST00000639276 GAS2L3Q86XJ1 694 aa10.72□□□□□ -0.69
NECAP1-217ENST00000639276 CDCA7Q9BWT1 371 aaPredicted RBP10.72□□□□□ -0.69
NECAP1-217ENST00000639276 NUP98P52948 1817 aa10.72□□□□□ -0.69
NECAP1-217ENST00000639276 SLIT2O94813 1529 aa10.72□□□□□ -0.69
NECAP1-217ENST00000639276 UBAP1LF5GYI3 381 aa10.71□□□□□ -0.69
NECAP1-217ENST00000639276 NCLP19338 710 aaKnown RBP10.71□□□□□ -0.69
NECAP1-217ENST00000639276 ME3Q16798 604 aa10.71□□□□□ -0.69
NECAP1-217ENST00000639276 MCMDC2Q4G0Z9 681 aa10.71□□□□□ -0.69
NECAP1-217ENST00000639276 FAM182BQ5T319 152 aa10.71□□□□□ -0.69
NECAP1-217ENST00000639276 SUSD4Q5VX71 490 aa10.71□□□□□ -0.69
NECAP1-217ENST00000639276 CCDC87Q9NVE4 849 aa10.71□□□□□ -0.69
NECAP1-217ENST00000639276 TPCN1Q9ULQ1 816 aa10.71□□□□□ -0.69
NECAP1-217ENST00000639276 GOLGA6L22H0YM25 854 aa10.71□□□□□ -0.69
NECAP1-217ENST00000639276 SNAP23O00161 211 aa10.71□□□□□ -0.69
NECAP1-217ENST00000639276 GORABQ5T7V8 394 aa10.71□□□□□ -0.69
NECAP1-217ENST00000639276 ZNF34Q8IZ26 560 aa10.71□□□□□ -0.69
NECAP1-217ENST00000639276 HELBQ8NG08 1087 aaPredicted RBP10.71□□□□□ -0.69
NECAP1-217ENST00000639276 NGLY1Q96IV0 654 aa10.71□□□□□ -0.69
NECAP1-217ENST00000639276 TM6SF1Q9BZW5 370 aa10.71□□□□□ -0.69
NECAP1-217ENST00000639276 NSFL1CQ9UNZ2 370 aaKnown RBP10.71□□□□□ -0.69
NECAP1-217ENST00000639276 RIPOR2Q9Y4F9 1068 aa10.71□□□□□ -0.69
NECAP1-217ENST00000639276 FSD2A1L4K1 749 aa10.71□□□□□ -0.7
NECAP1-217ENST00000639276 GOLGA6L3A6NEY3 463 aa10.71□□□□□ -0.7
NECAP1-217ENST00000639276 XRCC6P12956 609 aaKnown RBP eCLIP10.71□□□□□ -0.7
NECAP1-217ENST00000639276 HSP90AB3PQ58FF7 597 aa10.71□□□□□ -0.7
NECAP1-217ENST00000639276 METTL24Q5JXM2 366 aa10.71□□□□□ -0.7
NECAP1-217ENST00000639276 PANK2Q9BZ23 570 aa10.71□□□□□ -0.7
NECAP1-217ENST00000639276 GDPD2Q9HCC8 539 aa10.71□□□□□ -0.7
NECAP1-217ENST00000639276 MYH14Q7Z406 1995 aaKnown RBP10.71□□□□□ -0.7
NECAP1-217ENST00000639276 CDHR2Q9BYE9 1310 aa10.7□□□□□ -0.7
NECAP1-217ENST00000639276 RPAP1Q9BWH6 1393 aaPredicted RBP10.7□□□□□ -0.7
NECAP1-217ENST00000639276 ERVV-1B6SEH8 477 aa10.7□□□□□ -0.7
NECAP1-217ENST00000639276 CYP21A2P08686 494 aa10.7□□□□□ -0.7
NECAP1-217ENST00000639276 CNNM1Q9NRU3 951 aa10.7□□□□□ -0.7
NECAP1-217ENST00000639276 EP400Q96L91 3159 aa10.7□□□□□ -0.7
NECAP1-217ENST00000639276 PALLDQ8WX93 1383 aa10.7□□□□□ -0.7
NECAP1-217ENST00000639276 JCADQ9P266 1359 aa10.7□□□□□ -0.7
NECAP1-217ENST00000639276 ZAP70P43403 619 aa10.7□□□□□ -0.7
NECAP1-217ENST00000639276 SKOR2Q2VWA4 1001 aaPredicted RBP10.7□□□□□ -0.7
NECAP1-217ENST00000639276 TTC39AQ5SRH9 613 aa10.7□□□□□ -0.7
NECAP1-217ENST00000639276 USPL1Q5W0Q7 1092 aa10.7□□□□□ -0.7
NECAP1-217ENST00000639276 BARGINQ6ZT62 677 aa10.7□□□□□ -0.7
NECAP1-217ENST00000639276 GPT2Q8TD30 523 aa10.7□□□□□ -0.7
NECAP1-217ENST00000639276 RIC1Q4ADV7 1423 aa10.69□□□□□ -0.7
NECAP1-217ENST00000639276 ANKRD18BA2A2Z9 1011 aa10.69□□□□□ -0.7
NECAP1-217ENST00000639276 PDE8AO60658 829 aa10.69□□□□□ -0.7
NECAP1-217ENST00000639276 STK3Q13188 491 aa10.69□□□□□ -0.7
NECAP1-217ENST00000639276 CCDC158Q5M9N0 1113 aa10.69□□□□□ -0.7
NECAP1-217ENST00000639276 RNF20Q5VTR2 975 aa10.69□□□□□ -0.7
NECAP1-217ENST00000639276 BLOC1S2Q6QNY1 142 aa10.69□□□□□ -0.7
NECAP1-217ENST00000639276 LRRC2Q9BYS8 371 aa10.69□□□□□ -0.7
NECAP1-217ENST00000639276 SEC31BQ9NQW1 1179 aa10.69□□□□□ -0.7
NECAP1-217ENST00000639276 RBM27Q9P2N5 1060 aaKnown RBP10.69□□□□□ -0.7
NECAP1-217ENST00000639276 M0R2C6 588 aa10.69□□□□□ -0.7
NECAP1-217ENST00000639276 CAMTA2O94983 1202 aa10.69□□□□□ -0.7
NECAP1-217ENST00000639276 RPS6KB1P23443 525 aa10.69□□□□□ -0.7
NECAP1-217ENST00000639276 TOB2Q14106 344 aaPredicted RBP10.69□□□□□ -0.7
NECAP1-217ENST00000639276 ATP2B3Q16720 1220 aa10.69□□□□□ -0.7
NECAP1-217ENST00000639276 KLHL40Q2TBA0 621 aa10.69□□□□□ -0.7
NECAP1-217ENST00000639276 TPRNQ4KMQ1 711 aa10.69□□□□□ -0.7
NECAP1-217ENST00000639276 ZMYM1Q5SVZ6 1142 aa10.69□□□□□ -0.7
NECAP1-217ENST00000639276 CAVIN1Q6NZI2 390 aaKnown RBP10.69□□□□□ -0.7
NECAP1-217ENST00000639276 STOX1Q6ZVD7 989 aa10.69□□□□□ -0.7
NECAP1-217ENST00000639276 OSBP2Q969R2 916 aa10.69□□□□□ -0.7
NECAP1-217ENST00000639276 AKAP2Q9Y2D5 859 aa10.69□□□□□ -0.7
NECAP1-217ENST00000639276 SYT1P21579 422 aa10.68□□□□□ -0.7
NECAP1-217ENST00000639276 PSMA5P28066 241 aa10.68□□□□□ -0.7
NECAP1-217ENST00000639276 GJB2P29033 226 aa10.68□□□□□ -0.7
NECAP1-217ENST00000639276 TTLL5Q6EMB2 1281 aa10.68□□□□□ -0.7
NECAP1-217ENST00000639276 SMC3Q9UQE7 1217 aa10.68□□□□□ -0.7
NECAP1-217ENST00000639276 MAST3O60307 1309 aa10.68□□□□□ -0.7
NECAP1-217ENST00000639276 ANKRD36CQ5JPF3 1778 aa10.68□□□□□ -0.7
NECAP1-217ENST00000639276 RNF113AO15541 343 aaKnown RBP10.68□□□□□ -0.7
NECAP1-217ENST00000639276 MCAMP43121 646 aa10.68□□□□□ -0.7
NECAP1-217ENST00000639276 VGLL2Q8N8G2 317 aa10.68□□□□□ -0.7
NECAP1-217ENST00000639276 SH3TC1Q8TE82 1336 aa10.68□□□□□ -0.7
NECAP1-217ENST00000639276 BCL9LQ86UU0 1499 aa10.67□□□□□ -0.7
NECAP1-217ENST00000639276 HSPD1P10809 573 aaKnown RBP10.67□□□□□ -0.7
NECAP1-217ENST00000639276 LINC00116Q8NCU8 138 aa10.67□□□□□ -0.7
NECAP1-217ENST00000639276 NIP7Q9Y221 180 aaKnown RBP eCLIP10.67□□□□□ -0.7
NECAP1-217ENST00000639276 TCHHQ07283 1943 aa10.67□□□□□ -0.7
NECAP1-217ENST00000639276 TSGA10IPQ3SY00 556 aa10.67□□□□□ -0.7
NECAP1-217ENST00000639276 NEK1Q96PY6 1258 aa10.67□□□□□ -0.7
NECAP1-217ENST00000639276 HELLSQ9NRZ9 838 aa10.67□□□□□ -0.7
NECAP1-217ENST00000639276 HMG20BQ9P0W2 317 aa10.67□□□□□ -0.7
NECAP1-217ENST00000639276 FBXO3Q9UK99 471 aa10.67□□□□□ -0.7
NECAP1-217ENST00000639276 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.67□□□□□ -0.7
NECAP1-217ENST00000639276 U3KPZ7 1027 aaPredicted RBP10.67□□□□□ -0.7
NECAP1-217ENST00000639276 STX6O43752 255 aa10.66□□□□□ -0.7
NECAP1-217ENST00000639276 PDE8BO95263 885 aa10.66□□□□□ -0.7
NECAP1-217ENST00000639276 PTMSP20962 102 aa10.66□□□□□ -0.7
NECAP1-217ENST00000639276 WASHC4Q2M389 1173 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms